RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 SLC1A7O00341 560 aa21.1■□□□□ 0.97
SCAMP3-202ENST00000355379 LCN1P31025 176 aa21.1■□□□□ 0.97
SCAMP3-202ENST00000355379 RFX3P48380 749 aa21.1■□□□□ 0.97
SCAMP3-202ENST00000355379 ALDH6A1Q02252 535 aaKnown RBP21.1■□□□□ 0.97
SCAMP3-202ENST00000355379 TEKQ02763 1124 aa21.1■□□□□ 0.97
SCAMP3-202ENST00000355379 TARDBPQ13148 414 aaKnown RBP eCLIP21.1■□□□□ 0.973e-7■■□□□ 12.4
SCAMP3-202ENST00000355379 ZER1Q7Z7L7 766 aa21.1■□□□□ 0.97
SCAMP3-202ENST00000355379 GNPDA2Q8TDQ7 276 aa21.1■□□□□ 0.97
SCAMP3-202ENST00000355379 ACOT11Q8WXI4 607 aaPredicted RBP21.1■□□□□ 0.97
SCAMP3-202ENST00000355379 ZNF559Q9BR84 538 aa21.1■□□□□ 0.97
SCAMP3-202ENST00000355379 MRTO4Q9UKD2 239 aaKnown RBP21.1■□□□□ 0.97
SCAMP3-202ENST00000355379 TRAPPC13A5PLN9 417 aa21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 CPNE3O75131 537 aaKnown RBP21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 IL33O95760 270 aa21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 ANGPTL1O95841 491 aa21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 HEXBP07686 556 aa21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 GSTM3P21266 225 aa21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 MMP11P24347 488 aa21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 CCKBRP32239 447 aa21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 HOXC5Q00444 222 aa21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 PTGES3Q15185 160 aaKnown RBP21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 ZNF773Q6PK81 442 aa21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 ATOH1Q92858 354 aaPredicted RBP21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 RXFP3Q9NSD7 469 aa21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 COPS7AQ9UBW8 275 aa21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 THY1P04216 161 aa21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 ZNF806P0C7X5 589 aa21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 AGXTP21549 392 aa21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 CHMP24386 653 aa21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 CSNK2BP67870 215 aa21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 PLAURQ03405 335 aa21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 EBPQ15125 230 aaKnown RBP21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 OR1Q1Q15612 314 aa21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 NADK2Q4G0N4 442 aa21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 Q6ZPB1 254 aaPredicted RBP21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 ANKRD37Q7Z713 158 aa21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 SATL1Q86VE3 508 aa21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 ENTHD1Q8IYW4 607 aa21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 CNIH3Q8TBE1 160 aa21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 CNOT9Q92600 299 aaKnown RBP21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 LRFN5Q96NI6 719 aa21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 RNF6Q9Y252 685 aa21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 NTNG1Q9Y2I2 539 aa21.09■□□□□ 0.97
SCAMP3-202ENST00000355379 BDP1A6H8Y1 2624 aa21.08■□□□□ 0.97
SCAMP3-202ENST00000355379 C2orf92A0A1B0GVN3 265 aa21.08■□□□□ 0.96
SCAMP3-202ENST00000355379 AGRPO00253 132 aa21.08■□□□□ 0.96
SCAMP3-202ENST00000355379 TO15178 435 aa21.08■□□□□ 0.96
SCAMP3-202ENST00000355379 ALOX12BO75342 701 aa21.08■□□□□ 0.96
SCAMP3-202ENST00000355379 GKN3PP0CG01 181 aa21.08■□□□□ 0.96
SCAMP3-202ENST00000355379 PRG2P13727 222 aa21.08■□□□□ 0.96
SCAMP3-202ENST00000355379 CD59P13987 128 aa21.08■□□□□ 0.96
SCAMP3-202ENST00000355379 HTR2AP28223 471 aa21.08■□□□□ 0.96
SCAMP3-202ENST00000355379 PSPHP78330 225 aa21.08■□□□□ 0.96
SCAMP3-202ENST00000355379 NNATQ16517 81 aa21.08■□□□□ 0.96
SCAMP3-202ENST00000355379 BROXQ5VW32 411 aa21.08■□□□□ 0.96
SCAMP3-202ENST00000355379 FOXB2Q5VYV0 432 aa21.08■□□□□ 0.96
SCAMP3-202ENST00000355379 ZNF613Q6PF04 617 aa21.08■□□□□ 0.96
SCAMP3-202ENST00000355379 ZNF730Q6ZMV8 503 aa21.08■□□□□ 0.96
SCAMP3-202ENST00000355379 LANCL3Q6ZV70 420 aa21.08■□□□□ 0.96
SCAMP3-202ENST00000355379 RRM2BQ7LG56 351 aa21.08■□□□□ 0.96
SCAMP3-202ENST00000355379 ZNF550Q7Z398 422 aa21.08■□□□□ 0.96
SCAMP3-202ENST00000355379 NXF5Q9H1B4 397 aaKnown RBP21.08■□□□□ 0.96
SCAMP3-202ENST00000355379 DNAJB12Q9NXW2 375 aaKnown RBP21.08■□□□□ 0.96
SCAMP3-202ENST00000355379 TPRKBQ9Y3C4 175 aa21.08■□□□□ 0.96
SCAMP3-202ENST00000355379 ASCC3Q8N3C0 2202 aaKnown RBP21.08■□□□□ 0.96
SCAMP3-202ENST00000355379 IDSB3KWA1 339 aa21.07■□□□□ 0.96
SCAMP3-202ENST00000355379 B4E171 279 aa21.07■□□□□ 0.96
SCAMP3-202ENST00000355379 MEN1O00255 615 aa21.07■□□□□ 0.96
SCAMP3-202ENST00000355379 CDX4O14627 284 aaPredicted RBP21.07■□□□□ 0.96
SCAMP3-202ENST00000355379 TP53P04637 393 aaPredicted RBP21.07■□□□□ 0.96
SCAMP3-202ENST00000355379 EEF1B2P24534 225 aaKnown RBP21.07■□□□□ 0.96
SCAMP3-202ENST00000355379 ADH7P40394 386 aa21.07■□□□□ 0.96
SCAMP3-202ENST00000355379 TSPAN7P41732 249 aa21.07■□□□□ 0.96
SCAMP3-202ENST00000355379 GPR143P51810 404 aa21.07■□□□□ 0.96
SCAMP3-202ENST00000355379 HLA-DQA1Q5Y7H0 255 aa21.07■□□□□ 0.96
SCAMP3-202ENST00000355379 MBOAT2Q6ZWT7 520 aa21.07■□□□□ 0.96
SCAMP3-202ENST00000355379 SLC29A4Q7RTT9 530 aa21.07■□□□□ 0.96
SCAMP3-202ENST00000355379 PRICKLE2Q7Z3G6 844 aa21.07■□□□□ 0.96
SCAMP3-202ENST00000355379 NKAIN4Q8IVV8 208 aa21.07■□□□□ 0.96
SCAMP3-202ENST00000355379 C9orf40Q8IXQ3 194 aa21.07■□□□□ 0.96
SCAMP3-202ENST00000355379 C17orf47Q8NEP4 570 aa21.07■□□□□ 0.96
SCAMP3-202ENST00000355379 RHOXF1Q8NHV9 184 aa21.07■□□□□ 0.96
SCAMP3-202ENST00000355379 PIGXQ8TBF5 258 aa21.07■□□□□ 0.96
SCAMP3-202ENST00000355379 FAM81AQ8TBF8 368 aa21.07■□□□□ 0.96
SCAMP3-202ENST00000355379 SCN3BQ9NY72 215 aa21.07■□□□□ 0.96
SCAMP3-202ENST00000355379 SERINC4A6NH21 518 aa21.06■□□□□ 0.96
SCAMP3-202ENST00000355379 MPZL2O60487 215 aa21.06■□□□□ 0.96
SCAMP3-202ENST00000355379 ABCB7O75027 752 aa21.06■□□□□ 0.96
SCAMP3-202ENST00000355379 LYPD3O95274 346 aa21.06■□□□□ 0.96
SCAMP3-202ENST00000355379 GSSP48637 474 aa21.06■□□□□ 0.96
SCAMP3-202ENST00000355379 EMP2P54851 167 aa21.06■□□□□ 0.96
SCAMP3-202ENST00000355379 CDC42P60953 191 aa21.06■□□□□ 0.96
SCAMP3-202ENST00000355379 TSPAN31Q12999 210 aa21.06■□□□□ 0.96
SCAMP3-202ENST00000355379 KLHL26Q53HC5 615 aa21.06■□□□□ 0.96
SCAMP3-202ENST00000355379 SLX4IPQ5VYV7 408 aa21.06■□□□□ 0.96
SCAMP3-202ENST00000355379 MRPL14Q6P1L8 145 aaKnown RBP21.06■□□□□ 0.96
SCAMP3-202ENST00000355379 BORAQ6PGQ7 559 aa21.06■□□□□ 0.96
SCAMP3-202ENST00000355379 RBM44Q6ZP01 1051 aaKnown RBP21.06■□□□□ 0.96
SCAMP3-202ENST00000355379 RNF113BQ8IZP6 322 aaKnown RBP21.06■□□□□ 0.96
SCAMP3-202ENST00000355379 ZNF614Q8N883 585 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms