RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 DPPA4Q7L190 304 aa20.87■□□□□ 0.93
TM9SF3-201ENST00000371142 ZNF765Q7L2R6 523 aa20.87■□□□□ 0.93
TM9SF3-201ENST00000371142 TAS1R1Q7RTX1 841 aa20.87■□□□□ 0.93
TM9SF3-201ENST00000371142 TCEAL8Q8IYN2 117 aa20.87■□□□□ 0.93
TM9SF3-201ENST00000371142 GPN2Q9H9Y4 310 aaPredicted RBP20.87■□□□□ 0.93
TM9SF3-201ENST00000371142 ATG12O94817 140 aa20.87■□□□□ 0.93
TM9SF3-201ENST00000371142 ERVK-25P63136 954 aa20.87■□□□□ 0.93
TM9SF3-201ENST00000371142 CNIH2Q6PI25 160 aa20.87■□□□□ 0.93
TM9SF3-201ENST00000371142 ZNF695Q8IW36 515 aa20.87■□□□□ 0.93
TM9SF3-201ENST00000371142 OR9K2Q8NGE7 335 aa20.87■□□□□ 0.93
TM9SF3-201ENST00000371142 GOLGA4Q13439 2230 aaKnown RBP20.87■□□□□ 0.93
TM9SF3-201ENST00000371142 EXOSC7Q15024 291 aaKnown RBP20.87■□□□□ 0.93
TM9SF3-201ENST00000371142 RHBDD1Q8TEB9 315 aa20.87■□□□□ 0.93
TM9SF3-201ENST00000371142 ACPTQ9BZG2 426 aa20.87■□□□□ 0.93
TM9SF3-201ENST00000371142 MYH8P13535 1937 aa20.87■□□□□ 0.93
TM9SF3-201ENST00000371142 FANCGO15287 622 aa20.87■□□□□ 0.93
TM9SF3-201ENST00000371142 SSTR4P31391 388 aa20.87■□□□□ 0.93
TM9SF3-201ENST00000371142 SLC6A8P48029 635 aa20.87■□□□□ 0.93
TM9SF3-201ENST00000371142 PROX2Q3B8N5 592 aa20.87■□□□□ 0.93
TM9SF3-201ENST00000371142 C3P1Q6ZMU1 363 aa20.87■□□□□ 0.93
TM9SF3-201ENST00000371142 CBARPQ8N350 705 aaPredicted RBP20.87■□□□□ 0.93
TM9SF3-201ENST00000371142 FOXN4Q96NZ1 517 aa20.87■□□□□ 0.93
TM9SF3-201ENST00000371142 MAP3K3Q99759 626 aa20.87■□□□□ 0.93
TM9SF3-201ENST00000371142 MMP28Q9H239 520 aa20.87■□□□□ 0.93
TM9SF3-201ENST00000371142 PLEKHJ1Q9NW61 149 aa20.87■□□□□ 0.93
TM9SF3-201ENST00000371142 VSX1Q9NZR4 365 aaPredicted RBP20.87■□□□□ 0.93
TM9SF3-201ENST00000371142 VAPAQ9P0L0 249 aa20.87■□□□□ 0.93
TM9SF3-201ENST00000371142 PRAMEF26H0Y7S4 382 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 FGF4P08620 206 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 POLR2HP52434 150 aaKnown RBP20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 CDK3Q00526 305 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 CPZQ66K79 652 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 CCDC71LQ8N9Z2 235 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 CPT1CQ8TCG5 803 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 DCUN1D4Q92564 292 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 ZNF300Q96RE9 604 aaPredicted RBP20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 FAM230AA0A1W2PPH8 454 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 CAV2P51636 162 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 KCTD20Q7Z5Y7 419 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 COMMD7Q86VX2 200 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 SERPINA12Q8IW75 414 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 GCDHQ92947 438 aaPredicted RBP20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 KLF16Q9BXK1 252 aaPredicted RBP20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 TMEM181Q9P2C4 612 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 MROH6A6NGR9 719 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 SLC9B1P1A6NJY1 282 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 GABRR3A8MPY1 467 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 H3BQ06 376 aaPredicted RBP20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 HMGN2P05204 90 aaKnown RBP20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 RAB3AP20336 220 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 IRF4Q15306 451 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 AKR1C8PQ5T2L2 129 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 CNOT9Q92600 299 aaKnown RBP20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 ACAD8Q9UKU7 415 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 UBFD1O14562 309 aaKnown RBP20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 GJB3O75712 270 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 ETV5P41161 510 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 EMP2P54851 167 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 ADAMTS19Q8TE59 1207 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 PTRH2Q9Y3E5 179 aaKnown RBP20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 GPR39O43194 453 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 GPX3P22352 226 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 PTPN6P29350 595 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 P2RY14Q15391 338 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 ELP2Q6IA86 826 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 FAM198BQ6UWH4 519 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 PARS2Q7L3T8 475 aaKnown RBP20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 ASF1BQ9NVP2 202 aa20.86■□□□□ 0.93
TM9SF3-201ENST00000371142 TAP2Q03519 686 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 STK11Q15831 433 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 GTPBP8Q8N3Z3 284 aaPredicted RBP20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 UHRF1Q96T88 793 aaPredicted RBP20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 SACM1LQ9NTJ5 587 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 UGT2B7P16662 529 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 DRD1P21728 446 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 B3GNT7Q8NFL0 401 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 SORT1Q99523 831 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 PDLIM7Q9NR12 457 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 TEX10Q9NXF1 929 aaPredicted RBP20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 ENTPD2Q9Y5L3 495 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 SULT2B1O00204 365 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 SC5DO75845 299 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 GYPBP06028 91 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 DCNP07585 359 aaKnown RBP20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 XCR1P46094 333 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 EPHA4P54764 986 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 GPR50Q13585 617 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 RNF175Q8N4F7 328 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 SLC2A12Q8TD20 617 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 TRAV27A0A087WT01 109 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 A6NIZ1 184 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 SPDEFO95238 335 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 BMP4P12644 408 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 GABRR1P24046 479 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 RAP1BP61224 184 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 RAP1AP62834 184 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 ZNF33BQ06732 778 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 KEAP1Q14145 624 aa20.85■□□□□ 0.93
TM9SF3-201ENST00000371142 MORN1Q5T089 497 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms