RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 ZAR1Q86SH2 424 aa12.81□□□□□ -0.36
NELFE-201ENST00000375425 GATSQ8NAP1 163 aa12.81□□□□□ -0.36
NELFE-201ENST00000375425 FNDC9Q8TBE3 224 aa12.81□□□□□ -0.36
NELFE-201ENST00000375425 MBD6Q96DN6 1003 aa12.81□□□□□ -0.36
NELFE-201ENST00000375425 MS4A4EQ96PG1 132 aa12.81□□□□□ -0.36
NELFE-201ENST00000375425 FBXO34Q9NWN3 711 aa12.81□□□□□ -0.36
NELFE-201ENST00000375425 A0A1W2PPR1 153 aa12.8□□□□□ -0.36
NELFE-201ENST00000375425 ATE1O95260 518 aa12.8□□□□□ -0.36
NELFE-201ENST00000375425 CGAP01215 116 aa12.8□□□□□ -0.36
NELFE-201ENST00000375425 RAF1P04049 648 aa12.8□□□□□ -0.36
NELFE-201ENST00000375425 ALOX5P09917 674 aa12.8□□□□□ -0.36
NELFE-201ENST00000375425 KLK2P20151 261 aa12.8□□□□□ -0.36
NELFE-201ENST00000375425 TBXA2RP21731 343 aa12.8□□□□□ -0.36
NELFE-201ENST00000375425 ARRB2P32121 409 aa12.8□□□□□ -0.36
NELFE-201ENST00000375425 RPS3AP61247 264 aaKnown RBP12.8□□□□□ -0.36
NELFE-201ENST00000375425 PPP2R2AP63151 447 aa12.8□□□□□ -0.36
NELFE-201ENST00000375425 SIRPAP78324 504 aa12.8□□□□□ -0.36
NELFE-201ENST00000375425 OCRLQ01968 901 aa12.8□□□□□ -0.36
NELFE-201ENST00000375425 SGCBQ16585 318 aa12.8□□□□□ -0.36
NELFE-201ENST00000375425 METTL25Q8N6Q8 603 aa12.8□□□□□ -0.36
NELFE-201ENST00000375425 OR7A2PQ8NGA2 310 aa12.8□□□□□ -0.36
NELFE-201ENST00000375425 OR6Y1Q8NGX8 325 aa12.8□□□□□ -0.36
NELFE-201ENST00000375425 FAM120BQ96EK7 910 aaKnown RBP12.8□□□□□ -0.36
NELFE-201ENST00000375425 OTUB1Q96FW1 271 aaPredicted RBP12.8□□□□□ -0.36
NELFE-201ENST00000375425 PPP3R2Q96LZ3 170 aa12.8□□□□□ -0.36
NELFE-201ENST00000375425 C3orf30Q96M34 536 aa12.8□□□□□ -0.36
NELFE-201ENST00000375425 WFIKKN1Q96NZ8 548 aa12.8□□□□□ -0.36
NELFE-201ENST00000375425 ROPN1BQ9BZX4 212 aaPredicted RBP12.8□□□□□ -0.36
NELFE-201ENST00000375425 OPN3Q9H1Y3 402 aaPredicted RBP12.8□□□□□ -0.36
NELFE-201ENST00000375425 ROPN1Q9HAT0 212 aaPredicted RBP12.8□□□□□ -0.36
NELFE-201ENST00000375425 SIRT3Q9NTG7 399 aaPredicted RBP12.8□□□□□ -0.36
NELFE-201ENST00000375425 STOML1Q9UBI4 398 aa12.8□□□□□ -0.36
NELFE-201ENST00000375425 LGALS13Q9UHV8 139 aa12.8□□□□□ -0.36
NELFE-201ENST00000375425 ATP6V1HQ9UI12 483 aa12.8□□□□□ -0.36
NELFE-201ENST00000375425 ZDHHC2Q9UIJ5 367 aa12.8□□□□□ -0.36
NELFE-201ENST00000375425 ZNF175Q9Y473 711 aa12.8□□□□□ -0.36
NELFE-201ENST00000375425 NIPBLQ6KC79 2804 aaeCLIP12.8□□□□□ -0.36
NELFE-201ENST00000375425 PCNX3Q9H6A9 2034 aa12.8□□□□□ -0.36
NELFE-201ENST00000375425 A0A1W2PRB8 838 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 AQP8O94778 261 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 HMGN2P05204 90 aaKnown RBP12.79□□□□□ -0.36
NELFE-201ENST00000375425 NGFRP08138 427 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 LAMP1P11279 417 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 HPGDP15428 266 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 CREB1P16220 341 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 DDX5P17844 614 aaKnown RBP12.79□□□□□ -0.36
NELFE-201ENST00000375425 MAPK1P28482 360 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 CD79BP40259 229 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 SERPINB4P48594 390 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 PCYT1AP49585 367 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 PRIM2P49643 509 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 ADAM8P78325 824 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 MLC1Q15049 377 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 DEFB113Q30KQ7 82 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 XKR7Q5GH72 579 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 CCNJQ5T5M9 372 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 GGNQ86UU5 652 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 ZNF610Q8N9Z0 462 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 NUDT8Q8WV74 236 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 JADE3Q92613 823 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 NPAS1Q99742 590 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 UBQLN4Q9NRR5 601 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 ZCCHC3Q9NUD5 404 aaKnown RBP12.79□□□□□ -0.36
NELFE-201ENST00000375425 EIF3LQ9Y262 564 aaKnown RBP12.79□□□□□ -0.36
NELFE-201ENST00000375425 SNX8Q9Y5X2 465 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 A0A087WZY1 265 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 SCDO00767 359 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 EIF1AYO14602 144 aaKnown RBP12.79□□□□□ -0.36
NELFE-201ENST00000375425 SCAMP2O15127 329 aaKnown RBP12.79□□□□□ -0.36
NELFE-201ENST00000375425 DIAPH2O60879 1101 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 OPN1LWP04000 364 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 LCN1P31025 176 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 SERPINB5P36952 375 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 HPCAL1P37235 193 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 RPL3P39023 403 aaKnown RBP12.79□□□□□ -0.36
NELFE-201ENST00000375425 EIF1AXP47813 144 aaKnown RBP12.79□□□□□ -0.36
NELFE-201ENST00000375425 KCNJ5P48544 419 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 LASP1Q14847 261 aaKnown RBP12.79□□□□□ -0.36
NELFE-201ENST00000375425 PTGR1Q14914 329 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 ATP6AP1LQ52LC2 224 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 EXOSC6Q5RKV6 272 aaKnown RBP12.79□□□□□ -0.36
NELFE-201ENST00000375425 C6orf136Q5SQH8 315 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 CPTPQ5TA50 214 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 IL23RQ5VWK5 629 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 PPP4R4Q6NUP7 873 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 WDR75Q8IWA0 830 aaKnown RBP12.79□□□□□ -0.36
NELFE-201ENST00000375425 GTPBP8Q8N3Z3 284 aaPredicted RBP12.79□□□□□ -0.36
NELFE-201ENST00000375425 COX18Q8N8Q8 333 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 ACTRT2Q8TDY3 377 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 CHMP6Q96FZ7 201 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 SH3YL1Q96HL8 342 aaPredicted RBP12.79□□□□□ -0.36
NELFE-201ENST00000375425 SLC39A3Q9BRY0 314 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 C1orf50Q9BV19 199 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 BTBD2Q9BX70 525 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 PRRG4Q9BZD6 226 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 HHATLQ9HCP6 504 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 DUSP22Q9NRW4 184 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 KLHL28Q9NXS3 571 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 ELOVL5Q9NYP7 299 aa12.79□□□□□ -0.36
NELFE-201ENST00000375425 C6orf203Q9P0P8 240 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms