RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 OR9Q1Q8NGQ5 310 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 OR6F1Q8NGZ6 308 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 ADAMTS15Q8TE58 950 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 ANKRD9Q96BM1 317 aaPredicted RBP11.95□□□□□ -0.5
CLK3-201ENST00000345005 WDFY2Q96P53 400 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 SLA2Q9H6Q3 261 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 ENAMQ9NRM1 1142 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 RBMX2Q9Y388 322 aaKnown RBP11.95□□□□□ -0.5
CLK3-201ENST00000345005 HCN4Q9Y3Q4 1203 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 ENPP4Q9Y6X5 453 aa11.95□□□□□ -0.5
CLK3-201ENST00000345005 CLDN4O14493 209 aa11.94□□□□□ -0.5
CLK3-201ENST00000345005 KIAA0513O60268 411 aa11.94□□□□□ -0.5
CLK3-201ENST00000345005 PLOD3O60568 738 aa11.94□□□□□ -0.5
CLK3-201ENST00000345005 SLC35E2P0CK97 266 aa11.94□□□□□ -0.5
CLK3-201ENST00000345005 RHCEP18577 417 aa11.94□□□□□ -0.5
CLK3-201ENST00000345005 TNFRSF1BP20333 461 aa11.94□□□□□ -0.5
CLK3-201ENST00000345005 NT5EP21589 574 aa11.94□□□□□ -0.5
CLK3-201ENST00000345005 GTF2E2P29084 291 aaKnown RBP11.94□□□□□ -0.5
CLK3-201ENST00000345005 CNR2P34972 360 aa11.94□□□□□ -0.5
CLK3-201ENST00000345005 XCR1P46094 333 aa11.94□□□□□ -0.5
CLK3-201ENST00000345005 NR0B2Q15466 257 aa11.94□□□□□ -0.5
CLK3-201ENST00000345005 ZFP69Q49AA0 526 aa11.94□□□□□ -0.5
CLK3-201ENST00000345005 GPAT3Q53EU6 434 aa11.94□□□□□ -0.5
CLK3-201ENST00000345005 ARMC4Q5T2S8 1044 aa11.94□□□□□ -0.5
CLK3-201ENST00000345005 MFSD12Q6NUT3 480 aa11.94□□□□□ -0.5
CLK3-201ENST00000345005 VASH1Q7L8A9 365 aaPredicted RBP11.94□□□□□ -0.5
CLK3-201ENST00000345005 PRSS42Q7Z5A4 293 aa11.94□□□□□ -0.5
CLK3-201ENST00000345005 ASCC1Q8N9N2 400 aaKnown RBP11.94□□□□□ -0.5
CLK3-201ENST00000345005 FAM83FQ8NEG4 500 aaPredicted RBP11.94□□□□□ -0.5
CLK3-201ENST00000345005 OR4C15Q8NGM1 316 aa11.94□□□□□ -0.5
CLK3-201ENST00000345005 OR4C6Q8NH72 309 aa11.94□□□□□ -0.5
CLK3-201ENST00000345005 CEP76Q8TAP6 659 aa11.94□□□□□ -0.5
CLK3-201ENST00000345005 SAP25Q8TEE9 199 aa11.94□□□□□ -0.5
CLK3-201ENST00000345005 ZNF354BQ96LW1 612 aa11.94□□□□□ -0.5
CLK3-201ENST00000345005 MGLLQ99685 303 aa11.94□□□□□ -0.5
CLK3-201ENST00000345005 PIP5K1AQ99755 562 aa11.94□□□□□ -0.5
CLK3-201ENST00000345005 CHCHD6Q9BRQ6 235 aa11.94□□□□□ -0.5
CLK3-201ENST00000345005 SPRTNQ9H040 489 aaPredicted RBP11.94□□□□□ -0.5
CLK3-201ENST00000345005 ANKRA2Q9H9E1 313 aa11.94□□□□□ -0.5
CLK3-201ENST00000345005 C11orf16Q9NQ32 467 aa11.94□□□□□ -0.5
CLK3-201ENST00000345005 AASSQ9UDR5 926 aa11.94□□□□□ -0.5
CLK3-201ENST00000345005 ZDBF2Q9HCK1 2354 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 PRAMEF25A6NGN4 478 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 H0YIG0 161 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 M0R296 226 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 CTNSO60931 367 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 TPPPO94811 219 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 CFIP05156 583 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 STSP08842 583 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 ENDOUP21128 410 aaKnown RBP11.93□□□□□ -0.5
CLK3-201ENST00000345005 TCEA1P23193 301 aaKnown RBP11.93□□□□□ -0.5
CLK3-201ENST00000345005 HOXD11P31277 338 aaPredicted RBP11.93□□□□□ -0.5
CLK3-201ENST00000345005 MRPS15P82914 257 aaKnown RBP11.93□□□□□ -0.5
CLK3-201ENST00000345005 CFHR1Q03591 330 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 SCN1BQ07699 218 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 FHL5Q5TD97 284 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 PLAG1Q6DJT9 500 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 ZCCHC12Q6PEW1 402 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 FAM111BQ6SJ93 734 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 ZNF517Q6ZMY9 492 aaPredicted RBP11.93□□□□□ -0.5
CLK3-201ENST00000345005 C16orf62Q7Z3J2 963 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 GATAD2AQ86YP4 633 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 D2HGDHQ8N465 521 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 SLC5A8Q8N695 610 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 DTWD2Q8NBA8 298 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 APOBEC4Q8WW27 367 aaKnown RBP11.93□□□□□ -0.5
CLK3-201ENST00000345005 UBE2FQ969M7 185 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 CCDC74AQ96AQ1 378 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 SLC35A4Q96G79 324 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 RHNO1Q9BSD3 238 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 OR51E2Q9H255 320 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 HCN3Q9P1Z3 774 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 N6AMT1Q9Y5N5 214 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 OR10H2O60403 315 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 OR2B3O76000 313 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 SOX30O94993 753 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 CCNB2O95067 398 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 SCG5P05408 212 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 CHRM4P08173 479 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 MYF5P13349 255 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 CHMP24386 653 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 PSMA1P25786 263 aaKnown RBP11.93□□□□□ -0.5
CLK3-201ENST00000345005 IDH2P48735 452 aaKnown RBP11.93□□□□□ -0.5
CLK3-201ENST00000345005 SPIBQ01892 262 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 RIPPLY1Q0D2K3 151 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 FUT5Q11128 374 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 BIKQ13323 160 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 SQSTM1Q13501 440 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 GPR50Q13585 617 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 PUM1Q14671 1186 aaKnown RBP eCLIP11.93□□□□□ -0.5
CLK3-201ENST00000345005 NCF4Q15080 339 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 PRICKLE4Q2TBC4 344 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 CYP27C1Q4G0S4 372 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 TRMT12Q53H54 448 aaKnown RBP11.93□□□□□ -0.5
CLK3-201ENST00000345005 FAM209AQ5JX71 171 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 SNAP47Q5SQN1 464 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 HEPHL1Q6MZM0 1159 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 FAM181AQ8N9Y4 354 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 GPR32P1Q8NGA4 272 aa11.93□□□□□ -0.5
CLK3-201ENST00000345005 MMABQ96EY8 250 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms