RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 CLEC6AQ6EIG7 209 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 CGB2Q6NT52 195 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 ZNF704Q6ZNC4 412 aaPredicted RBP4.8□□□□□ -1.64
VCAM1-202ENST00000347652 RNF165Q6ZSG1 346 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 SLC46A3Q7Z3Q1 461 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 PRSS42Q7Z5A4 293 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 KIRREL3Q8IZU9 778 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 CDYL2Q8N8U2 506 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 ZNF740Q8NDX6 193 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 WDR20Q8TBZ3 569 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 PIWIL2Q8TC59 973 aaKnown RBP4.8□□□□□ -1.64
VCAM1-202ENST00000347652 CHMP6Q96FZ7 201 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 BSCL2Q96G97 398 aaPredicted RBP4.8□□□□□ -1.64
VCAM1-202ENST00000347652 NSMCE2Q96MF7 247 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 AIF1LQ9BQI0 150 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 PRRG3Q9BZD7 231 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 CHRNA10Q9GZZ6 450 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 FBXO34Q9NWN3 711 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 GALNT8Q9NY28 637 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 ONECUT1Q9UBC0 465 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 GDF2Q9UK05 429 aaPredicted RBP4.8□□□□□ -1.64
VCAM1-202ENST00000347652 TSC22D4Q9Y3Q8 395 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 TMEM184BQ9Y519 407 aaPredicted RBP4.8□□□□□ -1.64
VCAM1-202ENST00000347652 IGHV5-10-1A0A0J9YXX1 117 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 LOC102723971A0A1B0GUV8 181 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 OOEPA6NGQ2 149 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 SLCO1B7G3V0H7 640 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 MANBAO00462 879 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 SLC22A2O15244 555 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 KCNAB3O43448 404 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 CTSVO60911 334 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 ANKRD34CP0C6C1 535 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 THRAP10827 490 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 EZRP15311 586 aaKnown RBP4.79□□□□□ -1.64
VCAM1-202ENST00000347652 ARL1P40616 181 aaPredicted RBP4.79□□□□□ -1.64
VCAM1-202ENST00000347652 MAGEB1P43366 347 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 PNLIPRP2P54317 469 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 SNU13P55769 128 aaKnown RBP4.79□□□□□ -1.64
VCAM1-202ENST00000347652 RPS15AP62244 130 aaKnown RBP4.79□□□□□ -1.64
VCAM1-202ENST00000347652 E2F1Q01094 437 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 ZNF33BQ06732 778 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 RASGEF1BQ0VAM2 473 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 CDK5R2Q13319 367 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 CPSF6Q16630 551 aaKnown RBP eCLIP4.79□□□□□ -1.64
VCAM1-202ENST00000347652 HIST2H2ACQ16777 129 aaPredicted RBP4.79□□□□□ -1.64
VCAM1-202ENST00000347652 AP5B1Q2VPB7 878 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 FBLN7Q53RD9 439 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 TCHHL1Q5QJ38 904 aaPredicted RBP4.79□□□□□ -1.64
VCAM1-202ENST00000347652 HIST2H2AA3Q6FI13 130 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 MED27Q6P2C8 311 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 SHISA2Q6UWI4 295 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 TMIGD1Q6UXZ0 262 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 CFAP77Q6ZQR2 320 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 LIAT1Q6ZQX7 453 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 BEND4Q6ZU67 534 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 NCCRP1Q6ZVX7 275 aaPredicted RBP4.79□□□□□ -1.64
VCAM1-202ENST00000347652 ARHGAP22Q7Z5H3 698 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.79□□□□□ -1.64
VCAM1-202ENST00000347652 DNAJC22Q8N4W6 341 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 MFSD9Q8NBP5 474 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 OR6S1Q8NH40 331 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 PTPMT1Q8WUK0 201 aaPredicted RBP4.79□□□□□ -1.64
VCAM1-202ENST00000347652 UBE2E3Q969T4 207 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 TPD52L3Q96J77 140 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 FAR2Q96K12 515 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 GFM1Q96RP9 751 aaKnown RBP4.79□□□□□ -1.64
VCAM1-202ENST00000347652 TUBB1Q9H4B7 451 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 ZNF768Q9H5H4 540 aaKnown RBP4.79□□□□□ -1.64
VCAM1-202ENST00000347652 EXO5Q9H790 373 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 SYNPO2LQ9H987 977 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 CALHM2Q9HA72 323 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 FAM60AQ9NP50 221 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 YAE1D1Q9NRH1 226 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 LIN7CQ9NUP9 197 aaKnown RBP4.79□□□□□ -1.64
VCAM1-202ENST00000347652 NUDT15Q9NV35 164 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 FAM118AQ9NWS6 357 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 AHSPQ9NZD4 102 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 BTRCQ9Y297 605 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 DNAJC15Q9Y5T4 150 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 ANKRD12Q6UB98 2062 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 MAGEA13PA6NCF6 341 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 D6RAR5 112 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 FFAR3O14843 346 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 GPR42O15529 346 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 OR1F1O43749 312 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 CRCPO75575 148 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 ZBTB11O95625 1053 aaPredicted RBP4.79□□□□□ -1.64
VCAM1-202ENST00000347652 MT-CO3P00414 261 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 PDYNP01213 254 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 KRT6AP02538 564 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 KRT6BP04259 564 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 BMP2P12643 396 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 DRD4P21917 467 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 GSTM2P28161 218 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 HMOX2P30519 316 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 AHRP35869 848 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 DLSTP36957 453 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 GABRA4P48169 554 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 KRT6CP48668 564 aa4.79□□□□□ -1.64
VCAM1-202ENST00000347652 HTR6P50406 440 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms