RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 SUSD5O60279 629 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 TGM6O95932 706 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 SERPIND1P05546 499 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 PPP3CBP16298 524 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 STAT5AP42229 794 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 GMFBP60983 142 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 POLR2GP62487 172 aaKnown RBP eCLIP7.15□□□□□ -1.26
BRCA1-201ENST00000352993 SIM1P81133 766 aaPredicted RBP7.15□□□□□ -1.26
BRCA1-201ENST00000352993 CDK5Q00535 292 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 ZNF155Q12901 538 aaPredicted RBP7.15□□□□□ -1.26
BRCA1-201ENST00000352993 AKIRIN2Q53H80 203 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 PLBD1Q6P4A8 553 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 CD300LGQ6UXG3 332 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 USP50Q70EL3 339 aaPredicted RBP7.15□□□□□ -1.26
BRCA1-201ENST00000352993 PRICKLE2Q7Z3G6 844 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 OR5T2Q8NGG2 359 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 OR52B4Q8NGK2 314 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 OR13C5Q8NGS8 318 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 TNFAIP8L1Q8WVP5 186 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 ECHDC3Q96DC8 303 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 PDXPQ96GD0 296 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 TDP1Q9NUW8 608 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 BABAM2Q9NXR7 383 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 CBLCQ9ULV8 474 aa7.15□□□□□ -1.26
BRCA1-201ENST00000352993 AK6Q9Y3D8 172 aaKnown RBP7.15□□□□□ -1.26
BRCA1-201ENST00000352993 SIRT4Q9Y6E7 314 aaPredicted RBP7.15□□□□□ -1.26
BRCA1-201ENST00000352993 RB1P06400 928 aa7.15□□□□□ -1.27
BRCA1-201ENST00000352993 FGF2P09038 288 aa7.15□□□□□ -1.27
BRCA1-201ENST00000352993 ATP1B2P14415 290 aaPredicted RBP7.15□□□□□ -1.27
BRCA1-201ENST00000352993 HSD3B2P26439 372 aa7.15□□□□□ -1.27
BRCA1-201ENST00000352993 TRIM23P36406 574 aa7.15□□□□□ -1.27
BRCA1-201ENST00000352993 KCNJ5P48544 419 aa7.15□□□□□ -1.27
BRCA1-201ENST00000352993 MEOX2P50222 304 aa7.15□□□□□ -1.27
BRCA1-201ENST00000352993 CCR8P51685 355 aa7.15□□□□□ -1.27
BRCA1-201ENST00000352993 RAP2BP61225 183 aa7.15□□□□□ -1.27
BRCA1-201ENST00000352993 TLE2Q04725 743 aa7.15□□□□□ -1.27
BRCA1-201ENST00000352993 PLD1Q13393 1074 aa7.15□□□□□ -1.27
BRCA1-201ENST00000352993 RPTNQ6XPR3 784 aa7.15□□□□□ -1.27
BRCA1-201ENST00000352993 TMEM185AQ8NFB2 350 aa7.15□□□□□ -1.27
BRCA1-201ENST00000352993 SMAP2Q8WU79 429 aaPredicted RBP7.15□□□□□ -1.27
BRCA1-201ENST00000352993 THAP4Q8WY91 577 aa7.15□□□□□ -1.27
BRCA1-201ENST00000352993 KCTD12Q96CX2 325 aaKnown RBP7.15□□□□□ -1.27
BRCA1-201ENST00000352993 QRSL1Q9H0R6 528 aaKnown RBP7.15□□□□□ -1.27
BRCA1-201ENST00000352993 DNTTIP1Q9H147 329 aa7.15□□□□□ -1.27
BRCA1-201ENST00000352993 BRF2Q9HAW0 419 aa7.15□□□□□ -1.27
BRCA1-201ENST00000352993 BIN3Q9NQY0 253 aa7.15□□□□□ -1.27
BRCA1-201ENST00000352993 STOX2Q9P2F5 926 aaPredicted RBP7.15□□□□□ -1.27
BRCA1-201ENST00000352993 A4GNTQ9UNA3 340 aa7.15□□□□□ -1.27
BRCA1-201ENST00000352993 FRMPD3Q5JV73 1810 aa7.15□□□□□ -1.27
BRCA1-201ENST00000352993 PLSCR5A0PG75 271 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 H0YIV9 168 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 RASGRP1O95267 797 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 IGF2P01344 180 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 CLTBP09497 229 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 ALPPL2P10696 532 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 UGT2B7P16662 529 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 PSMA3P25788 255 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 ACADLP28330 430 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 STXBP1P61764 594 aaKnown RBP7.14□□□□□ -1.27
BRCA1-201ENST00000352993 AP1S1P61966 158 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 B4GALNT1Q00973 533 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 FGL1Q08830 312 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 IKZF1Q13422 519 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 ACSM3Q53FZ2 586 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 CCDC157Q569K6 752 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 EOGTQ5NDL2 527 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 ZNF697Q5TEC3 545 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 HACD4Q5VWC8 232 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 GLB1LQ6UWU2 654 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 PXT1Q8NFP0 134 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 MRPS24Q96EL2 167 aaKnown RBP7.14□□□□□ -1.27
BRCA1-201ENST00000352993 UBL7Q96S82 380 aaPredicted RBP7.14□□□□□ -1.27
BRCA1-201ENST00000352993 MFFQ9GZY8 342 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 A0A0G2JN53 185 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 UGDHO60701 494 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 KLKB1P03952 638 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 RLN2P04090 185 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 HMGN1P05114 100 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 SERPINA4P29622 427 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 PYCR1P32322 319 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 TNFRSF17Q02223 184 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 PRSS53Q2L4Q9 553 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 HSD17B13Q7Z5P4 300 aaPredicted RBP7.14□□□□□ -1.27
BRCA1-201ENST00000352993 CAMKMTQ7Z624 323 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 LRRTM4Q86VH4 590 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 TMEM17Q86X19 198 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 CFAP206Q8IYR0 622 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 LILRA3Q8N6C8 439 aaPredicted RBP7.14□□□□□ -1.27
BRCA1-201ENST00000352993 SIRT6Q8N6T7 355 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 PIGXQ8TBF5 258 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 GNPDA2Q8TDQ7 276 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 KLK6Q92876 244 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 SCAMP4Q969E2 229 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 CXorf40BQ96DE9 158 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 KATNBL1Q9H079 304 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 SLC6A5Q9Y345 797 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 BACE2Q9Y5Z0 518 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 CHD5Q8TDI0 1954 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 A0A087WUU8 490 aa7.14□□□□□ -1.27
BRCA1-201ENST00000352993 H3BNC9 293 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms