RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 EQTNQ9NQ60 294 aa12.33□□□□□ -0.44
CXCL12-202ENST00000374426 STOML1Q9UBI4 398 aa12.33□□□□□ -0.44
CXCL12-202ENST00000374426 MCTS1Q9ULC4 181 aaKnown RBP12.33□□□□□ -0.44
CXCL12-202ENST00000374426 TTC36A6NLP5 189 aa12.32□□□□□ -0.44
CXCL12-202ENST00000374426 CXCL13O43927 109 aa12.32□□□□□ -0.44
CXCL12-202ENST00000374426 CRLF1O75462 422 aa12.32□□□□□ -0.44
CXCL12-202ENST00000374426 KCNH1O95259 989 aa12.32□□□□□ -0.44
CXCL12-202ENST00000374426 IFI6P09912 130 aa12.32□□□□□ -0.44
CXCL12-202ENST00000374426 PSMB1P20618 241 aaKnown RBP12.32□□□□□ -0.44
CXCL12-202ENST00000374426 ZNF844Q08AG5 666 aa12.32□□□□□ -0.44
CXCL12-202ENST00000374426 NOXRED1Q6NXP6 359 aa12.32□□□□□ -0.44
CXCL12-202ENST00000374426 BEND4Q6ZU67 534 aa12.32□□□□□ -0.44
CXCL12-202ENST00000374426 ZNF551Q7Z340 670 aaPredicted RBP12.32□□□□□ -0.44
CXCL12-202ENST00000374426 TRIM46Q7Z4K8 759 aa12.32□□□□□ -0.44
CXCL12-202ENST00000374426 WDR75Q8IWA0 830 aaKnown RBP12.32□□□□□ -0.44
CXCL12-202ENST00000374426 NOA1Q8NC60 698 aaKnown RBP12.32□□□□□ -0.44
CXCL12-202ENST00000374426 SPATA3Q8NHX4 192 aa12.32□□□□□ -0.44
CXCL12-202ENST00000374426 FAM76AQ8TAV0 307 aa12.32□□□□□ -0.44
CXCL12-202ENST00000374426 GPR151Q8TDV0 419 aa12.32□□□□□ -0.44
CXCL12-202ENST00000374426 ANP32BQ92688 251 aaKnown RBP12.32□□□□□ -0.44
CXCL12-202ENST00000374426 EGLN2Q96KS0 407 aa12.32□□□□□ -0.44
CXCL12-202ENST00000374426 KLHDC3Q9BQ90 382 aa12.32□□□□□ -0.44
CXCL12-202ENST00000374426 C3orf14Q9HBI5 128 aa12.32□□□□□ -0.44
CXCL12-202ENST00000374426 PAQR5Q9NXK6 330 aaPredicted RBP12.32□□□□□ -0.44
CXCL12-202ENST00000374426 WBP11Q9Y2W2 641 aaKnown RBP12.32□□□□□ -0.44
CXCL12-202ENST00000374426 A0A087WZY1 265 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 A0A0J9YW62 118 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 A0A1W2PRB8 838 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 C7orf72A4D263 438 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 GOLGA8RI6L899 631 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 TNFSF11O14788 317 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 NDUFB5O43674 189 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 NKX2-2O95096 273 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 SYNGR4O95473 234 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 OXSR1O95747 527 aaPredicted RBP12.31□□□□□ -0.44
CXCL12-202ENST00000374426 NGFRP08138 427 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 AGTR1P30556 359 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 RAC1P63000 192 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 HSPB3Q12988 150 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 SLC29A2Q14542 456 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 IMPG1Q17R60 797 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 PLPPR5Q32ZL2 321 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 MFSD12Q6NUT3 480 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 IKBIPQ70UQ0 350 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 ZAR1Q86SH2 424 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 MMGT1Q8N4V1 131 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 CCNYL1Q8N7R7 359 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 GATSQ8NAP1 163 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 OR2V1Q8NHB1 315 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 LILRB1Q8NHL6 650 aaPredicted RBP12.31□□□□□ -0.44
CXCL12-202ENST00000374426 RAB3IL1Q8TBN0 382 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 AKAP1Q92667 903 aaKnown RBP eCLIP12.31□□□□□ -0.44
CXCL12-202ENST00000374426 RNF145Q96MT1 663 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 OR10A4Q9H209 315 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 TMEM185BQ9H7F4 350 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 TNFRSF12AQ9NP84 129 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 GLRX2Q9NS18 164 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 MED17Q9NVC6 651 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 LAMP3Q9UQV4 416 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 GPR52Q9Y2T5 361 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 CCL27Q9Y4X3 112 aa12.31□□□□□ -0.44
CXCL12-202ENST00000374426 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.31□□□□□ -0.44
CXCL12-202ENST00000374426 FREM1Q5H8C1 2179 aa12.3□□□□□ -0.44
CXCL12-202ENST00000374426 CHD3Q12873 2000 aaKnown RBP12.3□□□□□ -0.44
CXCL12-202ENST00000374426 NBEAL1Q6ZS30 2694 aa12.3□□□□□ -0.44
CXCL12-202ENST00000374426 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.3□□□□□ -0.44
CXCL12-202ENST00000374426 RSL1D1O76021 490 aaKnown RBP12.3□□□□□ -0.44
CXCL12-202ENST00000374426 ABHD2P08910 425 aa12.3□□□□□ -0.44
CXCL12-202ENST00000374426 PRPS2P11908 318 aa12.3□□□□□ -0.44
CXCL12-202ENST00000374426 SLC18A2Q05940 514 aa12.3□□□□□ -0.44
CXCL12-202ENST00000374426 KIAA0040Q15053 153 aa12.3□□□□□ -0.44
CXCL12-202ENST00000374426 VPS26BQ4G0F5 336 aa12.3□□□□□ -0.44
CXCL12-202ENST00000374426 GLE1Q53GS7 698 aaKnown RBP12.3□□□□□ -0.44
CXCL12-202ENST00000374426 CPTPQ5TA50 214 aa12.3□□□□□ -0.44
CXCL12-202ENST00000374426 HBMQ6B0K9 141 aa12.3□□□□□ -0.44
CXCL12-202ENST00000374426 ALKBH2Q6NS38 261 aa12.3□□□□□ -0.44
CXCL12-202ENST00000374426 ANKRD26P1Q6NSI1 321 aa12.3□□□□□ -0.44
CXCL12-202ENST00000374426 ADAM5Q6NVV9 412 aa12.3□□□□□ -0.44
CXCL12-202ENST00000374426 ESPNLQ6ZVH7 1005 aa12.3□□□□□ -0.44
CXCL12-202ENST00000374426 STK32CQ86UX6 486 aa12.3□□□□□ -0.44
CXCL12-202ENST00000374426 MAPK1IP1LQ8NDC0 245 aa12.3□□□□□ -0.44
CXCL12-202ENST00000374426 FBXO30Q8TB52 745 aa12.3□□□□□ -0.44
CXCL12-202ENST00000374426 POC1BQ8TC44 478 aa12.3□□□□□ -0.44
CXCL12-202ENST00000374426 FAM110BQ8TC76 370 aa12.3□□□□□ -0.44
CXCL12-202ENST00000374426 ACTRT2Q8TDY3 377 aa12.3□□□□□ -0.44
CXCL12-202ENST00000374426 CIDECQ96AQ7 238 aaPredicted RBP12.3□□□□□ -0.44
CXCL12-202ENST00000374426 ZBTB8AQ96BR9 441 aa12.3□□□□□ -0.44
CXCL12-202ENST00000374426 S100PBPQ96BU1 408 aa12.3□□□□□ -0.44
CXCL12-202ENST00000374426 GIMAP5Q96F15 307 aa12.3□□□□□ -0.44
CXCL12-202ENST00000374426 C12orf49Q9H741 205 aa12.3□□□□□ -0.44
CXCL12-202ENST00000374426 FANCFQ9NPI8 374 aa12.3□□□□□ -0.44
CXCL12-202ENST00000374426 FBXO34Q9NWN3 711 aa12.3□□□□□ -0.44
CXCL12-202ENST00000374426 EMCNQ9ULC0 261 aa12.3□□□□□ -0.44
CXCL12-202ENST00000374426 RNF223E7ERA6 249 aa12.29□□□□□ -0.44
CXCL12-202ENST00000374426 G3V2L1 256 aa12.29□□□□□ -0.44
CXCL12-202ENST00000374426 OVOL3O00110 214 aa12.29□□□□□ -0.44
CXCL12-202ENST00000374426 PDPK1O15530 556 aa12.29□□□□□ -0.44
CXCL12-202ENST00000374426 GCM2O75603 506 aaPredicted RBP12.29□□□□□ -0.44
CXCL12-202ENST00000374426 URI1O94763 535 aaPredicted RBP12.29□□□□□ -0.44
CXCL12-202ENST00000374426 KCNK2O95069 426 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms