RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 FIGNL1Q6PIW4 674 aa16.21■□□□□ 0.19
TRAPPC3-202ENST00000373162 SPNS3Q6ZMD2 512 aa16.21■□□□□ 0.19
TRAPPC3-202ENST00000373162 NATD1Q8N6N6 113 aa16.21■□□□□ 0.19
TRAPPC3-202ENST00000373162 METTL25Q8N6Q8 603 aa16.21■□□□□ 0.19
TRAPPC3-202ENST00000373162 GOT1L1Q8NHS2 421 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC3-202ENST00000373162 SFXN5Q8TD22 340 aa16.21■□□□□ 0.19
TRAPPC3-202ENST00000373162 FAM222BQ8WU58 562 aa16.21■□□□□ 0.19
TRAPPC3-202ENST00000373162 TUBGCP3Q96CW5 907 aa16.21■□□□□ 0.19
TRAPPC3-202ENST00000373162 BTBD2Q9BX70 525 aa16.21■□□□□ 0.19
TRAPPC3-202ENST00000373162 TBL1XR1Q9BZK7 514 aa16.21■□□□□ 0.19
TRAPPC3-202ENST00000373162 BHLHE41Q9C0J9 482 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC3-202ENST00000373162 SERHL2Q9H4I8 314 aa16.21■□□□□ 0.19
TRAPPC3-202ENST00000373162 RASSF1Q9NS23 344 aa16.21■□□□□ 0.19
TRAPPC3-202ENST00000373162 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC3-202ENST00000373162 RAP2CQ9Y3L5 183 aa16.21■□□□□ 0.19
TRAPPC3-202ENST00000373162 TNFRSF21O75509 655 aa16.2■□□□□ 0.18
TRAPPC3-202ENST00000373162 C6orf47O95873 294 aa16.2■□□□□ 0.18
TRAPPC3-202ENST00000373162 CRHP06850 196 aa16.2■□□□□ 0.18
TRAPPC3-202ENST00000373162 ALOX5P09917 674 aa16.2■□□□□ 0.18
TRAPPC3-202ENST00000373162 NID1P14543 1247 aa16.2■□□□□ 0.18
TRAPPC3-202ENST00000373162 ZNF17P17021 662 aa16.2■□□□□ 0.18
TRAPPC3-202ENST00000373162 DDX5P17844 614 aaKnown RBP16.2■□□□□ 0.18
TRAPPC3-202ENST00000373162 RFX3P48380 749 aa16.2■□□□□ 0.18
TRAPPC3-202ENST00000373162 PRIM2P49643 509 aa16.2■□□□□ 0.18
TRAPPC3-202ENST00000373162 CTU2Q2VPK5 515 aaKnown RBP16.2■□□□□ 0.18
TRAPPC3-202ENST00000373162 CCNJQ5T5M9 372 aa16.2■□□□□ 0.18
TRAPPC3-202ENST00000373162 CPTPQ5TA50 214 aa16.2■□□□□ 0.18
TRAPPC3-202ENST00000373162 RAET1LQ5VY80 246 aa16.2■□□□□ 0.18
TRAPPC3-202ENST00000373162 GCNT2Q8N0V5 402 aa16.2■□□□□ 0.18
TRAPPC3-202ENST00000373162 OR5M1Q8NGP8 315 aa16.2■□□□□ 0.18
TRAPPC3-202ENST00000373162 FIG4Q92562 907 aa16.2■□□□□ 0.18
TRAPPC3-202ENST00000373162 NRGNQ92686 78 aa16.2■□□□□ 0.18
TRAPPC3-202ENST00000373162 CDS1Q92903 461 aa16.2■□□□□ 0.18
TRAPPC3-202ENST00000373162 INTS12Q96CB8 462 aaKnown RBP16.2■□□□□ 0.18
TRAPPC3-202ENST00000373162 ADGRG7Q96K78 797 aa16.2■□□□□ 0.18
TRAPPC3-202ENST00000373162 YIPF4Q9BSR8 244 aa16.2■□□□□ 0.18
TRAPPC3-202ENST00000373162 PTGES2Q9H7Z7 377 aa16.2■□□□□ 0.18
TRAPPC3-202ENST00000373162 RNF122Q9H9V4 155 aa16.2■□□□□ 0.18
TRAPPC3-202ENST00000373162 NEUROD4Q9HD90 331 aa16.2■□□□□ 0.18
TRAPPC3-202ENST00000373162 ZNF175Q9Y473 711 aa16.2■□□□□ 0.18
TRAPPC3-202ENST00000373162 KCNE3Q9Y6H6 103 aa16.2■□□□□ 0.18
TRAPPC3-202ENST00000373162 NF1P21359 2839 aa16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 A6NNC1 897 aa16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 A8MXE2 369 aa16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 SHISA8B8ZZ34 492 aa16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 SNUPNO95149 360 aaKnown RBP16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 HSPA4LO95757 839 aa16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 CCT3P49368 545 aaKnown RBP16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 CLK3P49761 638 aaKnown RBP16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 HBA1P69905 142 aa16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 PHC1P78364 1004 aa16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 POU6F2P78424 691 aaPredicted RBP16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 PLPPR5Q32ZL2 321 aa16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 CEP85LQ5SZL2 805 aa16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 GRAMD2AQ8IUY3 354 aa16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 LRRC34Q8IZ02 419 aa16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 GTPBP8Q8N3Z3 284 aaPredicted RBP16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 COX18Q8N8Q8 333 aa16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 OR56A1Q8NGH5 318 aa16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 POC1BQ8TC44 478 aa16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 ACTRT2Q8TDY3 377 aa16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 STARD4Q96DR4 205 aa16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 PIGQQ9BRB3 760 aa16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 GPATCH1Q9BRR8 931 aaKnown RBP16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 DUSP26Q9BV47 211 aa16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 ACTRT3Q9BYD9 372 aa16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 ACBD3Q9H3P7 528 aa16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 PIGMQ9H3S5 423 aa16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 AKTIPQ9H8T0 292 aa16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 UBQLN4Q9NRR5 601 aa16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 ATAD3AQ9NVI7 634 aa16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 GALNT8Q9NY28 637 aa16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 NOP53Q9NZM5 478 aaKnown RBP16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 AP4B1Q9Y6B7 739 aa16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 AKAP6Q13023 2319 aa16.19■□□□□ 0.18
TRAPPC3-202ENST00000373162 MPDZO75970 2070 aa16.18■□□□□ 0.18
TRAPPC3-202ENST00000373162 WDR91A4D1P6 747 aa16.18■□□□□ 0.18
TRAPPC3-202ENST00000373162 EEF1E1-BLOC1S5C9J1V9 151 aa16.18■□□□□ 0.18
TRAPPC3-202ENST00000373162 EEF1E1O43324 174 aaKnown RBP16.18■□□□□ 0.18
TRAPPC3-202ENST00000373162 OIP5O43482 229 aa16.18■□□□□ 0.18
TRAPPC3-202ENST00000373162 NDUFB5O43674 189 aa16.18■□□□□ 0.18
TRAPPC3-202ENST00000373162 ZWINTO95229 277 aa16.18■□□□□ 0.18
TRAPPC3-202ENST00000373162 CGAP01215 116 aa16.18■□□□□ 0.18
TRAPPC3-202ENST00000373162 BGNP21810 368 aa16.18■□□□□ 0.18
TRAPPC3-202ENST00000373162 DNAJA1P31689 397 aaKnown RBP16.18■□□□□ 0.18
TRAPPC3-202ENST00000373162 KIR2DL2P43627 348 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC3-202ENST00000373162 WDR4P57081 412 aaKnown RBP16.18■□□□□ 0.18
TRAPPC3-202ENST00000373162 MAD2L1Q13257 205 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC3-202ENST00000373162 PDCD2Q16342 344 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC3-202ENST00000373162 AP1ARQ63HQ0 302 aa16.18■□□□□ 0.18
TRAPPC3-202ENST00000373162 TMEM200AQ86VY9 491 aa16.18■□□□□ 0.18
TRAPPC3-202ENST00000373162 OR8J2Q8NGG1 315 aa16.18■□□□□ 0.18
TRAPPC3-202ENST00000373162 ZNF845Q96IR2 970 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC3-202ENST00000373162 MED17Q9NVC6 651 aa16.18■□□□□ 0.18
TRAPPC3-202ENST00000373162 PACSIN3Q9UKS6 424 aa16.18■□□□□ 0.18
TRAPPC3-202ENST00000373162 ABCA4P78363 2273 aa16.17■□□□□ 0.18
TRAPPC3-202ENST00000373162 PRRC2AP48634 2157 aaKnown RBP16.17■□□□□ 0.18
TRAPPC3-202ENST00000373162 A0A087WZY1 265 aa16.17■□□□□ 0.18
TRAPPC3-202ENST00000373162 SLC22A20A6NK97 555 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms