RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 KCNJ3P48549 501 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 LHX1P48742 406 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 SRP9P49458 86 aaKnown RBP7.63□□□□□ -1.19
ATG4A-201ENST00000343524 RNF144AP50876 292 aaPredicted RBP7.63□□□□□ -1.19
ATG4A-201ENST00000343524 CTSCP53634 463 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 AP1S1P61966 158 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 GUCA2AQ02747 115 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 GANABQ14697 944 aaKnown RBP7.63□□□□□ -1.19
ATG4A-201ENST00000343524 KLHL26Q53HC5 615 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 SFRP5Q5T4F7 317 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 CPTPQ5TA50 214 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 OR2G6Q5TZ20 316 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 FAM111BQ6SJ93 734 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 THEM5Q8N1Q8 247 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 HJURPQ8NCD3 748 aaPredicted RBP7.63□□□□□ -1.19
ATG4A-201ENST00000343524 FBXO15Q8NCQ5 510 aaPredicted RBP7.63□□□□□ -1.19
ATG4A-201ENST00000343524 OR4K2Q8NGD2 314 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 C15orf40Q8WUR7 153 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 APOLD1Q96LR9 279 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 PARK7Q99497 189 aaKnown RBP7.63□□□□□ -1.19
ATG4A-201ENST00000343524 CMSS1Q9BQ75 279 aaKnown RBP7.63□□□□□ -1.19
ATG4A-201ENST00000343524 SLC32A1Q9H598 525 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 EXOSC3Q9NQT5 275 aaKnown RBP7.63□□□□□ -1.19
ATG4A-201ENST00000343524 SLC22A11Q9NSA0 550 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 C14orf105Q9NVL8 296 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 TREM2Q9NZC2 230 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 CFAP97Q9P2B7 532 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 NPFFR2Q9Y5X5 522 aa7.63□□□□□ -1.19
ATG4A-201ENST00000343524 FXYD6-FXYD2A0A087WZ82 144 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 MTMR11A4FU01 709 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 C5orf52A6NGY3 159 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 RHPN2P1A8MT19 583 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 F5H5P2 479 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 H7C0S8 307 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 PPM1DO15297 605 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 TLR5O60602 858 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 RDH16O75452 317 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 GCM2O75603 506 aaPredicted RBP7.62□□□□□ -1.19
ATG4A-201ENST00000343524 SOX14O95416 240 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 MT-ND4P03905 459 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 CRYBA1P05813 215 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 H1F0P07305 194 aaKnown RBP7.62□□□□□ -1.19
ATG4A-201ENST00000343524 GP1BAP07359 652 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 CHRM5P08912 532 aaPredicted RBP7.62□□□□□ -1.19
ATG4A-201ENST00000343524 CD3GP09693 182 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 SFTPCP11686 197 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 HSD3B1P14060 373 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 ZNF7P17097 686 aaPredicted RBP7.62□□□□□ -1.19
ATG4A-201ENST00000343524 CELP19835 753 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 XPAP23025 273 aaPredicted RBP7.62□□□□□ -1.19
ATG4A-201ENST00000343524 ELAVL4P26378 380 aaKnown RBP7.62□□□□□ -1.19
ATG4A-201ENST00000343524 HSD3B2P26439 372 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 MPGP29372 298 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 FEN1P39748 380 aaKnown RBP7.62□□□□□ -1.19
ATG4A-201ENST00000343524 STARD6P59095 220 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 MAT1AQ00266 395 aaKnown RBP7.62□□□□□ -1.19
ATG4A-201ENST00000343524 CDK6Q00534 326 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 EIF4EBP2Q13542 120 aaPredicted RBP7.62□□□□□ -1.19
ATG4A-201ENST00000343524 PON3Q15166 354 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 KCNA10Q16322 511 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 C18orf21Q32NC0 220 aaPredicted RBP7.62□□□□□ -1.19
ATG4A-201ENST00000343524 C10orf91Q5T1B1 145 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 PTRHD1Q6GMV3 140 aaKnown RBP7.62□□□□□ -1.19
ATG4A-201ENST00000343524 OR5M10Q6IEU7 315 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 OR7E24Q6IFN5 339 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 RPL13AP3Q6NVV1 102 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 ANGPTL8Q6UXH0 198 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 BHLHA9Q7RTU4 235 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 SPATA2LQ8IUW3 424 aaPredicted RBP7.62□□□□□ -1.19
ATG4A-201ENST00000343524 CFAP206Q8IYR0 622 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 LINC01465Q8N7H1 131 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 C15orf54Q8N8G6 183 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 L3MBTL4Q8NA19 623 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 POGLUT1Q8NBL1 392 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 ZNF485Q8NCK3 441 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 ASZ1Q8WWH4 475 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 SORCS1Q8WY21 1168 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 RAB7BQ96AH8 199 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 HMCESQ96FZ2 354 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 ABHD1Q96SE0 405 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 PFDN5Q99471 154 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 SMOQ99835 787 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 ADGRE3Q9BY15 652 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 TM6SF2Q9BZW4 377 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 ZDHHC5Q9C0B5 715 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 FXYD6Q9H0Q3 95 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 P2RY12Q9H244 342 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 CHRDQ9H2X0 955 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 TMEM138Q9NPI0 162 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 ELOVL2Q9NXB9 296 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 NLGN3Q9NZ94 848 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 PPP4R1LQ9P1A2 415 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 ZNF629Q9UEG4 869 aaPredicted RBP7.62□□□□□ -1.19
ATG4A-201ENST00000343524 OPN4Q9UHM6 478 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 PLEKHM1Q9Y4G2 1056 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 PCDHB9Q9Y5E1 797 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 SCN8AQ9UQD0 1980 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 KANTRA0A1W2PQU2 76 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 OR6C68A6NDL8 312 aa7.62□□□□□ -1.19
ATG4A-201ENST00000343524 CD8B2A6NJW9 211 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms