RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 ORAI3Q9BRQ5 295 aa14.85□□□□□ -0.03
CNKSR1-202ENST00000374253 MROQ9BYG7 248 aa14.85□□□□□ -0.03
CNKSR1-202ENST00000374253 NUAK2Q9H093 628 aa14.85□□□□□ -0.03
CNKSR1-202ENST00000374253 RACGAP1Q9H0H5 632 aa14.85□□□□□ -0.03
CNKSR1-202ENST00000374253 MED20Q9H944 212 aa14.85□□□□□ -0.03
CNKSR1-202ENST00000374253 ANKHQ9HCJ1 492 aa14.85□□□□□ -0.03
CNKSR1-202ENST00000374253 DTX4Q9Y2E6 619 aa14.85□□□□□ -0.03
CNKSR1-202ENST00000374253 PRODHO43272 600 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 SDC3O75056 442 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 CBX7O95931 251 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 WNT1P04628 370 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 MTNR1AP48039 350 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 PPP5CP53041 499 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 BTG2P78543 158 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 OR1Q1Q15612 314 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 DECR1Q16698 335 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 PARP16Q8N5Y8 322 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 CDRT4Q8N9R6 151 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 PROKR2Q8NFJ6 384 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 TSTD1Q8NFU3 115 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 HTRA1Q92743 480 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 PTCHD1Q96NR3 888 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 PRSS27Q9BQR3 290 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 BARHL1Q9BZE3 327 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 LMAN1LQ9HAT1 526 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 TBCCD1Q9NVR7 557 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 POMT2Q9UKY4 750 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 DIMT1Q9UNQ2 313 aaKnown RBP14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 SOCS6O14544 535 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 GNB5O14775 395 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 RGS5O15539 181 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 PLOD3O60568 738 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 OR5F1O95221 314 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 AGR2O95994 175 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 MYL12AP19105 171 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 MAKP20794 623 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 PSMA1P25786 263 aaKnown RBP14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 GCGRP47871 477 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 CDH11P55287 796 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 C1DQ13901 141 aaKnown RBP14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 ZNF620Q6ZNG0 422 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 MCATQ8IVS2 390 aaKnown RBP14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 C19orf47Q8N9M1 422 aaKnown RBP14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 POGLUT1Q8NBL1 392 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 TM9SF2Q99805 663 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 TTYH1Q9H313 450 aaPredicted RBP14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 CABIN1Q9Y6J0 2220 aa14.84□□□□□ -0.03
CNKSR1-202ENST00000374253 MUC3AQ02505 3323 aa14.83□□□□□ -0.03
CNKSR1-202ENST00000374253 CCDC85CA6NKD9 419 aa14.83□□□□□ -0.04
CNKSR1-202ENST00000374253 ADAM11O75078 769 aa14.83□□□□□ -0.04
CNKSR1-202ENST00000374253 CLEC2LP0C7M8 214 aa14.83□□□□□ -0.04
CNKSR1-202ENST00000374253 CHRNB1P11230 501 aa14.83□□□□□ -0.04
CNKSR1-202ENST00000374253 FPR3P25089 353 aa14.83□□□□□ -0.04
CNKSR1-202ENST00000374253 CCR5P51681 352 aa14.83□□□□□ -0.04
CNKSR1-202ENST00000374253 CSTF1Q05048 431 aaKnown RBP14.83□□□□□ -0.04
CNKSR1-202ENST00000374253 LRIT3Q3SXY7 679 aa14.83□□□□□ -0.04
CNKSR1-202ENST00000374253 TIMM50Q3ZCQ8 353 aa14.83□□□□□ -0.04
CNKSR1-202ENST00000374253 PDZK1Q5T2W1 519 aa14.83□□□□□ -0.04
CNKSR1-202ENST00000374253 C22orf42Q6IC83 251 aa14.83□□□□□ -0.04
CNKSR1-202ENST00000374253 VWA5B2Q8N398 1253 aa14.83□□□□□ -0.04
CNKSR1-202ENST00000374253 LMX1AQ8TE12 382 aa14.83□□□□□ -0.04
CNKSR1-202ENST00000374253 CNOT9Q92600 299 aaKnown RBP14.83□□□□□ -0.04
CNKSR1-202ENST00000374253 SEMA6CQ9H3T2 930 aa14.83□□□□□ -0.04
CNKSR1-202ENST00000374253 OR5K4A6NMS3 321 aa14.83□□□□□ -0.04
CNKSR1-202ENST00000374253 SURF4O15260 269 aa14.83□□□□□ -0.04
CNKSR1-202ENST00000374253 ZGLP1P0C6A0 271 aa14.83□□□□□ -0.04
CNKSR1-202ENST00000374253 IFI30P13284 250 aa14.83□□□□□ -0.04
CNKSR1-202ENST00000374253 NID1P14543 1247 aa14.83□□□□□ -0.04
CNKSR1-202ENST00000374253 GFERP55789 205 aa14.83□□□□□ -0.04
CNKSR1-202ENST00000374253 RPS25P62851 125 aaKnown RBP14.83□□□□□ -0.04
CNKSR1-202ENST00000374253 POU6F2P78424 691 aaPredicted RBP14.83□□□□□ -0.04
CNKSR1-202ENST00000374253 CARTPTQ16568 116 aa14.83□□□□□ -0.04
CNKSR1-202ENST00000374253 STEAP3Q658P3 488 aa14.83□□□□□ -0.04
CNKSR1-202ENST00000374253 RANBP3LQ86VV4 465 aaPredicted RBP14.83□□□□□ -0.04
CNKSR1-202ENST00000374253 SYT14Q8NB59 555 aa14.83□□□□□ -0.04
CNKSR1-202ENST00000374253 CCDC59Q9P031 241 aaKnown RBP14.83□□□□□ -0.04
CNKSR1-202ENST00000374253 ZNF229Q9UJW7 825 aa14.83□□□□□ -0.04
CNKSR1-202ENST00000374253 CDHR4A6H8M9 788 aa14.82□□□□□ -0.04
CNKSR1-202ENST00000374253 AGRPO00253 132 aa14.82□□□□□ -0.04
CNKSR1-202ENST00000374253 LALBAP00709 142 aa14.82□□□□□ -0.04
CNKSR1-202ENST00000374253 DBIP07108 87 aaKnown RBP14.82□□□□□ -0.04
CNKSR1-202ENST00000374253 TSPAN19P0C672 248 aa14.82□□□□□ -0.04
CNKSR1-202ENST00000374253 MAOAP21397 527 aa14.82□□□□□ -0.04
CNKSR1-202ENST00000374253 TGM1P22735 817 aa14.82□□□□□ -0.04
CNKSR1-202ENST00000374253 SOX6P35712 828 aa14.82□□□□□ -0.04
CNKSR1-202ENST00000374253 EMDP50402 254 aa14.82□□□□□ -0.04
CNKSR1-202ENST00000374253 PGDP52209 483 aa14.82□□□□□ -0.04
CNKSR1-202ENST00000374253 RAB38P57729 211 aa14.82□□□□□ -0.04
CNKSR1-202ENST00000374253 PGGHGQ32M88 737 aa14.82□□□□□ -0.04
CNKSR1-202ENST00000374253 ZNF791Q3KP31 576 aaPredicted RBP14.82□□□□□ -0.04
CNKSR1-202ENST00000374253 TBC1D25Q3MII6 688 aa14.82□□□□□ -0.04
CNKSR1-202ENST00000374253 NKAIN2Q5VXU1 208 aa14.82□□□□□ -0.04
CNKSR1-202ENST00000374253 NIPAL1Q6NVV3 410 aa14.82□□□□□ -0.04
CNKSR1-202ENST00000374253 PLEKHG7Q6ZR37 379 aa14.82□□□□□ -0.04
CNKSR1-202ENST00000374253 LINC00299Q6ZSB3 139 aa14.82□□□□□ -0.04
CNKSR1-202ENST00000374253 CPOQ8IVL8 374 aa14.82□□□□□ -0.04
CNKSR1-202ENST00000374253 GJD3Q8N144 294 aa14.82□□□□□ -0.04
CNKSR1-202ENST00000374253 ARL14Q8N4G2 192 aa14.82□□□□□ -0.04
CNKSR1-202ENST00000374253 NXF2Q9GZY0 626 aaKnown RBP14.82□□□□□ -0.04
CNKSR1-202ENST00000374253 NDUFB11Q9NX14 153 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms