RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 J3QKU1 62 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 AP3D1O14617 1153 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 PLOD3O60568 738 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 GALR3O60755 368 aaPredicted RBP13.09□□□□□ -0.31
LDB3-204ENST00000372066 OR5F1O95221 314 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 ADORA3P0DMS8 318 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 POU1F1P28069 291 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 NUDT6P53370 316 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 RAB38P57729 211 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 HHEXQ03014 270 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 CHRNEQ04844 493 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 ZNF846Q147U1 533 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 LARS2Q15031 903 aaKnown RBP13.09□□□□□ -0.31
LDB3-204ENST00000372066 TIMM50Q3ZCQ8 353 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 FHL5Q5TD97 284 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 PLAG1Q6DJT9 500 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 FAM111BQ6SJ93 734 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 FRRS1Q6ZNA5 592 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 SLC46A3Q7Z3Q1 461 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 COMTD1Q86VU5 262 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 CDRT4Q8N9R6 151 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 OR52P1PQ8NH57 321 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 DYNC2LI1Q8TCX1 351 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 ADAMTS18Q8TE60 1221 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 SLC35A4Q96G79 324 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 PIGUQ9H490 435 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 HMG20AQ9NP66 347 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 POLE3Q9NRF9 147 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 DUSP22Q9NRW4 184 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 GPR83Q9NYM4 423 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 WDR45Q9Y484 360 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 KCNE3Q9Y6H6 103 aa13.09□□□□□ -0.31
LDB3-204ENST00000372066 CCDC187A0A096LP49 1063 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 LOC105369274A0A096LPK9 316 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 LOC102723532A0A0G2JNH3 316 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 A0A1W2PS29 197 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 CDRT15L2A8MXV6 281 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 EFCAB9A8MZ26 197 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 FAM227AF5H4B4 570 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 K7ENP7 123 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 CYP7B1O75881 506 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 GPR75O95800 540 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 RPLP0P05388 317 aaKnown RBP13.08□□□□□ -0.32
LDB3-204ENST00000372066 CELA2BP08218 269 aaPredicted RBP13.08□□□□□ -0.32
LDB3-204ENST00000372066 STSP08842 583 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 ALOX5P09917 674 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 CCNYL3P0C7X3 344 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 FUT4P22083 530 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 MMP11P24347 488 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 C21orf33P30042 268 aaPredicted RBP13.08□□□□□ -0.32
LDB3-204ENST00000372066 SMSP52788 366 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 DUSP8Q13202 625 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 ELOCQ15369 112 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 MFSD4BQ5TF39 518 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 INO80CQ6PI98 192 aaPredicted RBP13.08□□□□□ -0.32
LDB3-204ENST00000372066 OR4N4Q8N0Y3 316 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 FAM26EQ8N5C1 309 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 KBTBD8Q8NFY9 601 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 FNDC8Q8TC99 324 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 ZDHHC1Q8WTX9 485 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 SNRNP27Q8WVK2 155 aaKnown RBP13.08□□□□□ -0.32
LDB3-204ENST00000372066 TTC9Q92623 222 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 DIO2Q92813 273 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 LGALS12Q96DT0 336 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 OTUB1Q96FW1 271 aaPredicted RBP13.08□□□□□ -0.32
LDB3-204ENST00000372066 SEMA4CQ9C0C4 833 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 KRCC1Q9NPI7 259 aaPredicted RBP13.08□□□□□ -0.32
LDB3-204ENST00000372066 ZNF443Q9Y2A4 671 aaPredicted RBP13.08□□□□□ -0.32
LDB3-204ENST00000372066 SSUH2Q9Y2M2 353 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 A3GALT2U3KPV4 340 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 MGAQ8IWI9 3026 aa13.08□□□□□ -0.32
LDB3-204ENST00000372066 FLNBO75369 2602 aaKnown RBP13.08□□□□□ -0.32
LDB3-204ENST00000372066 A0A1B0GVG6 124 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 SNTNA6NMZ2 147 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 CLDN25C9JDP6 229 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 AIREO43918 545 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 MAN1A2O60476 641 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 COQ9O75208 318 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 TP53P04637 393 aaPredicted RBP13.07□□□□□ -0.32
LDB3-204ENST00000372066 GUSBP08236 651 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 ZNF12P17014 697 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 MLLT3P42568 568 aaPredicted RBP13.07□□□□□ -0.32
LDB3-204ENST00000372066 CLK1P49759 484 aaKnown RBP13.07□□□□□ -0.32
LDB3-204ENST00000372066 BMXP51813 675 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 RGS8P57771 180 aaPredicted RBP13.07□□□□□ -0.32
LDB3-204ENST00000372066 CDK5Q00535 292 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 RHAGQ02094 409 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 TSPAN31Q12999 210 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 NCF4Q15080 339 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 DECR1Q16698 335 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 TMEM44Q2T9K0 475 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 TMEM236Q5W0B7 351 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 RASSF6Q6ZTQ3 369 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 ZER1Q7Z7L7 766 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 ADCK1Q86TW2 530 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 CA13Q8N1Q1 262 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 SLC16A11Q8NCK7 471 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 PIGXQ8TBF5 258 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 PATE1Q8WXA2 126 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 CDS1Q92903 461 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms