RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 FMO6PO60774 539 aa19.82■□□□□ 0.76
TSPAN3-202ENST00000346495 RYKP34925 604 aa19.82■□□□□ 0.76
TSPAN3-202ENST00000346495 UGT2B15P54855 530 aa19.82■□□□□ 0.76
TSPAN3-202ENST00000346495 HOXC5Q00444 222 aa19.82■□□□□ 0.76
TSPAN3-202ENST00000346495 FGFBP1Q14512 234 aa19.82■□□□□ 0.76
TSPAN3-202ENST00000346495 KCTD21Q4G0X4 260 aa19.82■□□□□ 0.76
TSPAN3-202ENST00000346495 DCAF12Q5T6F0 453 aa19.82■□□□□ 0.76
TSPAN3-202ENST00000346495 TOR1AIP2Q8NFQ8 470 aa19.82■□□□□ 0.76
TSPAN3-202ENST00000346495 ADAMTS16Q8TE57 1224 aa19.82■□□□□ 0.76
TSPAN3-202ENST00000346495 MR1Q95460 341 aa19.82■□□□□ 0.76
TSPAN3-202ENST00000346495 SLC35B4Q969S0 331 aa19.82■□□□□ 0.76
TSPAN3-202ENST00000346495 PITX2Q99697 317 aa19.82■□□□□ 0.76
TSPAN3-202ENST00000346495 PRRX2Q99811 253 aa19.82■□□□□ 0.76
TSPAN3-202ENST00000346495 APOL4Q9BPW4 351 aa19.82■□□□□ 0.76
TSPAN3-202ENST00000346495 WWTR1Q9GZV5 400 aa19.82■□□□□ 0.76
TSPAN3-202ENST00000346495 NCDNQ9UBB6 729 aa19.82■□□□□ 0.76
TSPAN3-202ENST00000346495 C19orf25Q9UFG5 118 aaPredicted RBP19.82■□□□□ 0.76
TSPAN3-202ENST00000346495 NDRG4Q9ULP0 352 aaKnown RBP19.82■□□□□ 0.76
TSPAN3-202ENST00000346495 VPS13AQ96RL7 3174 aa19.82■□□□□ 0.76
TSPAN3-202ENST00000346495 C9J4A7 227 aa19.81■□□□□ 0.76
TSPAN3-202ENST00000346495 E9PQ18 207 aa19.81■□□□□ 0.76
TSPAN3-202ENST00000346495 TO15178 435 aa19.81■□□□□ 0.76
TSPAN3-202ENST00000346495 POU2F1P14859 743 aa19.81■□□□□ 0.76
TSPAN3-202ENST00000346495 LCN1P31025 176 aa19.81■□□□□ 0.76
TSPAN3-202ENST00000346495 GPR143P51810 404 aa19.81■□□□□ 0.76
TSPAN3-202ENST00000346495 CDCP2Q5VXM1 449 aa19.81■□□□□ 0.76
TSPAN3-202ENST00000346495 PGBD2Q6P3X8 592 aa19.81■□□□□ 0.76
TSPAN3-202ENST00000346495 TMEM205Q6UW68 189 aa19.81■□□□□ 0.76
TSPAN3-202ENST00000346495 B3GNT7Q8NFL0 401 aa19.81■□□□□ 0.76
TSPAN3-202ENST00000346495 SLC41A3Q96GZ6 507 aa19.81■□□□□ 0.76
TSPAN3-202ENST00000346495 DGCR6LQ9BY27 220 aa19.81■□□□□ 0.76
TSPAN3-202ENST00000346495 PCDHGA1Q9Y5H4 931 aa19.81■□□□□ 0.76
TSPAN3-202ENST00000346495 IGHV3-20A0A0C4DH32 117 aa19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 SMIM18P0DKX4 95 aa19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 ITIH1P19827 911 aa19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 PSPHP78330 225 aa19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 RPP38P78345 283 aaKnown RBP19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 TCF15Q12870 199 aa19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 RAPSNQ13702 412 aa19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 ISXQ2M1V0 245 aa19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 RAB11FIP2Q7L804 512 aa19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 GDF7Q7Z4P5 450 aa19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 CPEB2Q7Z5Q1 589 aaKnown RBP19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 C17orf47Q8NEP4 570 aa19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 NFAM1Q8NET5 270 aaPredicted RBP19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 OR4K5Q8NGD3 323 aa19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 PMEPA1Q969W9 287 aa19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 EFHD2Q96C19 240 aaPredicted RBP19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 HRASLS5Q96KN8 279 aa19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 ZPBPQ9BS86 351 aa19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 MRPS26Q9BYN8 205 aaKnown RBP19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 UCK2Q9BZX2 261 aa19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 SEMA4CQ9C0C4 833 aa19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 AKIRIN1Q9H9L7 192 aaPredicted RBP19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 PPIEQ9UNP9 301 aaKnown RBP19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 NTNG1Q9Y2I2 539 aa19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 TRAPPC13A5PLN9 417 aa19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 GKN3PP0CG01 181 aa19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 PRG2P13727 222 aa19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 IFNGR2P38484 337 aa19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 RNF144AP50876 292 aaPredicted RBP19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 ISL1P61371 349 aa19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 PAPD4Q6PIY7 484 aaKnown RBP19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 KLHL17Q6TDP4 642 aa19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 ZNF527Q8NB42 609 aa19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 CNOT9Q92600 299 aaKnown RBP19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 HSPBAP1Q96EW2 488 aa19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 LIN37Q96GY3 246 aaPredicted RBP19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 LMF1Q96S06 567 aa19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 LPAR4Q99677 370 aa19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 ZNF559Q9BR84 538 aa19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 PARD6AQ9NPB6 346 aa19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 UBQLN4Q9NRR5 601 aa19.8■□□□□ 0.76
TSPAN3-202ENST00000346495 SERINC4A6NH21 518 aa19.79■□□□□ 0.76
TSPAN3-202ENST00000346495 PRKNO60260 465 aaPredicted RBP19.79■□□□□ 0.76
TSPAN3-202ENST00000346495 EPHA2P29317 976 aa19.79■□□□□ 0.76
TSPAN3-202ENST00000346495 KRT20P35900 424 aa19.79■□□□□ 0.76
TSPAN3-202ENST00000346495 ETV5P41161 510 aa19.79■□□□□ 0.76
TSPAN3-202ENST00000346495 NR0B1P51843 470 aaKnown RBP19.79■□□□□ 0.76
TSPAN3-202ENST00000346495 ESRRGP62508 458 aa19.79■□□□□ 0.76
TSPAN3-202ENST00000346495 IL5RAQ01344 420 aa19.79■□□□□ 0.76
TSPAN3-202ENST00000346495 PLAURQ03405 335 aa19.79■□□□□ 0.76
TSPAN3-202ENST00000346495 CD47Q08722 323 aa19.79■□□□□ 0.76
TSPAN3-202ENST00000346495 TARDBPQ13148 414 aaKnown RBP eCLIP19.79■□□□□ 0.764e-14■■□□□ 14.4
TSPAN3-202ENST00000346495 FAM198BQ6UWH4 519 aa19.79■□□□□ 0.76
TSPAN3-202ENST00000346495 ZNF550Q7Z398 422 aa19.79■□□□□ 0.76
TSPAN3-202ENST00000346495 ZNF441Q8N8Z8 693 aa19.79■□□□□ 0.76
TSPAN3-202ENST00000346495 PRSS33Q8NF86 280 aa19.79■□□□□ 0.76
TSPAN3-202ENST00000346495 TSPAN14Q8NG11 270 aa19.79■□□□□ 0.76
TSPAN3-202ENST00000346495 OR4C3Q8NH37 302 aa19.79■□□□□ 0.76
TSPAN3-202ENST00000346495 DNAJB12Q9NXW2 375 aaKnown RBP19.79■□□□□ 0.76
TSPAN3-202ENST00000346495 B3GALT1Q9Y5Z6 326 aa19.79■□□□□ 0.76
TSPAN3-202ENST00000346495 GPR179Q6PRD1 2367 aa19.78■□□□□ 0.76
TSPAN3-202ENST00000346495 A0A087WUU8 490 aa19.78■□□□□ 0.76
TSPAN3-202ENST00000346495 BCAS1O75363 584 aaPredicted RBP19.78■□□□□ 0.76
TSPAN3-202ENST00000346495 CSO75390 466 aaKnown RBP19.78■□□□□ 0.76
TSPAN3-202ENST00000346495 HTR2AP28223 471 aa19.78■□□□□ 0.76
TSPAN3-202ENST00000346495 ELK4P28324 431 aa19.78■□□□□ 0.76
TSPAN3-202ENST00000346495 NUP107P57740 925 aa19.78■□□□□ 0.76
TSPAN3-202ENST00000346495 COX10Q12887 443 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms