RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 OR6V1Q8N148 313 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 LILRB2Q8N423 598 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 NUP43Q8NFH3 380 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 OR4K14Q8NGD5 310 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 OR52E2Q8NGJ4 325 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 RNF128Q8TEB7 428 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 GLYATL2Q8WU03 294 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 METTL2AQ96IZ6 378 aaKnown RBP8.3□□□□□ -1.08
COL6A6-201ENST00000358511 PCDHAC2Q9Y5I4 1007 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 OR2A25A4D2G3 310 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 ADM5C9JUS6 153 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 EGFP01133 1207 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 PFKLP17858 780 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 PSMB1P20618 241 aaKnown RBP8.3□□□□□ -1.08
COL6A6-201ENST00000358511 TBPL1P62380 186 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 PHOSPHO1Q8TCT1 267 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 ST8SIA2Q92186 375 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 BTF3L4Q96K17 158 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 ZNF587Q96SQ5 575 aaPredicted RBP8.3□□□□□ -1.08
COL6A6-201ENST00000358511 METTL15A6NJ78 407 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 NUDT19A8MXV4 375 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 TO15178 435 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 NFATC1O95644 943 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 TBX18O95935 607 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 SBK2P0C263 348 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 C8orf89P0DMQ9 161 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 PTPRCAPQ14761 206 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 DHRS4L2Q6PKH6 230 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 FAM83HQ6ZRV2 1179 aaPredicted RBP8.3□□□□□ -1.08
COL6A6-201ENST00000358511 CNTN4Q8IWV2 1026 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 TMEM19Q96HH6 336 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 LSM5Q9Y4Y9 91 aaKnown RBP8.3□□□□□ -1.08
COL6A6-201ENST00000358511 UPK3BL1B0FP48 263 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 UPK3BL2E5RIL1 263 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 SIX6O95475 246 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 H2BFMP0C1H6 154 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 PTRH1Q86Y79 214 aaKnown RBP8.29□□□□□ -1.08
COL6A6-201ENST00000358511 CPA6Q8N4T0 437 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 OR51D1Q8NGF3 324 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 FAM83CQ9BQN1 747 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 SIX4Q9UIU6 781 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 SCGB2A1O75556 95 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 TNFRSF1BP20333 461 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 SHMT2P34897 504 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 CLCNKAP51800 687 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 ZNF252P-AS1Q0IIN9 211 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 SPRYD4Q8WW59 207 aaPredicted RBP8.29□□□□□ -1.08
COL6A6-201ENST00000358511 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.29□□□□□ -1.08
COL6A6-201ENST00000358511 PLCXD1Q9NUJ7 323 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 TDRD15B5MCY1 1934 aaKnown RBP8.29□□□□□ -1.08
COL6A6-201ENST00000358511 EIF3FO00303 357 aaPredicted RBP8.29□□□□□ -1.08
COL6A6-201ENST00000358511 PPT1P50897 306 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 UBE2KP61086 200 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 PLA2G7Q13093 441 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 SMN1Q16637 294 aaKnown RBP8.29□□□□□ -1.08
COL6A6-201ENST00000358511 RNF151Q2KHN1 245 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 HIST2H3PS2Q5TEC6 136 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 PRSS55Q6UWB4 352 aaPredicted RBP8.29□□□□□ -1.08
COL6A6-201ENST00000358511 SUSD1Q6UWL2 747 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 CPOQ8IVL8 374 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 GLB1L2Q8IW92 636 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 NRMQ8IXM6 262 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 GGHQ92820 318 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 SHISA4Q96DD7 197 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 BTBD2Q9BX70 525 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 MARCH4Q9P2E8 410 aaPredicted RBP8.29□□□□□ -1.08
COL6A6-201ENST00000358511 KCNS2Q9ULS6 477 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 PADI3Q9ULW8 664 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 B3GALT1Q9Y5Z6 326 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 A8MXE2 369 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 CYTIPO60759 359 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 CDKN1CP49918 316 aaPredicted RBP8.29□□□□□ -1.08
COL6A6-201ENST00000358511 TMEM107Q6UX40 140 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 USP51Q70EK9 711 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 PDZD3Q86UT5 571 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 LRRC56Q8IYG6 542 aaPredicted RBP8.29□□□□□ -1.08
COL6A6-201ENST00000358511 SMPDL3BQ92485 455 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 TGM7Q96PF1 710 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 TUBB1Q9H4B7 451 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 IFT22Q9H7X7 185 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 PSORS1C1Q9UIG5 152 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 FBXL4Q9UKA2 621 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 A8MUA0 341 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 SEC14L5O43304 696 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 MT-CO2P00403 227 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 HNF1BP35680 557 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 ZNF41P51814 821 aaPredicted RBP8.29□□□□□ -1.08
COL6A6-201ENST00000358511 CCINQ13939 588 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 RPS26P11Q5JNZ5 115 aaPredicted RBP8.29□□□□□ -1.08
COL6A6-201ENST00000358511 SIGIRRQ6IA17 410 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 NADSYN1Q6IA69 706 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 SLC35F2Q8IXU6 374 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 LRRC25Q8N386 305 aaPredicted RBP8.29□□□□□ -1.08
COL6A6-201ENST00000358511 OR56B2PQ8NGI1 322 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 OR14C36Q8NHC7 312 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 TMEM163Q8TC26 289 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 ECHDC3Q96DC8 303 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 CNIH4Q9P003 139 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 KIF25Q9UIL4 384 aa8.29□□□□□ -1.08
COL6A6-201ENST00000358511 BTNL2Q9UIR0 455 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms