RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 ZER1Q7Z7L7 766 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 TMEM17Q86X19 198 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 ZPBPQ9BS86 351 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 MRPS2Q9Y399 296 aaKnown RBP15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 LRRC42Q9Y546 428 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 OR7A17O14581 309 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 TNFSF14O43557 240 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 SLC35E2P0CK97 266 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 EPHA8P29322 1005 aaPredicted RBP15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 PLK5Q496M5 336 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 OR4K5Q8NGD3 323 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 SLC46A1Q96NT5 459 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 RIMS3Q9UJD0 308 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 FARSAQ9Y285 508 aaKnown RBP15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 UNC13CQ8NB66 2214 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 NPPBP16860 134 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 ULK3Q6PHR2 472 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 RPS19BP1Q86WX3 136 aaKnown RBP15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 NRMQ8IXM6 262 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 CDH20Q9HBT6 801 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 SEC14L4Q9UDX3 406 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 SLC23A2Q9UGH3 650 aa15.37■□□□□ 0.05
SMARCA4-201ENST00000344626 DCTP40126 519 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 GPR3P46089 330 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 MLLT10P55197 1068 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 CEACAM7Q14002 265 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 E2F2Q14209 437 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 GTDC1Q4AE62 458 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 RUNDC3AQ59EK9 446 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 WBP2NLQ6ICG8 309 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 GALNTL5Q7Z4T8 443 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 WDR53Q7Z5U6 358 aaPredicted RBP15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 LYRM4Q9HD34 91 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 FBXO4Q9UKT5 387 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 IDUAP35475 653 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 ACTA2P62736 377 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 ACTG2P63267 376 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 ARSJQ5FYB0 599 aaPredicted RBP15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 TMEM64Q6YI46 380 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 OR5D16Q8NGK9 328 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 COQ3Q9NZJ6 369 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 SLC7A7Q9UM01 511 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 STMND1H3BQB6 276 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 CRABP1P29762 137 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 BCL6P41182 706 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 CAPZBP47756 277 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 OR1J4Q8NGS1 313 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 C2orf42Q9NWW7 574 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 SPEF1Q9Y4P9 236 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 MYO10Q9HD67 2058 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 WRBO00258 174 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 CSF2P04141 144 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 TEAD1P28347 426 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 RIDAP52758 137 aaKnown RBP15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 CHRNEQ04844 493 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 MELKQ14680 651 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 PAGE3Q5JUK9 113 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 PITX2Q99697 317 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 NUDT22Q9BRQ3 303 aa15.36■□□□□ 0.05
SMARCA4-201ENST00000344626 FAM240BA0A1B0GVZ2 78 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 FAM25EA8MYX2 175 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 PPP6CO00743 305 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 ATE1O95260 518 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 CYB561P49447 251 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 PFN3P60673 137 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 ALG10Q5BKT4 473 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 LINGO2Q7L985 606 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 CNN2Q99439 309 aaKnown RBP15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 TMED9Q9BVK6 235 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 OTOL1A6NHN0 477 aaPredicted RBP15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 KLRC4-KLRK1H3BQV0 150 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 RASAL1O95294 804 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 IRF2P14316 349 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 HSD17B7P56937 341 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 ABHD17CQ6PCB6 329 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 DGLUCYQ7Z3D6 616 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 PIK3R3Q92569 461 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 FAM46AQ96IP4 442 aaKnown RBP15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 GAL3ST1Q99999 423 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 OR10A5Q9H207 317 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 ARHGDIBP52566 201 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 OR52E2Q8NGJ4 325 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 NETO1Q8TDF5 533 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 GABRG3Q99928 467 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 LUZP4Q9P127 313 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 TET1Q8NFU7 2136 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 NPIPA5A0A0B4J1W7 369 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 IDSB3KWA1 339 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 EEF1E1-BLOC1S5C9J1V9 151 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 NPIPA7E9PJI5 369 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 SLC22A1O15245 554 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 EEF1E1O43324 174 aaKnown RBP15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 FZD6O60353 706 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 MRPL3P09001 348 aaKnown RBP15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 NPIPA8P0DM63 369 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 CD1CP29017 333 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 SCN1BQ07699 218 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 SEC23BQ15437 767 aa15.35■□□□□ 0.05
SMARCA4-201ENST00000344626 PERM1Q5SV97 790 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms