RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 HORMAD2Q8N7B1 307 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 YIPF7Q8N8F6 280 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 CHST14Q8NCH0 376 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 ZNF485Q8NCK3 441 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 LSM14AQ8ND56 463 aaKnown RBP10.77□□□□□ -0.69
USF1-201ENST00000368019 OR9A1PQ8NGU1 263 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 OR52N1Q8NH53 320 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 CXorf40AQ8TE69 158 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 SLC38A5Q8WUX1 472 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 SLC39A7Q92504 469 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 KLK6Q92876 244 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 GLYATL1Q969I3 302 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 CIDECQ96AQ7 238 aaPredicted RBP10.77□□□□□ -0.69
USF1-201ENST00000368019 KCTD12Q96CX2 325 aaKnown RBP10.77□□□□□ -0.69
USF1-201ENST00000368019 TMEM19Q96HH6 336 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 LINC00615Q96LM1 132 aaPredicted RBP10.77□□□□□ -0.69
USF1-201ENST00000368019 PRRC1Q96M27 445 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 FYTTD1Q96QD9 318 aaKnown RBP10.77□□□□□ -0.69
USF1-201ENST00000368019 ZCCHC2Q9C0B9 1178 aaKnown RBP10.77□□□□□ -0.69
USF1-201ENST00000368019 SLC6A16Q9GZN6 736 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.77□□□□□ -0.69
USF1-201ENST00000368019 RHBGQ9H310 441 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 CXorf36Q9H7Y0 433 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 PELI2Q9HAT8 420 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 PLSCR3Q9NRY6 295 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 GPR27Q9NS67 375 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 SEMA3GQ9NS98 782 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 GIMAP4Q9NUV9 329 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 TAAR2Q9P1P5 351 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 ACSL6Q9UKU0 697 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 A4GNTQ9UNA3 340 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 ZFR2Q9UPR6 939 aaKnown RBP10.77□□□□□ -0.69
USF1-201ENST00000368019 SLC9A8Q9Y2E8 581 aa10.77□□□□□ -0.69
USF1-201ENST00000368019 SPIN1Q9Y657 262 aaPredicted RBP10.77□□□□□ -0.69
USF1-201ENST00000368019 LY6G6EA0A0G2JKS1 128 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 C17orf113A0A1B0GUU1 675 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 OR6C70A6NIJ9 312 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 ERVH48-1M5A8F1 160 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 SYT5O00445 386 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 TFECO14948 347 aaPredicted RBP10.76□□□□□ -0.69
USF1-201ENST00000368019 PDPK1O15530 556 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 LYRM1O43325 122 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 TSPAN6O43657 245 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 NDUFB5O43674 189 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 AKAP8O43823 692 aaKnown RBP10.76□□□□□ -0.69
USF1-201ENST00000368019 BNIP3LO60238 219 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 CRYZL1O95825 349 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 PRNPP04156 253 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 BCHEP06276 602 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 IL3P08700 152 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 SLC2A2P11168 524 aaPredicted RBP10.76□□□□□ -0.69
USF1-201ENST00000368019 CD53P19397 219 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 HNRNPA2B1P22626 353 aaKnown RBP10.76□□□□□ -0.69
USF1-201ENST00000368019 ETV5P41161 510 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 ETV1P50549 477 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 PCBP4P57723 403 aaKnown RBP10.76□□□□□ -0.69
USF1-201ENST00000368019 TLE3Q04726 772 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 GINS1Q14691 196 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 CRTC2Q53ET0 693 aaPredicted RBP10.76□□□□□ -0.69
USF1-201ENST00000368019 Q5BKY6 102 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 FAM209AQ5JX71 171 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 C22orf42Q6IC83 251 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 DPY19L3Q6ZPD9 716 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 ERN2Q76MJ5 926 aaKnown RBP10.76□□□□□ -0.69
USF1-201ENST00000368019 ZNF765Q7L2R6 523 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 HSD11B1LQ7Z5J1 315 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 CCDC28AQ8IWP9 274 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 SLC22A18ASQ8N1D0 253 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 TBC1D19Q8N5T2 526 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 RASGEF1AQ8N9B8 481 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 POGLUT1Q8NBL1 392 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 OR13H1Q8NG92 308 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 WDR48Q8TAF3 677 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 GNPDA2Q8TDQ7 276 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 DNAJA4Q8WW22 397 aaPredicted RBP10.76□□□□□ -0.69
USF1-201ENST00000368019 SMPDL3AQ92484 453 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 RFKQ969G6 155 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 ZNF514Q96K75 400 aaPredicted RBP10.76□□□□□ -0.69
USF1-201ENST00000368019 BMFQ96LC9 184 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 SLC38A2Q96QD8 506 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 HDAC8Q9BY41 377 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 PIGUQ9H490 435 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 DPEP2Q9H4A9 486 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 ZDHHC6Q9H6R6 413 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 TRIM39Q9HCM9 518 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 ZNF275Q9NSD4 429 aaPredicted RBP10.76□□□□□ -0.69
USF1-201ENST00000368019 P2RX2Q9UBL9 471 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 FAM8A1Q9UBU6 413 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 EXOGQ9Y2C4 368 aaKnown RBP10.76□□□□□ -0.69
USF1-201ENST00000368019 HS3ST3A1Q9Y663 406 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 ALG5Q9Y673 324 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 AUP1Q9Y679 476 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 U3KQA8 63 aa10.76□□□□□ -0.69
USF1-201ENST00000368019 NUP214P35658 2090 aaPredicted RBP10.76□□□□□ -0.69
USF1-201ENST00000368019 FAM240BA0A1B0GVZ2 78 aa10.75□□□□□ -0.69
USF1-201ENST00000368019 C7orf66A4D0T2 115 aa10.75□□□□□ -0.69
USF1-201ENST00000368019 A8MX80 341 aa10.75□□□□□ -0.69
USF1-201ENST00000368019 KPNA3O00505 521 aaPredicted RBP10.75□□□□□ -0.69
USF1-201ENST00000368019 LZTS3O60299 673 aaPredicted RBP10.75□□□□□ -0.69
USF1-201ENST00000368019 OR2B3O76000 313 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms