RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 EIF3IQ13347 325 aaKnown RBP12.48□□□□□ -0.41
CCDC197-201ENST00000359253 PIN1Q13526 163 aaPredicted RBP12.48□□□□□ -0.41
CCDC197-201ENST00000359253 GANABQ14697 944 aaKnown RBP12.48□□□□□ -0.41
CCDC197-201ENST00000359253 ISXQ2M1V0 245 aa12.48□□□□□ -0.41
CCDC197-201ENST00000359253 CCDC157Q569K6 752 aa12.48□□□□□ -0.41
CCDC197-201ENST00000359253 FGD3Q5JSP0 725 aa12.48□□□□□ -0.41
CCDC197-201ENST00000359253 CCNJQ5T5M9 372 aa12.48□□□□□ -0.41
CCDC197-201ENST00000359253 HES3Q5TGS1 186 aa12.48□□□□□ -0.41
CCDC197-201ENST00000359253 ZNF770Q6IQ21 691 aaPredicted RBP12.48□□□□□ -0.41
CCDC197-201ENST00000359253 MRPL14Q6P1L8 145 aaKnown RBP12.48□□□□□ -0.41
CCDC197-201ENST00000359253 FIGNL1Q6PIW4 674 aa12.48□□□□□ -0.41
CCDC197-201ENST00000359253 NPSR1Q6W5P4 371 aa12.48□□□□□ -0.41
CCDC197-201ENST00000359253 ZNF550Q7Z398 422 aa12.48□□□□□ -0.41
CCDC197-201ENST00000359253 RBM45Q8IUH3 476 aaKnown RBP12.48□□□□□ -0.41
CCDC197-201ENST00000359253 LACC1Q8IV20 430 aa12.48□□□□□ -0.41
CCDC197-201ENST00000359253 RNF113BQ8IZP6 322 aaKnown RBP12.48□□□□□ -0.41
CCDC197-201ENST00000359253 BCORP1Q8N888 145 aa12.48□□□□□ -0.41
CCDC197-201ENST00000359253 SLC38A9Q8NBW4 561 aa12.48□□□□□ -0.41
CCDC197-201ENST00000359253 OR8K3Q8NH51 312 aa12.48□□□□□ -0.41
CCDC197-201ENST00000359253 HDAC2Q92769 488 aaKnown RBP12.48□□□□□ -0.41
CCDC197-201ENST00000359253 DIO2Q92813 273 aa12.48□□□□□ -0.41
CCDC197-201ENST00000359253 HRASLS5Q96KN8 279 aa12.48□□□□□ -0.41
CCDC197-201ENST00000359253 MCHR1Q99705 422 aa12.48□□□□□ -0.41
CCDC197-201ENST00000359253 BARD1Q99728 777 aaKnown RBP12.48□□□□□ -0.41
CCDC197-201ENST00000359253 ZNF559Q9BR84 538 aa12.48□□□□□ -0.41
CCDC197-201ENST00000359253 SCNM1Q9BWG6 230 aa12.48□□□□□ -0.41
CCDC197-201ENST00000359253 ITPAQ9BY32 194 aa12.48□□□□□ -0.41
CCDC197-201ENST00000359253 OR8D2Q9GZM6 311 aa12.48□□□□□ -0.41
CCDC197-201ENST00000359253 NRSN2Q9GZP1 204 aa12.48□□□□□ -0.41
CCDC197-201ENST00000359253 QRSL1Q9H0R6 528 aaKnown RBP12.48□□□□□ -0.41
CCDC197-201ENST00000359253 NDUFA13Q9P0J0 144 aa12.48□□□□□ -0.41
CCDC197-201ENST00000359253 CTSFQ9UBX1 484 aa12.48□□□□□ -0.41
CCDC197-201ENST00000359253 GPN3Q9UHW5 284 aaPredicted RBP12.48□□□□□ -0.41
CCDC197-201ENST00000359253 SLC35A3Q9Y2D2 325 aa12.48□□□□□ -0.41
CCDC197-201ENST00000359253 CHST2Q9Y4C5 530 aa12.48□□□□□ -0.41
CCDC197-201ENST00000359253 GMPPBQ9Y5P6 360 aa12.48□□□□□ -0.41
CCDC197-201ENST00000359253 A0A087WXM4 84 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 C2orf92A0A1B0GVN3 265 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 OR2W5A6NFC9 320 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 IDSB3KWA1 339 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 C9J4A7 227 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 OR10H3O60404 316 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 SEMA7AO75326 666 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 NME6O75414 186 aaPredicted RBP12.47□□□□□ -0.41
CCDC197-201ENST00000359253 TIAF1O95411 115 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 GNAO1P09471 354 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 ALDH6A1Q02252 535 aaKnown RBP12.47□□□□□ -0.41
CCDC197-201ENST00000359253 TARDBPQ13148 414 aaKnown RBP eCLIP12.47□□□□□ -0.41
CCDC197-201ENST00000359253 FGFBP1Q14512 234 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 NPTX1Q15818 432 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 ENTPD8Q5MY95 495 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 MRPL2Q5T653 305 aaKnown RBP12.47□□□□□ -0.41
CCDC197-201ENST00000359253 DCAF12Q5T6F0 453 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 C1orf94Q6P1W5 598 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 ZNF613Q6PF04 617 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 TMEM205Q6UW68 189 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 PLEKHM3Q6ZWE6 761 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 RRM2BQ7LG56 351 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 OLIG3Q7RTU3 272 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 ANKRD37Q7Z713 158 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 DEPDC4Q8N2C3 294 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 CLIP4Q8N3C7 705 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 AQP11Q8NBQ7 271 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 DOK4Q8TEW6 326 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 FBLIM1Q8WUP2 373 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 ADIPOR1Q96A54 375 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 LIN37Q96GY3 246 aaPredicted RBP12.47□□□□□ -0.41
CCDC197-201ENST00000359253 CCNL2Q96S94 520 aaPredicted RBP12.47□□□□□ -0.41
CCDC197-201ENST00000359253 CTRCQ99895 268 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 UCK2Q9BZX2 261 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 TRIM2Q9C040 744 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 FAM117AQ9C073 453 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 SEMA4CQ9C0C4 833 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 RIBC2Q9H4K1 309 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 UBQLN4Q9NRR5 601 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 SLC39A1Q9NY26 324 aa12.47□□□□□ -0.41
CCDC197-201ENST00000359253 TRBV4-1A0A0J9YWV2 114 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 MED19A0JLT2 244 aaPredicted RBP12.46□□□□□ -0.41
CCDC197-201ENST00000359253 TRAPPC13A5PLN9 417 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 A6NHS1 94 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 SAGE2PA6NJ88 616 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 MPZL2O60487 215 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 CLPTM1O96005 669 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 GASTP01350 101 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 IGHEP01854 428 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 CCDC159P0C7I6 412 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 OSMP13725 252 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 SLC5A2P31639 672 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 KRT20P35900 424 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 GTF2A1P52655 376 aaPredicted RBP12.46□□□□□ -0.41
CCDC197-201ENST00000359253 ISL1P61371 349 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 RPP38P78345 283 aaKnown RBP12.46□□□□□ -0.41
CCDC197-201ENST00000359253 IL1RL1Q01638 556 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 CAMK2BQ13554 666 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 LAPTM4AQ15012 233 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 EBPQ15125 230 aaKnown RBP12.46□□□□□ -0.41
CCDC197-201ENST00000359253 MAPK14Q16539 360 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 PODNL1Q6PEZ8 512 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 B3GNT8Q7Z7M8 397 aa12.46□□□□□ -0.41
CCDC197-201ENST00000359253 GALNT5Q7Z7M9 940 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms