RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 GLB1L2Q8IW92 636 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 OR4C15Q8NGM1 316 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 GPR148Q8TDV2 347 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 ZNF587Q96SQ5 575 aaPredicted RBP17.05■□□□□ 0.32
SMC4-201ENST00000344722 PELI2Q9HAT8 420 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 TOR1AO14656 332 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 SSX4O60224 188 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 GPR32O75388 356 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 GJB5O95377 273 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 GDNFP39905 211 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 GDF6Q6KF10 455 aaPredicted RBP17.05■□□□□ 0.32
SMC4-201ENST00000344722 SLC18B1Q6NT16 456 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 TRIB2Q92519 343 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 SLC25A46Q96AG3 418 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 YIPF6Q96EC8 236 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 RADILQ96JH8 1075 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 SLC25A18Q9H1K4 315 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 DMRT3Q9NQL9 472 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 MED17Q9NVC6 651 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 SDHAF2Q9NX18 166 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 PCDHGA6Q9Y5G7 932 aa17.05■□□□□ 0.32
SMC4-201ENST00000344722 PIGBOS1A0A0B4J2F0 54 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 IFNA10P01566 189 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 IFNA4P05014 189 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 TAS2R19P59542 299 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 BAK1Q16611 211 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 ZNF805Q5CZA5 627 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 DEFB132Q7Z7B7 95 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 ASPGQ86U10 573 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 GPAT4Q86UL3 456 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 NLRP8Q86W28 1048 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 ZNF440Q8IYI8 595 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 OR4F15Q8NGB8 312 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 OR8J2Q8NGG1 315 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 ACOT11Q8WXI4 607 aaPredicted RBP17.04■□□□□ 0.32
SMC4-201ENST00000344722 MYLIPQ8WY64 445 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 GABARAPL1Q9H0R8 117 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 DNTTIP1Q9H147 329 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 TOPAZ1Q8N9V7 1692 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 BDKRB2P30411 391 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 HTR4Q13639 388 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 HMGN3Q15651 99 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 LRFN4Q6PJG9 635 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 Q6ZSR9 355 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 A0A0A6YYH2 397 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 TRDV1A0A1B0GX56 115 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 MROH6A6NGR9 719 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 A6NJ64 397 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 KHNYNO15037 678 aaKnown RBP17.04■□□□□ 0.32
SMC4-201ENST00000344722 SULT1B1O43704 296 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 TPPPO94811 219 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 ETV6P41212 452 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 SLC1A3P43003 542 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 SPINT3P49223 89 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 CTSL3PQ5NE16 218 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 LNX2Q8N448 690 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 ST8SIA4Q92187 359 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 ZMYND19Q96E35 227 aaPredicted RBP17.04■□□□□ 0.32
SMC4-201ENST00000344722 DUSP21Q9H596 190 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 CDHR4A6H8M9 788 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 C11orf98E9PRG8 122 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 RAD51DO75771 328 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 SLC16A8O95907 504 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 ARAFP10398 606 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 MBTPS1Q14703 1052 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 GGTA1PQ4G0N0 100 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 PKDCCQ504Y2 493 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 ALG10BQ5I7T1 473 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 GAREM2Q75VX8 874 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 KCNK6Q9Y257 313 aa17.04■□□□□ 0.32
SMC4-201ENST00000344722 VEGFDO43915 354 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 TRIM23P36406 574 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 RNF144AP50876 292 aaPredicted RBP17.03■□□□□ 0.32
SMC4-201ENST00000344722 ERVFC1P60507 584 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 IFNL1Q8IU54 200 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 HIF3AQ9Y2N7 669 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 TRBV4-1A0A0J9YWV2 114 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 FEZF1A0PJY2 475 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 RAB19A4D1S5 217 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 E9PI62 339 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 LEFTY1O75610 366 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 LATS1O95835 1130 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 HOXA11P31270 313 aaPredicted RBP17.03■□□□□ 0.32
SMC4-201ENST00000344722 SGSHP51688 502 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 IL13RA1P78552 427 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 LMAN2Q12907 356 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 LEXMQ3ZCV2 418 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 LRIF1Q5T3J3 769 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 LRIG1Q96JA1 1093 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 EGLN2Q96KS0 407 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 ZNF582Q96NG8 517 aaPredicted RBP17.03■□□□□ 0.32
SMC4-201ENST00000344722 MICU1Q9BPX6 476 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 IL26Q9NPH9 171 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 ATP13A2Q9NQ11 1180 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 PRODH2Q9UF12 536 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 A0A1B0GV50 99 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 KCNK5O95279 499 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 NKX3-2P78367 333 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 CCINQ13939 588 aa17.03■□□□□ 0.32
SMC4-201ENST00000344722 PDGFRLQ15198 375 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms