RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 FOXD4Q12950 439 aaPredicted RBP14.87□□□□□ -0.03
C9orf78-201ENST00000372447 GTF2IRD2BQ6EKJ0 949 aa14.87□□□□□ -0.03
C9orf78-201ENST00000372447 GTF2IRD2Q86UP8 949 aa14.87□□□□□ -0.03
C9orf78-201ENST00000372447 COMTD1Q86VU5 262 aa14.87□□□□□ -0.03
C9orf78-201ENST00000372447 APH1BQ8WW43 257 aa14.87□□□□□ -0.03
C9orf78-201ENST00000372447 GTPBP3Q969Y2 492 aaKnown RBP14.87□□□□□ -0.03
C9orf78-201ENST00000372447 MS4A4EQ96PG1 132 aa14.87□□□□□ -0.03
C9orf78-201ENST00000372447 TRNT1Q96Q11 434 aaKnown RBP14.87□□□□□ -0.03
C9orf78-201ENST00000372447 OR1F2PQ96R84 312 aa14.87□□□□□ -0.03
C9orf78-201ENST00000372447 WDR54Q9H977 334 aa14.87□□□□□ -0.03
C9orf78-201ENST00000372447 GPN2Q9H9Y4 310 aaPredicted RBP14.87□□□□□ -0.03
C9orf78-201ENST00000372447 LIN28AQ9H9Z2 209 aaKnown RBP14.87□□□□□ -0.03
C9orf78-201ENST00000372447 CALML5Q9NZT1 146 aa14.87□□□□□ -0.03
C9orf78-201ENST00000372447 TCFL5Q9UL49 500 aa14.87□□□□□ -0.03
C9orf78-201ENST00000372447 RNF6Q9Y252 685 aa14.87□□□□□ -0.03
C9orf78-201ENST00000372447 SLC9A8Q9Y2E8 581 aa14.87□□□□□ -0.03
C9orf78-201ENST00000372447 PCDHGB1Q9Y5G3 927 aa14.87□□□□□ -0.03
C9orf78-201ENST00000372447 URB1O60287 2271 aaKnown RBP14.86□□□□□ -0.03
C9orf78-201ENST00000372447 DUXAA6NLW8 204 aa14.86□□□□□ -0.03
C9orf78-201ENST00000372447 M0R3H8 397 aa14.86□□□□□ -0.03
C9orf78-201ENST00000372447 TAF4O00268 1085 aa14.86□□□□□ -0.03
C9orf78-201ENST00000372447 KLK10O43240 276 aa14.86□□□□□ -0.03
C9orf78-201ENST00000372447 CDC123O75794 336 aaPredicted RBP14.86□□□□□ -0.03
C9orf78-201ENST00000372447 LGI1O95970 557 aa14.86□□□□□ -0.03
C9orf78-201ENST00000372447 CPMP14384 443 aa14.86□□□□□ -0.03
C9orf78-201ENST00000372447 LIFP15018 202 aa14.86□□□□□ -0.03
C9orf78-201ENST00000372447 PORP16435 677 aaPredicted RBP14.86□□□□□ -0.03
C9orf78-201ENST00000372447 ELAVL4P26378 380 aaKnown RBP14.86□□□□□ -0.03
C9orf78-201ENST00000372447 KRT20P35900 424 aa14.86□□□□□ -0.03
C9orf78-201ENST00000372447 EFNA3P52797 238 aa14.86□□□□□ -0.03
C9orf78-201ENST00000372447 SMIM11AP58511 58 aa14.86□□□□□ -0.03
C9orf78-201ENST00000372447 NPTX1Q15818 432 aa14.86□□□□□ -0.03
C9orf78-201ENST00000372447 SMN1Q16637 294 aaKnown RBP14.86□□□□□ -0.03
C9orf78-201ENST00000372447 FGD3Q5JSP0 725 aa14.86□□□□□ -0.03
C9orf78-201ENST00000372447 DCST1Q5T197 706 aa14.86□□□□□ -0.03
C9orf78-201ENST00000372447 ATAD3BQ5T9A4 648 aa14.86□□□□□ -0.03
C9orf78-201ENST00000372447 FAM111BQ6SJ93 734 aa14.86□□□□□ -0.03
C9orf78-201ENST00000372447 OR2L13Q8N349 312 aa14.86□□□□□ -0.03
C9orf78-201ENST00000372447 ZNF540Q8NDQ6 660 aa14.86□□□□□ -0.03
C9orf78-201ENST00000372447 TMEM52Q8NDY8 209 aa14.86□□□□□ -0.03
C9orf78-201ENST00000372447 FAM81AQ8TBF8 368 aa14.86□□□□□ -0.03
C9orf78-201ENST00000372447 MUL1Q969V5 352 aa14.86□□□□□ -0.03
C9orf78-201ENST00000372447 KIAA1143Q96AT1 154 aaPredicted RBP14.86□□□□□ -0.03
C9orf78-201ENST00000372447 PINK1Q9BXM7 581 aa14.86□□□□□ -0.03
C9orf78-201ENST00000372447 DPH1Q9BZG8 443 aa14.86□□□□□ -0.03
C9orf78-201ENST00000372447 LANCL2Q9NS86 450 aa14.86□□□□□ -0.03
C9orf78-201ENST00000372447 GIN1Q9NXP7 522 aa14.86□□□□□ -0.03
C9orf78-201ENST00000372447 PTGFRNQ9P2B2 879 aa14.86□□□□□ -0.03
C9orf78-201ENST00000372447 ERVK-18Q9QC07 812 aa14.86□□□□□ -0.03
C9orf78-201ENST00000372447 PTRH2Q9Y3E5 179 aaKnown RBP14.86□□□□□ -0.03
C9orf78-201ENST00000372447 H3BMQ9 156 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 FAAHO00519 579 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 FAM20BO75063 409 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 OXSR1O95747 527 aaPredicted RBP14.85□□□□□ -0.03
C9orf78-201ENST00000372447 EPPINO95925 133 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 CD63P08962 238 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 GSSP48637 474 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 CSNK2BP67870 215 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 MFSD12Q6NUT3 480 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 MED25Q71SY5 747 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 C16orf62Q7Z3J2 963 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 HMGN2P46Q86SG4 172 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 DEPDC4Q8N2C3 294 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 ADAMTS15Q8TE58 950 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 COG8Q96MW5 612 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 FAM117AQ9C073 453 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 SLC38A1Q9H2H9 487 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 CCNB1IP1Q9NPC3 277 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 C14orf105Q9NVL8 296 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 NXT1Q9UKK6 140 aaKnown RBP14.85□□□□□ -0.03
C9orf78-201ENST00000372447 MKL2Q9ULH7 1088 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 A4GNTQ9UNA3 340 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 RAXQ9Y2V3 346 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 CCDC88CQ9P219 2028 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 MRPS14O60783 128 aaKnown RBP14.85□□□□□ -0.03
C9orf78-201ENST00000372447 NME6O75414 186 aaPredicted RBP14.85□□□□□ -0.03
C9orf78-201ENST00000372447 UGT2B17O75795 530 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 ADAP00813 363 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 UMODP07911 640 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 BTG2P78543 158 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 EMX1Q04741 257 aaPredicted RBP14.85□□□□□ -0.03
C9orf78-201ENST00000372447 CHRNEQ04844 493 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 SEC23BQ15437 767 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 MINDY4Q4G0A6 757 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 CDC73Q6P1J9 531 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 KLHL17Q6TDP4 642 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 P3H2Q8IVL5 708 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 OR2Y1Q8NGV0 311 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 RHOXF1Q8NHV9 184 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 IPCEF1Q8WWN9 437 aaPredicted RBP14.85□□□□□ -0.03
C9orf78-201ENST00000372447 SLC35A4Q96G79 324 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 NAA50Q9GZZ1 169 aaKnown RBP14.85□□□□□ -0.03
C9orf78-201ENST00000372447 QRSL1Q9H0R6 528 aaKnown RBP14.85□□□□□ -0.03
C9orf78-201ENST00000372447 MGAT4BQ9UQ53 548 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 SSUH2Q9Y2M2 353 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 DSPPQ9NZW4 1301 aa14.85□□□□□ -0.03
C9orf78-201ENST00000372447 IDSB3KWA1 339 aa14.84□□□□□ -0.03
C9orf78-201ENST00000372447 EFSO43281 561 aa14.84□□□□□ -0.03
C9orf78-201ENST00000372447 NOL3O60936 208 aaKnown RBP14.84□□□□□ -0.03
C9orf78-201ENST00000372447 AGR2O95994 175 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms