RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 RHBDD1Q8TEB9 315 aa16.19■□□□□ 0.18
SSBP3-203ENST00000371319 CNOT9Q92600 299 aaKnown RBP16.19■□□□□ 0.18
SSBP3-203ENST00000371319 LMF1Q96S06 567 aa16.19■□□□□ 0.18
SSBP3-203ENST00000371319 GPA33Q99795 319 aa16.19■□□□□ 0.18
SSBP3-203ENST00000371319 CTRCQ99895 268 aa16.19■□□□□ 0.18
SSBP3-203ENST00000371319 C14orf105Q9NVL8 296 aa16.19■□□□□ 0.18
SSBP3-203ENST00000371319 CFL2Q9Y281 166 aa16.19■□□□□ 0.18
SSBP3-203ENST00000371319 SYNDIG1LA6NDD5 238 aa16.18■□□□□ 0.18
SSBP3-203ENST00000371319 FAM86C2PA6NEL3 165 aa16.18■□□□□ 0.18
SSBP3-203ENST00000371319 FRG2CA6NGY1 282 aa16.18■□□□□ 0.18
SSBP3-203ENST00000371319 VSTM2BA6NLU5 285 aa16.18■□□□□ 0.18
SSBP3-203ENST00000371319 GDF9O60383 454 aa16.18■□□□□ 0.18
SSBP3-203ENST00000371319 FMO6PO60774 539 aa16.18■□□□□ 0.18
SSBP3-203ENST00000371319 OR6B1O95007 311 aa16.18■□□□□ 0.18
SSBP3-203ENST00000371319 IGFBP1P08833 259 aaPredicted RBP16.18■□□□□ 0.18
SSBP3-203ENST00000371319 CCDC159P0C7I6 412 aa16.18■□□□□ 0.18
SSBP3-203ENST00000371319 IFNA8P32881 189 aa16.18■□□□□ 0.18
SSBP3-203ENST00000371319 PSMD4P55036 377 aaKnown RBP16.18■□□□□ 0.18
SSBP3-203ENST00000371319 OCA2Q04671 838 aa16.18■□□□□ 0.18
SSBP3-203ENST00000371319 ILKQ13418 452 aa16.18■□□□□ 0.18
SSBP3-203ENST00000371319 IL11RAQ14626 422 aa16.18■□□□□ 0.18
SSBP3-203ENST00000371319 PTGES3Q15185 160 aaKnown RBP16.18■□□□□ 0.18
SSBP3-203ENST00000371319 OR1Q1Q15612 314 aa16.18■□□□□ 0.18
SSBP3-203ENST00000371319 DECR1Q16698 335 aa16.18■□□□□ 0.18
SSBP3-203ENST00000371319 OVCH1Q7RTY7 1134 aa16.18■□□□□ 0.18
SSBP3-203ENST00000371319 PRICKLE2Q7Z3G6 844 aa16.18■□□□□ 0.18
SSBP3-203ENST00000371319 GRAMD2AQ8IUY3 354 aa16.18■□□□□ 0.18
SSBP3-203ENST00000371319 C9orf40Q8IXQ3 194 aa16.18■□□□□ 0.18
SSBP3-203ENST00000371319 FAM81AQ8TBF8 368 aa16.18■□□□□ 0.18
SSBP3-203ENST00000371319 DAZLQ92904 295 aaKnown RBP16.18■□□□□ 0.18
SSBP3-203ENST00000371319 ART5Q96L15 291 aa16.18■□□□□ 0.18
SSBP3-203ENST00000371319 NXF5Q9H1B4 397 aaKnown RBP16.18■□□□□ 0.18
SSBP3-203ENST00000371319 ARMC7Q9H6L4 198 aa16.18■□□□□ 0.18
SSBP3-203ENST00000371319 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.18■□□□□ 0.18
SSBP3-203ENST00000371319 PAK1IP1Q9NWT1 392 aaPredicted RBP16.18■□□□□ 0.18
SSBP3-203ENST00000371319 DNAJB12Q9NXW2 375 aaKnown RBP16.18■□□□□ 0.18
SSBP3-203ENST00000371319 ZNF226Q9NYT6 803 aa16.18■□□□□ 0.18
SSBP3-203ENST00000371319 TESQ9UGI8 421 aaKnown RBP16.18■□□□□ 0.18
SSBP3-203ENST00000371319 MUC3AQ02505 3323 aa16.18■□□□□ 0.18
SSBP3-203ENST00000371319 BDP1A6H8Y1 2624 aa16.18■□□□□ 0.18
SSBP3-203ENST00000371319 SMIM31A0A1B0GVY4 71 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 CNOT3O75175 753 aaKnown RBP16.17■□□□□ 0.18
SSBP3-203ENST00000371319 HTR1AP08908 422 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 GABRB1P18505 474 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 CXCR4P61073 352 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 MC2RQ01718 297 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 ALDH6A1Q02252 535 aaKnown RBP16.17■□□□□ 0.18
SSBP3-203ENST00000371319 EBPQ15125 230 aaKnown RBP16.17■□□□□ 0.18
SSBP3-203ENST00000371319 TMEM236Q5W0B7 351 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 FAAH2Q6GMR7 532 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 ZNF730Q6ZMV8 503 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 ANKRD37Q7Z713 158 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 ZNF614Q8N883 585 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 AGBL5Q8NDL9 886 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 BPIFB6Q8NFQ5 453 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 OR1N1Q8NGS0 311 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 GNPDA2Q8TDQ7 276 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 ACOT11Q8WXI4 607 aaPredicted RBP16.17■□□□□ 0.18
SSBP3-203ENST00000371319 LCORQ96JN0 433 aaPredicted RBP16.17■□□□□ 0.18
SSBP3-203ENST00000371319 PRSS27Q9BQR3 290 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 RASSF1Q9NS23 344 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 RXFP3Q9NSD7 469 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 SLC7A7Q9UM01 511 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 SEC16AO15027 2179 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 TRAPPC13A5PLN9 417 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 XPNPEP2O43895 674 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 IL33O95760 270 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 CCL4P13236 92 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 CD59P13987 128 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 OMPP47874 163 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 COX10Q12887 443 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 SMN1Q16637 294 aaKnown RBP16.17■□□□□ 0.18
SSBP3-203ENST00000371319 MEX3DQ86XN8 651 aaKnown RBP16.17■□□□□ 0.18
SSBP3-203ENST00000371319 TOR1AIP2Q8NFQ8 470 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 RHOXF1Q8NHV9 184 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 TMEM255BQ8WV15 326 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 TMIGD2Q96BF3 282 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 EFHD2Q96C19 240 aaPredicted RBP16.17■□□□□ 0.18
SSBP3-203ENST00000371319 ZNF559Q9BR84 538 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 RBM38Q9H0Z9 239 aaKnown RBP16.17■□□□□ 0.18
SSBP3-203ENST00000371319 FLRT3Q9NZU0 649 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 NDUFA13Q9P0J0 144 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 BLOC1S6Q9UL45 172 aa16.17■□□□□ 0.18
SSBP3-203ENST00000371319 NCOR1O75376 2440 aa16.16■□□□□ 0.18
SSBP3-203ENST00000371319 C2orf92A0A1B0GVN3 265 aa16.16■□□□□ 0.18
SSBP3-203ENST00000371319 IDSB3KWA1 339 aa16.16■□□□□ 0.18
SSBP3-203ENST00000371319 CDX4O14627 284 aaPredicted RBP16.16■□□□□ 0.18
SSBP3-203ENST00000371319 POLR1CO15160 346 aaPredicted RBP16.16■□□□□ 0.18
SSBP3-203ENST00000371319 PIP5K1CO60331 668 aa16.16■□□□□ 0.18
SSBP3-203ENST00000371319 ABCB7O75027 752 aa16.16■□□□□ 0.18
SSBP3-203ENST00000371319 ADAM11O75078 769 aa16.16■□□□□ 0.18
SSBP3-203ENST00000371319 CPNE3O75131 537 aaKnown RBP16.16■□□□□ 0.18
SSBP3-203ENST00000371319 ALOX12BO75342 701 aa16.16■□□□□ 0.18
SSBP3-203ENST00000371319 SOX14O95416 240 aa16.16■□□□□ 0.18
SSBP3-203ENST00000371319 HEXBP07686 556 aa16.16■□□□□ 0.18
SSBP3-203ENST00000371319 ZNF28P17035 718 aa16.16■□□□□ 0.18
SSBP3-203ENST00000371319 EEF1B2P24534 225 aaKnown RBP16.16■□□□□ 0.18
SSBP3-203ENST00000371319 POU1F1P28069 291 aa16.16■□□□□ 0.18
SSBP3-203ENST00000371319 KRT20P35900 424 aa16.16■□□□□ 0.18
SSBP3-203ENST00000371319 ACAA2P42765 397 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms