RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 SLC51BQ86UW2 128 aa12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 OR52J3Q8NH60 311 aa12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 TXNDC15Q96J42 360 aa12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 OR7D2Q96RA2 312 aa12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 COPS4Q9BT78 406 aa12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 ZNF556Q9HAH1 456 aa12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 PTGFRNQ9P2B2 879 aa12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 RNF6Q9Y252 685 aa12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 SCN3AQ9NY46 2000 aa12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 FAM172BPA6NC97 362 aa12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 GALR3O60755 368 aaPredicted RBP12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 UPK1BO75841 260 aa12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 SLITRK5O94991 958 aa12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 IFI6P09912 130 aa12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 MLLT3P42568 568 aaPredicted RBP12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 ZNF404Q494X3 552 aa12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 TMEM71Q6P5X7 295 aa12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 PRSS48Q7RTY5 328 aa12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 GIMAP5Q96F15 307 aa12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 ITPAQ9BY32 194 aa12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 ACAD8Q9UKU7 415 aa12.91□□□□□ -0.34
CSNK1E-201ENST00000359867 PCNX2A6NKB5 2137 aa12.9□□□□□ -0.34
CSNK1E-201ENST00000359867 H3BUI4 141 aa12.9□□□□□ -0.34
CSNK1E-201ENST00000359867 M0R082 166 aa12.9□□□□□ -0.34
CSNK1E-201ENST00000359867 ERVH48-1M5A8F1 160 aa12.9□□□□□ -0.34
CSNK1E-201ENST00000359867 CHRM4P08173 479 aa12.9□□□□□ -0.34
CSNK1E-201ENST00000359867 MSL3P1P0C860 447 aa12.9□□□□□ -0.34
CSNK1E-201ENST00000359867 CTRB1P17538 263 aa12.9□□□□□ -0.34
CSNK1E-201ENST00000359867 ACP1P24666 158 aa12.9□□□□□ -0.34
CSNK1E-201ENST00000359867 CLDN6P56747 220 aa12.9□□□□□ -0.34
CSNK1E-201ENST00000359867 VSX2P58304 361 aaPredicted RBP12.9□□□□□ -0.34
CSNK1E-201ENST00000359867 NHLH1Q02575 133 aa12.9□□□□□ -0.34
CSNK1E-201ENST00000359867 FUT5Q11128 374 aa12.9□□□□□ -0.34
CSNK1E-201ENST00000359867 CTRB2Q6GPI1 263 aa12.9□□□□□ -0.34
CSNK1E-201ENST00000359867 SPATC1Q76KD6 591 aa12.9□□□□□ -0.34
CSNK1E-201ENST00000359867 P3H2Q8IVL5 708 aa12.9□□□□□ -0.34
CSNK1E-201ENST00000359867 ASCC1Q8N9N2 400 aaKnown RBP12.9□□□□□ -0.34
CSNK1E-201ENST00000359867 RNF31Q96EP0 1072 aa12.9□□□□□ -0.34
CSNK1E-201ENST00000359867 C16orf58Q96GQ5 468 aa12.9□□□□□ -0.34
CSNK1E-201ENST00000359867 TRNT1Q96Q11 434 aaKnown RBP12.9□□□□□ -0.34
CSNK1E-201ENST00000359867 GFM1Q96RP9 751 aaKnown RBP12.9□□□□□ -0.34
CSNK1E-201ENST00000359867 CD180Q99467 661 aa12.9□□□□□ -0.34
CSNK1E-201ENST00000359867 BCL7BQ9BQE9 202 aa12.9□□□□□ -0.34
CSNK1E-201ENST00000359867 YIPF4Q9BSR8 244 aa12.9□□□□□ -0.34
CSNK1E-201ENST00000359867 RSPO3Q9BXY4 272 aaPredicted RBP12.9□□□□□ -0.34
CSNK1E-201ENST00000359867 TAS2R16Q9NYV7 291 aa12.9□□□□□ -0.34
CSNK1E-201ENST00000359867 KCNN3Q9UGI6 736 aa12.9□□□□□ -0.34
CSNK1E-201ENST00000359867 MRPS2Q9Y399 296 aaKnown RBP12.9□□□□□ -0.34
CSNK1E-201ENST00000359867 CCDC88CQ9P219 2028 aa12.9□□□□□ -0.34
CSNK1E-201ENST00000359867 CPMP14384 443 aa12.9□□□□□ -0.35
CSNK1E-201ENST00000359867 CSNK2BP67870 215 aa12.9□□□□□ -0.35
CSNK1E-201ENST00000359867 SIM1P81133 766 aaPredicted RBP12.9□□□□□ -0.35
CSNK1E-201ENST00000359867 TCTN3Q6NUS6 607 aa12.9□□□□□ -0.35
CSNK1E-201ENST00000359867 OR2L13Q8N349 312 aa12.9□□□□□ -0.35
CSNK1E-201ENST00000359867 KAT2AQ92830 837 aa12.9□□□□□ -0.35
CSNK1E-201ENST00000359867 SLC38A4Q969I6 547 aa12.9□□□□□ -0.35
CSNK1E-201ENST00000359867 MS4A4EQ96PG1 132 aa12.9□□□□□ -0.35
CSNK1E-201ENST00000359867 PINK1Q9BXM7 581 aa12.9□□□□□ -0.35
CSNK1E-201ENST00000359867 OR51E2Q9H255 320 aa12.9□□□□□ -0.35
CSNK1E-201ENST00000359867 SLC9A8Q9Y2E8 581 aa12.9□□□□□ -0.35
CSNK1E-201ENST00000359867 PCDHGA6Q9Y5G7 932 aa12.9□□□□□ -0.35
CSNK1E-201ENST00000359867 IGHV5-10-1A0A0J9YXX1 117 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 PROB1E7EW31 1015 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 MEN1O00255 615 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 CYR61O00622 381 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 FFAR1O14842 300 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 PCDH17O14917 1159 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 SNPHO15079 494 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 SRPX2O60687 465 aaPredicted RBP12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 MRPS14O60783 128 aaKnown RBP12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 HSMCR30P0CW71 290 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 CBLP22681 906 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 PTGER1P34995 402 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 IDH2P48735 452 aaKnown RBP12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 ARL4DP49703 201 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 GANABQ14697 944 aaKnown RBP12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 LTB4RQ15722 352 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 STK11Q15831 433 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 TIGD6Q17RP2 521 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 GPAT3Q53EU6 434 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 CDC73Q6P1J9 531 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 TAGAPQ8N103 731 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 ANGPTL6Q8NI99 470 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 TCTN2Q96GX1 697 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 NMNAT1Q9HAN9 279 aaPredicted RBP12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 PDE7BQ9NP56 450 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 CCNB1IP1Q9NPC3 277 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 GPR83Q9NYM4 423 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 TMCC3Q9ULS5 477 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 METTL15A6NJ78 407 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 D6RAR5 112 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 SSX4O60224 188 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 DNAJB6O75190 326 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 LGI1O95970 557 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 S100A5P33763 92 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 DESI1Q6ICB0 168 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 MCATQ8IVS2 390 aaKnown RBP12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 CCDC103Q8IW40 242 aa12.89□□□□□ -0.35
CSNK1E-201ENST00000359867 CA13Q8N1Q1 262 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms