RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 ZNF850A8MQ14 1090 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 TSPAN6O43657 245 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 H2BFMP0C1H6 154 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 PTPN2P17706 415 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 SGSHP51688 502 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 UBE2NLQ5JXB2 153 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 VASNQ6EMK4 673 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 LCN10Q6JVE6 187 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 DPPA2Q7Z7J5 298 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 PRSS58Q8IYP2 241 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 ZNF283Q8N7M2 679 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 SLAMF9Q96A28 289 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 DGAT2Q96PD7 388 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 CNTNAP3Q9BZ76 1288 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 PUS1Q9Y606 427 aaKnown RBP eCLIP11.43□□□□□ -0.58
COL12A1-202ENST00000345356 TRAV20A0A0B4J274 112 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 RNASET2O00584 256 aaKnown RBP11.43□□□□□ -0.58
COL12A1-202ENST00000345356 SCGB1D1O95968 90 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 GASTP01350 101 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 TGM1P22735 817 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 CAV2P51636 162 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 NRG3P56975 720 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 GHRHRQ02643 423 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 P2RY14Q15391 338 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 GPR26Q8NDV2 337 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 GPR150Q8NGU9 434 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 OR14C36Q8NHC7 312 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 C2orf15Q8WU43 125 aaKnown RBP11.43□□□□□ -0.58
COL12A1-202ENST00000345356 SUSD3Q96L08 255 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 C20orf85Q9H1P6 137 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 ACTL7AQ9Y615 435 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 MYH1P12882 1939 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 MYH4Q9Y623 1939 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 PSMB10P40306 273 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 PPA1Q15181 289 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 TANGO2Q6ICL3 276 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 GAREM2Q75VX8 874 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 TRIM46Q7Z4K8 759 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 LRRTM4Q86VH4 590 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 RASGRP3Q8IV61 690 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 MFSD6LQ8IWD5 586 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 REM2Q8IYK8 340 aaPredicted RBP11.43□□□□□ -0.58
COL12A1-202ENST00000345356 TMEM130Q8N3G9 435 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 FBXO22Q8NEZ5 403 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 OR52H1Q8NGJ2 320 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 OR10Z1Q8NGY1 313 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 IL36AQ9UHA7 158 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 A0A1W2PS29 197 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 SOX1O00570 391 aaPredicted RBP11.43□□□□□ -0.58
COL12A1-202ENST00000345356 CXADRP78310 365 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 FCRLAQ7L513 359 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 OTOP2Q7RTS6 562 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 GLB1L2Q8IW92 636 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 PRRT1Q99946 306 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 WDR83Q9BRX9 315 aaKnown RBP11.43□□□□□ -0.58
COL12A1-202ENST00000345356 NARFLQ9H6Q4 476 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 E2F3O00716 465 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 MAOBP27338 520 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 ETV6P41212 452 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 PDGFRLQ15198 375 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 PODNL1Q6PEZ8 512 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 GPAT4Q86UL3 456 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 OR4K14Q8NGD5 310 aa11.43□□□□□ -0.58
COL12A1-202ENST00000345356 RRNAD1Q96FB5 475 aaKnown RBP11.43□□□□□ -0.58
COL12A1-202ENST00000345356 OR6C6A6NF89 314 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 FAM183AA6NL82 134 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 A8MVJ9 347 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 UBL3O95164 117 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 SYPP08247 313 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 GABRA3P34903 492 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 AHRP35869 848 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 RIDAP52758 137 aaKnown RBP11.42□□□□□ -0.58
COL12A1-202ENST00000345356 JAG1P78504 1218 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 TMEM115Q12893 351 aaPredicted RBP11.42□□□□□ -0.58
COL12A1-202ENST00000345356 PDSS1Q5T2R2 415 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 LSMEM1Q8N8F7 131 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 CAMKVQ8NCB2 501 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 SLC22A18Q96BI1 424 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 SEC22CQ9BRL7 303 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 PNO1Q9NRX1 252 aaKnown RBP11.42□□□□□ -0.58
COL12A1-202ENST00000345356 ADAM18Q9Y3Q7 739 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 D6RAR5 112 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 ADAM10O14672 748 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 MASP1P48740 699 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 EMP3P54852 163 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 RAB4BP61018 213 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 GPR176Q14439 515 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 HMGN3Q15651 99 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 HIST2H3PS2Q5TEC6 136 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 Q6ZVL8 140 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 BPHLQ86WA6 291 aaPredicted RBP11.42□□□□□ -0.58
COL12A1-202ENST00000345356 NLGN4XQ8N0W4 816 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 RNF141Q8WVD5 230 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 KLK6Q92876 244 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 SCAMP4Q969E2 229 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 SEC22AQ96IW7 307 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 EGLN2Q96KS0 407 aa11.42□□□□□ -0.58
COL12A1-202ENST00000345356 RBM38Q9H0Z9 239 aaKnown RBP11.42□□□□□ -0.58
COL12A1-202ENST00000345356 ZMAT5Q9UDW3 170 aaKnown RBP11.42□□□□□ -0.58
COL12A1-202ENST00000345356 C3P01024 1663 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms