RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 NODALQ96S42 347 aa16.35■□□□□ 0.21
CTTN-203ENST00000376561 POLR2J2Q9GZM3 115 aaKnown RBP16.35■□□□□ 0.21
CTTN-203ENST00000376561 TGIF2Q9GZN2 237 aa16.35■□□□□ 0.21
CTTN-203ENST00000376561 DUSP21Q9H596 190 aa16.35■□□□□ 0.21
CTTN-203ENST00000376561 IMPAD1Q9NX62 359 aa16.35■□□□□ 0.21
CTTN-203ENST00000376561 ZNF226Q9NYT6 803 aa16.35■□□□□ 0.21
CTTN-203ENST00000376561 CEPT1Q9Y6K0 416 aa16.35■□□□□ 0.21
CTTN-203ENST00000376561 IGLV3-12A0A075B6K2 115 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 CCDC160A6NGH7 325 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 VGLL3A8MV65 326 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 D6RAR5 112 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 NPIPB9F8W1W9 429 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 H3BN98 237 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 H3BSA7 217 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 NTN1O95631 604 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 IGFBP1P08833 259 aaPredicted RBP16.34■□□□□ 0.21
CTTN-203ENST00000376561 GABRB1P18505 474 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 IFNGR2P38484 337 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 CDC42P60953 191 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 SLC35A2P78381 396 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 PMS2P3Q13401 168 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 ZNF141Q15928 474 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 DECR1Q16698 335 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 RRM2BQ7LG56 351 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 GPR141Q7Z602 305 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 CCDC103Q8IW40 242 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 PLPP5Q8NEB5 264 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 STT3BQ8TCJ2 826 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 ACOT11Q8WXI4 607 aaPredicted RBP16.34■□□□□ 0.21
CTTN-203ENST00000376561 SLC7A7Q9UM01 511 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 CFL2Q9Y281 166 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 COL5A1P20908 1838 aaPredicted RBP16.34■□□□□ 0.21
CTTN-203ENST00000376561 A0A0C4DFX4 3053 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 FMO6PO60774 539 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 ATP12AP54707 1039 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.34■□□□□ 0.213e-6■■□□□ 11.4
CTTN-203ENST00000376561 NKAIN1Q4KMZ8 207 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 XAF1Q6GPH4 301 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 PRICKLE2Q7Z3G6 844 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 PPP1R3BQ86XI6 285 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 GRAMD2AQ8IUY3 354 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 TOR1AIP2Q8NFQ8 470 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 CNOT9Q92600 299 aaKnown RBP16.34■□□□□ 0.21
CTTN-203ENST00000376561 DAZLQ92904 295 aaKnown RBP16.34■□□□□ 0.21
CTTN-203ENST00000376561 EVA1AQ9H8M9 152 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 APMAPQ9HDC9 416 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 VCX3AQ9NNX9 186 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 OCIAD1Q9NX40 245 aa16.34■□□□□ 0.21
CTTN-203ENST00000376561 TESQ9UGI8 421 aaKnown RBP16.34■□□□□ 0.21
CTTN-203ENST00000376561 TRAPPC13A5PLN9 417 aa16.33■□□□□ 0.2
CTTN-203ENST00000376561 PRKNO60260 465 aaPredicted RBP16.33■□□□□ 0.2
CTTN-203ENST00000376561 FAM20BO75063 409 aa16.33■□□□□ 0.2
CTTN-203ENST00000376561 JUNBP17275 347 aaPredicted RBP16.33■□□□□ 0.2
CTTN-203ENST00000376561 PPICP45877 212 aa16.33■□□□□ 0.2
CTTN-203ENST00000376561 CSNK2BP67870 215 aa16.33■□□□□ 0.2
CTTN-203ENST00000376561 ALDH6A1Q02252 535 aaKnown RBP16.33■□□□□ 0.2
CTTN-203ENST00000376561 OR1Q1Q15612 314 aa16.33■□□□□ 0.2
CTTN-203ENST00000376561 ZBED5Q49AG3 693 aa16.33■□□□□ 0.2
CTTN-203ENST00000376561 SHISA6Q6ZSJ9 500 aa16.33■□□□□ 0.2
CTTN-203ENST00000376561 BMP8AQ7Z5Y6 402 aa16.33■□□□□ 0.2
CTTN-203ENST00000376561 ZNF540Q8NDQ6 660 aa16.33■□□□□ 0.2
CTTN-203ENST00000376561 OR14A16Q8NHC5 309 aa16.33■□□□□ 0.2
CTTN-203ENST00000376561 LMF1Q96S06 567 aa16.33■□□□□ 0.2
CTTN-203ENST00000376561 RHNO1Q9BSD3 238 aa16.33■□□□□ 0.2
CTTN-203ENST00000376561 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.33■□□□□ 0.2
CTTN-203ENST00000376561 SNX5Q9Y5X3 404 aa16.33■□□□□ 0.2
CTTN-203ENST00000376561 M0R129 80 aa16.33■□□□□ 0.2
CTTN-203ENST00000376561 KHNYNO15037 678 aaKnown RBP16.33■□□□□ 0.2
CTTN-203ENST00000376561 POLR1CO15160 346 aaPredicted RBP16.33■□□□□ 0.2
CTTN-203ENST00000376561 ZGLP1P0C6A0 271 aa16.33■□□□□ 0.2
CTTN-203ENST00000376561 GSTM3P21266 225 aa16.33■□□□□ 0.2
CTTN-203ENST00000376561 GRK6P43250 576 aa16.33■□□□□ 0.2
CTTN-203ENST00000376561 OMPP47874 163 aa16.33■□□□□ 0.2
CTTN-203ENST00000376561 PSMD4P55036 377 aaKnown RBP16.33■□□□□ 0.2
CTTN-203ENST00000376561 TEKQ02763 1124 aa16.33■□□□□ 0.2
CTTN-203ENST00000376561 FGFBP1Q14512 234 aa16.33■□□□□ 0.2
CTTN-203ENST00000376561 RAB39AQ14964 217 aa16.33■□□□□ 0.2
CTTN-203ENST00000376561 SLX4IPQ5VYV7 408 aa16.33■□□□□ 0.2
CTTN-203ENST00000376561 PIGXQ8TBF5 258 aa16.33■□□□□ 0.2
CTTN-203ENST00000376561 GNPDA2Q8TDQ7 276 aa16.33■□□□□ 0.2
CTTN-203ENST00000376561 TMEM255BQ8WV15 326 aa16.33■□□□□ 0.2
CTTN-203ENST00000376561 ATOH1Q92858 354 aaPredicted RBP16.33■□□□□ 0.2
CTTN-203ENST00000376561 LOXL4Q96JB6 756 aa16.33■□□□□ 0.2
CTTN-203ENST00000376561 ART5Q96L15 291 aa16.33■□□□□ 0.2
CTTN-203ENST00000376561 NUDT9Q9BW91 350 aa16.33■□□□□ 0.2
CTTN-203ENST00000376561 NXF5Q9H1B4 397 aaKnown RBP16.33■□□□□ 0.2
CTTN-203ENST00000376561 C11orf16Q9NQ32 467 aa16.33■□□□□ 0.2
CTTN-203ENST00000376561 DNAJB12Q9NXW2 375 aaKnown RBP16.33■□□□□ 0.2
CTTN-203ENST00000376561 ZNF883P0CG24 379 aa16.32■□□□□ 0.2
CTTN-203ENST00000376561 FOXL2P58012 376 aa16.32■□□□□ 0.2
CTTN-203ENST00000376561 DCDP81605 110 aaKnown RBP16.32■□□□□ 0.2
CTTN-203ENST00000376561 OCA2Q04671 838 aa16.32■□□□□ 0.2
CTTN-203ENST00000376561 LANCL3Q6ZV70 420 aa16.32■□□□□ 0.2
CTTN-203ENST00000376561 MEX3DQ86XN8 651 aaKnown RBP16.32■□□□□ 0.2
CTTN-203ENST00000376561 OR4C3Q8NH37 302 aa16.32■□□□□ 0.2
CTTN-203ENST00000376561 FAM46AQ96IP4 442 aaKnown RBP16.32■□□□□ 0.2
CTTN-203ENST00000376561 PRSS27Q9BQR3 290 aa16.32■□□□□ 0.2
CTTN-203ENST00000376561 CCDC90BQ9GZT6 254 aa16.32■□□□□ 0.2
CTTN-203ENST00000376561 ERVK-18Q9QC07 812 aa16.32■□□□□ 0.2
CTTN-203ENST00000376561 HBQ1P09105 142 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms