RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 PRAMEF8Q5VWM4 474 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 PRAMEF7Q5VXH5 474 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 BICRALQ6AI39 1079 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 REP15Q6BDI9 236 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 LRRC74BQ6ZQY2 392 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 ARPINQ7Z6K5 226 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 GALNT10Q86SR1 603 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 PLCZ1Q86YW0 608 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 OR4K17Q8NGC6 315 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 OR8J3Q8NGG0 315 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 OR4C3Q8NH37 302 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 BARD1Q99728 777 aaKnown RBP10.82□□□□□ -0.68
SNCA-202ENST00000345009 HOPXQ9BPY8 73 aaPredicted RBP10.82□□□□□ -0.68
SNCA-202ENST00000345009 ECSITQ9BQ95 431 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 SPATA9Q9BWV2 254 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 ZNF350Q9GZX5 532 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 ARMC7Q9H6L4 198 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 LDAHQ9H6V9 325 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 PGPEP1Q9NXJ5 209 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 SLC25A37Q9NYZ2 338 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 NPIPA1Q9UND3 350 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 ZNF232Q9UNY5 417 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 MYO18BQ8IUG5 2567 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 TRBV5-3A0A0A0MS03 114 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 A0A0G2JMM0 328 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 A0A0G2JPF8 293 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 A0A1W2PPB8 328 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 A0A1W2PRS3 328 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 FAM166BA8MTA8 275 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 KIR3DP1A8MWS1 328 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 HNRNPCL2B2RXH8 293 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 HNRNPCL3B7ZW38 293 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 FAM47E-STBD1D6RA91 191 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 GNB5O14775 395 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 HNRNPCL1O60812 293 aaKnown RBP10.81□□□□□ -0.68
SNCA-202ENST00000345009 TRAPPC6AO75865 159 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 GLSO94925 669 aaPredicted RBP10.81□□□□□ -0.68
SNCA-202ENST00000345009 H6PDO95479 791 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 ANGPTL1O95841 491 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 TFPTP0C1Z6 253 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 HNRNPCL4P0DMR1 293 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 BMP2P12643 396 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 GDF1P27539 372 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 DCTP40126 519 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 RFC3P40938 356 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 MVDP53602 400 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 CYP51A1Q16850 503 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 ZSWIM7Q19AV6 140 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 ZNF630Q2M218 657 aaPredicted RBP10.81□□□□□ -0.68
SNCA-202ENST00000345009 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.81□□□□□ -0.68
SNCA-202ENST00000345009 KLHL26Q53HC5 615 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 AP1ARQ63HQ0 302 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 REEP3Q6NUK4 255 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 EIF3MQ7L2H7 374 aaKnown RBP10.81□□□□□ -0.68
SNCA-202ENST00000345009 MARCH3Q86UD3 253 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 KRT73Q86Y46 540 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 SLC30A8Q8IWU4 369 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 MSRB3Q8IXL7 192 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 PEX5LQ8IYB4 626 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 GHDCQ8N2G8 530 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 ZNF619Q8N2I2 560 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 POU5F2Q8N7G0 328 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 ZNF614Q8N883 585 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 DUSP19Q8WTR2 217 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 SLC38A5Q8WUX1 472 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 ZNF775Q96BV0 537 aaPredicted RBP10.81□□□□□ -0.68
SNCA-202ENST00000345009 RCN3Q96D15 328 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 GPR137Q96N19 417 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 GNRHR2Q96P88 292 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 SLX1AQ9BQ83 275 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 SAP130Q9H0E3 1048 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 EXO5Q9H790 373 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 PROK2Q9HC23 129 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 GALNT9Q9HCQ5 603 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 A4GALTQ9NPC4 353 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 SEC14L3Q9UDX4 400 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 MKLN1Q9UL63 735 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 C15orf41Q9Y2V0 281 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 L3MBTL1Q9Y468 752 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 DTNAQ9Y4J8 743 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 POLEQ07864 2286 aa10.81□□□□□ -0.68
SNCA-202ENST00000345009 PINLYPA6NC86 204 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 FCMRO60667 390 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 SERPINB7O75635 380 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 DBIP07108 87 aaKnown RBP10.8□□□□□ -0.68
SNCA-202ENST00000345009 CD1EP15812 388 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 IL7RP16871 459 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 HOXB9P17482 250 aaPredicted RBP10.8□□□□□ -0.68
SNCA-202ENST00000345009 PTGDSP41222 190 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 CASP6P55212 293 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 RBBP4Q09028 425 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 ESPL1Q14674 2120 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 GANABQ14697 944 aaKnown RBP10.8□□□□□ -0.68
SNCA-202ENST00000345009 LARS2Q15031 903 aaKnown RBP10.8□□□□□ -0.68
SNCA-202ENST00000345009 ZNF141Q15928 474 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 SYPL1Q16563 259 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 PRR30Q53SZ7 412 aaPredicted RBP10.8□□□□□ -0.68
SNCA-202ENST00000345009 FAM91A1Q658Y4 838 aa10.8□□□□□ -0.68
SNCA-202ENST00000345009 ZNF324BQ6AW86 544 aaPredicted RBP10.8□□□□□ -0.68
SNCA-202ENST00000345009 TYW3Q6IPR3 259 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms