RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 ZNF689Q96CS4 500 aaPredicted RBP18.35■□□□□ 0.53
HDAC4-201ENST00000345617 NWD2Q9ULI1 1742 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 C8AP07357 584 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 GIFP27352 417 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 MPEG1Q2M385 716 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 TMEM135Q86UB9 458 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 ARL14EPQ8N8R7 260 aaPredicted RBP18.35■□□□□ 0.53
HDAC4-201ENST00000345617 NAXEQ8NCW5 288 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 SCAMP5Q8TAC9 235 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 OR1E3Q8WZA6 343 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 SMLR1H3BR10 107 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 ARPC1BO15143 372 aaKnown RBP18.35■□□□□ 0.53
HDAC4-201ENST00000345617 KITLGP21583 273 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 IL4RP24394 825 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 KIAA1143Q96AT1 154 aaPredicted RBP18.35■□□□□ 0.53
HDAC4-201ENST00000345617 WNT7AO00755 349 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 KCNJ5P48544 419 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 SGSHP51688 502 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 RPS21P63220 83 aaKnown RBP18.35■□□□□ 0.53
HDAC4-201ENST00000345617 C19orf35Q6ZS72 473 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 PLPP5Q8NEB5 264 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 C11orf84Q9BUA3 381 aaPredicted RBP18.35■□□□□ 0.53
HDAC4-201ENST00000345617 PITHD1Q9GZP4 211 aaPredicted RBP18.35■□□□□ 0.53
HDAC4-201ENST00000345617 SLC6A8P48029 635 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 CNN3Q15417 329 aaKnown RBP18.35■□□□□ 0.53
HDAC4-201ENST00000345617 OR52N2Q8NGI0 321 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 DDX1Q92499 740 aaKnown RBP18.35■□□□□ 0.53
HDAC4-201ENST00000345617 RAB8BQ92930 207 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 MICU1Q9BPX6 476 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 MMP28Q9H239 520 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 WIF1Q9Y5W5 379 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 ETV7Q9Y603 341 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 C10orf90Q96M02 699 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 CWH43Q9H720 699 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 SIAEQ9HAT2 523 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 TRAV18A0A075B6X5 111 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 PRSS58Q8IYP2 241 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 OR52E2Q8NGJ4 325 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 FBXL4Q9UKA2 621 aa18.35■□□□□ 0.53
HDAC4-201ENST00000345617 DVL2O14641 736 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 GALTP07902 379 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 RPS24P62847 133 aaKnown RBP18.34■□□□□ 0.53
HDAC4-201ENST00000345617 LRP8Q14114 963 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 ZNF74Q16587 644 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.34■□□□□ 0.53
HDAC4-201ENST00000345617 MCOLN1Q9GZU1 580 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 NIPAL2Q9H841 368 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 K7EPK0 472 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 FADS1O60427 444 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 ALPIP09923 528 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 GDF5P43026 501 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 SOHLH1Q5JUK2 328 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 FAM71E2Q8N5Q1 922 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 OR51A7Q8NH64 312 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 CLEC4CQ8WTT0 213 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 GRXCR1A8MXD5 290 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 H3BSH0 61 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 MAT2AP31153 395 aaKnown RBP18.34■□□□□ 0.53
HDAC4-201ENST00000345617 ZNF266Q14584 549 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 CATSPEREQ5SY80 951 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 SFRP4Q6FHJ7 346 aaPredicted RBP18.34■□□□□ 0.53
HDAC4-201ENST00000345617 ABHD12BQ7Z5M8 362 aaPredicted RBP18.34■□□□□ 0.53
HDAC4-201ENST00000345617 PSAT1Q9Y617 370 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 A0A1W2PPK0 400 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 TAS2R38P59533 333 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 SF3B4Q15427 424 aaKnown RBP eCLIP18.34■□□□□ 0.533e-7■■■■■ 39.3
HDAC4-201ENST00000345617 FAM205BPQ63HN1 556 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 SBSNQ6UWP8 590 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 SLC2A4RGQ9NR83 387 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 A0A1B0GV50 99 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 STK19P49842 368 aaPredicted RBP18.34■□□□□ 0.53
HDAC4-201ENST00000345617 TBPL1P62380 186 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 KCNJ8Q15842 424 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 GCM1Q9NP62 436 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 FBXL12Q9NXK8 326 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 STK17BO94768 372 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 AGTR2P50052 363 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 PLCXD2Q0VAA5 305 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 OR5D16Q8NGK9 328 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 SLAMF9Q96A28 289 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 UHRF2Q96PU4 802 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 RBFOX1Q9NWB1 397 aaKnown RBP18.34■□□□□ 0.53
HDAC4-201ENST00000345617 ZNF623O75123 536 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 PLBD1Q6P4A8 553 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 OR4Q3Q8NH05 313 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 OR51Q1Q8NH59 317 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 WDR20Q8TBZ3 569 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 ARPC5LQ9BPX5 153 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 NOX3Q9HBY0 568 aa18.34■□□□□ 0.53
HDAC4-201ENST00000345617 ANGPTL7O43827 346 aa18.33■□□□□ 0.53
HDAC4-201ENST00000345617 KNG1P01042 644 aa18.33■□□□□ 0.53
HDAC4-201ENST00000345617 SYPL2Q5VXT5 272 aa18.33■□□□□ 0.53
HDAC4-201ENST00000345617 GATA6Q92908 595 aa18.33■□□□□ 0.53
HDAC4-201ENST00000345617 TTTY10Q9BZA0 68 aa18.33■□□□□ 0.53
HDAC4-201ENST00000345617 PATZ1Q9HBE1 687 aaKnown RBP18.33■□□□□ 0.53
HDAC4-201ENST00000345617 PCDHGA7Q9Y5G6 932 aa18.33■□□□□ 0.53
HDAC4-201ENST00000345617 C1GALT1C1LP0DN25 315 aa18.33■□□□□ 0.53
HDAC4-201ENST00000345617 LRRC56Q8IYG6 542 aaPredicted RBP18.33■□□□□ 0.53
HDAC4-201ENST00000345617 PRAP1Q96NZ9 151 aa18.33■□□□□ 0.53
HDAC4-201ENST00000345617 PCDHA9Q9Y5H5 950 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms