RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 HLA-DMAP28067 261 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 SLC6A9P48067 706 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 ARL11Q969Q4 196 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 SERINC2Q96SA4 455 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 SLC28A3Q9HAS3 691 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 NDUFB11Q9NX14 153 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 POLR1CO15160 346 aaPredicted RBP11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 TOXO94900 526 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 APOC3P02656 99 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 S100A2P29034 98 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 MTNR1BP49286 362 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 RIDAP52758 137 aaKnown RBP11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 GBX1Q14549 363 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 RPL22L1Q6P5R6 122 aaKnown RBP11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 RADILQ96JH8 1075 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 HIST1H2AAQ96QV6 131 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 KCNIP3Q9Y2W7 256 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 NPFFR2Q9Y5X5 522 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 HPGDSO60760 199 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 TMEM127O75204 238 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 TP53P04637 393 aaPredicted RBP11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 VAMP2P63027 116 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 KLHDC8BQ8IXV7 354 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 TMEM130Q8N3G9 435 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 ZFP41Q8N8Y5 198 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 GPR148Q8TDV2 347 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 TEX37Q96LM6 180 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 PHB2Q99623 299 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 ZNF350Q9GZX5 532 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 FARSAQ9Y285 508 aaKnown RBP11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 TNFRSF1BP20333 461 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 FUT4P22083 530 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 GLP1RP43220 463 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 RNASE10Q5GAN6 216 aaKnown RBP11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 RNF165Q6ZSG1 346 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 PLPP6Q8IY26 295 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 OR6N2Q8NGY6 317 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 AUTS2Q8WXX7 1259 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 RBM38Q9H0Z9 239 aaKnown RBP11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 SCML1Q9UN30 329 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 MPDZO75970 2070 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 TIGD3Q6B0B8 471 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 MEPCEQ7L2J0 689 aaKnown RBP11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 DPF3Q92784 378 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 LYSMD1Q96S90 227 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 P2RY12Q9H244 342 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 KCNN3Q9UGI6 736 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 RGRP47804 291 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 CRYZQ08257 329 aaKnown RBP11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 HNRNPA1L2Q32P51 320 aaKnown RBP11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 EOGTQ5NDL2 527 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 PGBD5Q8N414 524 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 OR5AK2Q8NH90 309 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 TMEM41AQ96HV5 264 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 BEX1Q9HBH7 125 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 C19orf25Q9UFG5 118 aaPredicted RBP11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 SLC6A5Q9Y345 797 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 UGT2B7P16662 529 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 MAMDC2Q7Z304 686 aaPredicted RBP11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 ZNF582Q96NG8 517 aaPredicted RBP11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 PRAMEF2O60811 474 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 MMP2P08253 660 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 NKAPLQ5M9Q1 402 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 OTUD1Q5VV17 481 aaPredicted RBP11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 GPR139Q6DWJ6 353 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 DUS1LQ6P1R4 473 aaKnown RBP11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 ZNF704Q6ZNC4 412 aaPredicted RBP11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 SLCO4C1Q6ZQN7 724 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 GPAT4Q86UL3 456 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 OR5T3Q8NGG3 340 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 TRIB2Q92519 343 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 OSGIN1Q9UJX0 560 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 PCDHGA6Q9Y5G7 932 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 PARP14Q460N5 1801 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 GJA1P17302 382 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 C17orf99Q6UX52 265 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 TMEM239Q8WW34 195 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 CENPMQ9NSP4 180 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 ETV7Q9Y603 341 aa11.11□□□□□ -0.63
CDC42BPA-202ENST00000366764 SYPP08247 313 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 ELAVL4P26378 380 aaKnown RBP11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 PRKAR1BP31321 381 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 OPRD1P41143 372 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 S100A10P60903 97 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 NKX3-2P78367 333 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 TDGQ13569 410 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 ULK3Q6PHR2 472 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 DYNC2LI1Q8TCX1 351 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 SLC7A6Q92536 515 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 ELMOD3Q96FG2 381 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 SAMD11Q96NU1 681 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 ITGA5P08648 1049 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 ZXDBP98169 803 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 PXKQ7Z7A4 578 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 SLC35F2Q8IXU6 374 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 SMPDL3BQ92485 455 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 PMM1Q92871 262 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 EPHA6Q9UF33 1036 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 RASD1Q9Y272 281 aa11.1□□□□□ -0.63
CDC42BPA-202ENST00000366764 OR1A2Q9Y585 309 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms