RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 ZSWIM9Q86XI8 627 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 TMEM80Q96HE8 168 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 AGAP4Q96P64 663 aa10.25□□□□□ -0.77
CLCN6-202ENST00000346436 KLF13Q9Y2Y9 288 aaPredicted RBP10.25□□□□□ -0.77
CLCN6-202ENST00000346436 ARGFXA6NJG6 315 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 KLKB1P03952 638 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 PVALBP20472 110 aaPredicted RBP10.24□□□□□ -0.77
CLCN6-202ENST00000346436 CYB561P49447 251 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 TPMTP51580 245 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 OR12D2P58182 307 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 SLC35F1Q5T1Q4 408 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 C19orf47Q8N9M1 422 aaKnown RBP10.24□□□□□ -0.77
CLCN6-202ENST00000346436 OR9A2Q8NGT5 310 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 OR2L2Q8NH16 312 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 C22orf15Q8WYQ4 148 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 OSTF1Q92882 214 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 UBE2FQ969M7 185 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 SGTBQ96EQ0 304 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 ELF4Q99607 663 aaPredicted RBP10.24□□□□□ -0.77
CLCN6-202ENST00000346436 MND1Q9BWT6 205 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 EHD1Q9H4M9 534 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 EVA1AQ9H8M9 152 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 ING4Q9UNL4 249 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 KIF13BQ9NQT8 1826 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 UBR3Q6ZT12 1888 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 PRAMEF33A0A0G2JMD5 474 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 C2orf72A6NCS6 295 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 ANKRD30BLA7E2S9 258 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 DLL1O00548 723 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 HOXC11O43248 304 aaPredicted RBP10.24□□□□□ -0.77
CLCN6-202ENST00000346436 PRAMEF10O60809 474 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 EDNRAP25101 427 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 AK4P27144 223 aaPredicted RBP10.24□□□□□ -0.77
CLCN6-202ENST00000346436 SWI5Q1ZZU3 235 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 ZNF551Q7Z340 670 aaPredicted RBP10.24□□□□□ -0.77
CLCN6-202ENST00000346436 TMEM173Q86WV6 379 aaPredicted RBP10.24□□□□□ -0.77
CLCN6-202ENST00000346436 JAGN1Q8N5M9 183 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 OR52E1Q8NGJ3 308 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 C9orf43Q8TAL5 461 aaPredicted RBP10.24□□□□□ -0.77
CLCN6-202ENST00000346436 PIP5K1AQ99755 562 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 TARM1B6A8C7 271 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 IL2RAP01589 272 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 CXCL10P02778 98 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 RETP07949 1114 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 SPARCP09486 303 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 ALDH3B2P48448 385 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 KIAA1024LP59773 190 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 RGNQ15493 299 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 C22orf42Q6IC83 251 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 SLC44A3Q8N4M1 653 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 CDRT4Q8N9R6 151 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 HOXB13Q92826 284 aaPredicted RBP10.24□□□□□ -0.77
CLCN6-202ENST00000346436 OR5B2Q96R09 309 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 GAL3ST1Q99999 423 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 CXXC1Q9P0U4 656 aaPredicted RBP10.24□□□□□ -0.77
CLCN6-202ENST00000346436 IL20RAQ9UHF4 553 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 A6NIZ1 184 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 ARNTLO00327 626 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 PHYHO14832 338 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 CFL1P23528 166 aaKnown RBP10.24□□□□□ -0.77
CLCN6-202ENST00000346436 NR4A2P43354 598 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 FASLGP48023 281 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 RAP1BP61224 184 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 RAP1AP62834 184 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 GINS1Q14691 196 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 ALG10BQ5I7T1 473 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 SLC7A5P1Q8MH63 180 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 TEX26Q8N6G2 289 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 ZNF548Q8NEK5 533 aaPredicted RBP10.24□□□□□ -0.77
CLCN6-202ENST00000346436 OR1J4Q8NGS1 313 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 NEDD4LQ96PU5 975 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 SLC22A12Q96S37 553 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 TTYH2Q9BSA4 534 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 WACQ9BTA9 647 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 SLC22A4Q9H015 551 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 CLMPQ9H6B4 373 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 RDH8Q9NYR8 311 aa10.24□□□□□ -0.77
CLCN6-202ENST00000346436 J3KTA2 159 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 LATO43561 262 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 MRPL33O75394 65 aaKnown RBP10.23□□□□□ -0.77
CLCN6-202ENST00000346436 ARL6IP5O75915 188 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 TIMP2P16035 220 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 FADDQ13158 208 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 E2F2Q14209 437 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 CDK10Q15131 360 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 UGT3A2Q3SY77 523 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 SLC25A25Q6KCM7 469 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 LHFPL3Q86UP9 236 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 TSPYL5Q86VY4 417 aaPredicted RBP10.23□□□□□ -0.77
CLCN6-202ENST00000346436 GORASP2Q9H8Y8 452 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 IL37Q9NZH6 218 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 TNFRSF10DQ9UBN6 386 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 RDH16O75452 317 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 DDAH2O95865 285 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 IFNA21P01568 189 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 TAS2R43P59537 309 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 EEF1A1P68104 462 aaKnown RBP10.23□□□□□ -0.77
CLCN6-202ENST00000346436 TLE3Q04726 772 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 SLC14A2Q15849 920 aa10.23□□□□□ -0.77
CLCN6-202ENST00000346436 WSCD2Q2TBF2 565 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms