RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 METTL25Q8N6Q8 603 aa14.13□□□□□ -0.15
UBE3B-202ENST00000342494 NETO1Q8TDF5 533 aa14.13□□□□□ -0.15
UBE3B-202ENST00000342494 NXPE3Q969Y0 559 aa14.13□□□□□ -0.15
UBE3B-202ENST00000342494 OR10A5Q9H207 317 aa14.13□□□□□ -0.15
UBE3B-202ENST00000342494 OR10A2Q9H208 303 aa14.13□□□□□ -0.15
UBE3B-202ENST00000342494 SLC6A14Q9UN76 642 aa14.13□□□□□ -0.15
UBE3B-202ENST00000342494 KIAA0513O60268 411 aa14.13□□□□□ -0.15
UBE3B-202ENST00000342494 SNAPC5O75971 98 aa14.13□□□□□ -0.15
UBE3B-202ENST00000342494 FNTBP49356 437 aa14.13□□□□□ -0.15
UBE3B-202ENST00000342494 ERVK-16P61578 105 aa14.13□□□□□ -0.15
UBE3B-202ENST00000342494 ERV3-1Q14264 604 aa14.13□□□□□ -0.15
UBE3B-202ENST00000342494 SYNPOQ8N3V7 929 aa14.13□□□□□ -0.15
UBE3B-202ENST00000342494 SLC2A12Q8TD20 617 aa14.13□□□□□ -0.15
UBE3B-202ENST00000342494 CHPT1Q8WUD6 406 aa14.13□□□□□ -0.15
UBE3B-202ENST00000342494 RSC1A1Q92681 617 aa14.13□□□□□ -0.15
UBE3B-202ENST00000342494 MRPL38Q96DV4 380 aaKnown RBP14.13□□□□□ -0.15
UBE3B-202ENST00000342494 ZMYND19Q96E35 227 aaPredicted RBP14.13□□□□□ -0.15
UBE3B-202ENST00000342494 NMNAT1Q9HAN9 279 aaPredicted RBP14.13□□□□□ -0.15
UBE3B-202ENST00000342494 CASC3O15234 703 aaKnown RBP14.12□□□□□ -0.15
UBE3B-202ENST00000342494 HIST1H1TP22492 207 aaPredicted RBP14.12□□□□□ -0.15
UBE3B-202ENST00000342494 TUBG1P23258 451 aa14.12□□□□□ -0.15
UBE3B-202ENST00000342494 OR5M10Q6IEU7 315 aa14.12□□□□□ -0.15
UBE3B-202ENST00000342494 MRPL41Q8IXM3 137 aaKnown RBP14.12□□□□□ -0.15
UBE3B-202ENST00000342494 ZNF480Q8WV37 535 aa14.12□□□□□ -0.15
UBE3B-202ENST00000342494 CRYGNQ8WXF5 182 aa14.12□□□□□ -0.15
UBE3B-202ENST00000342494 UTP23Q9BRU9 249 aaKnown RBP14.12□□□□□ -0.15
UBE3B-202ENST00000342494 LMF2Q9BU23 707 aaKnown RBP14.12□□□□□ -0.15
UBE3B-202ENST00000342494 INIPQ9NRY2 104 aa14.12□□□□□ -0.15
UBE3B-202ENST00000342494 ARMC1Q9NVT9 282 aa14.12□□□□□ -0.15
UBE3B-202ENST00000342494 F5H0A9 414 aaPredicted RBP14.12□□□□□ -0.15
UBE3B-202ENST00000342494 YKT6O15498 198 aa14.12□□□□□ -0.15
UBE3B-202ENST00000342494 TCN2P20062 427 aa14.12□□□□□ -0.15
UBE3B-202ENST00000342494 SNTB2Q13425 540 aaKnown RBP14.12□□□□□ -0.15
UBE3B-202ENST00000342494 GOLM1Q8NBJ4 401 aa14.12□□□□□ -0.15
UBE3B-202ENST00000342494 OR5L1Q8NGL2 311 aa14.12□□□□□ -0.15
UBE3B-202ENST00000342494 SIGLEC1Q9BZZ2 1709 aa14.12□□□□□ -0.15
UBE3B-202ENST00000342494 GPR83Q9NYM4 423 aa14.12□□□□□ -0.15
UBE3B-202ENST00000342494 PRSS21Q9Y6M0 314 aa14.12□□□□□ -0.15
UBE3B-202ENST00000342494 NUDT21O43809 227 aaKnown RBP14.12□□□□□ -0.15
UBE3B-202ENST00000342494 TRA2BP62995 288 aaKnown RBP14.12□□□□□ -0.15
UBE3B-202ENST00000342494 CSNK2A3Q8NEV1 391 aa14.12□□□□□ -0.15
UBE3B-202ENST00000342494 MSANTD3Q96H12 275 aa14.12□□□□□ -0.15
UBE3B-202ENST00000342494 NXF5Q9H1B4 397 aaKnown RBP14.12□□□□□ -0.15
UBE3B-202ENST00000342494 DKK3Q9UBP4 350 aa14.12□□□□□ -0.15
UBE3B-202ENST00000342494 HSPB11Q9Y547 144 aa14.12□□□□□ -0.15
UBE3B-202ENST00000342494 USP3Q9Y6I4 520 aa14.12□□□□□ -0.15
UBE3B-202ENST00000342494 SDC1P18827 310 aa14.12□□□□□ -0.15
UBE3B-202ENST00000342494 NOVP48745 357 aa14.12□□□□□ -0.15
UBE3B-202ENST00000342494 SELENOWP63302 87 aa14.12□□□□□ -0.15
UBE3B-202ENST00000342494 ZP2Q05996 745 aa14.12□□□□□ -0.15
UBE3B-202ENST00000342494 CPOQ8IVL8 374 aa14.12□□□□□ -0.15
UBE3B-202ENST00000342494 ZNF420Q8TAQ5 688 aaPredicted RBP14.12□□□□□ -0.15
UBE3B-202ENST00000342494 INSM2Q96T92 566 aaPredicted RBP14.12□□□□□ -0.15
UBE3B-202ENST00000342494 PLEKHA3Q9HB20 300 aa14.12□□□□□ -0.15
UBE3B-202ENST00000342494 RP2O75695 350 aa14.12□□□□□ -0.15
UBE3B-202ENST00000342494 GLSO94925 669 aaPredicted RBP14.12□□□□□ -0.15
UBE3B-202ENST00000342494 PENKP01210 267 aaPredicted RBP14.12□□□□□ -0.15
UBE3B-202ENST00000342494 HSD17B1P14061 328 aa14.12□□□□□ -0.15
UBE3B-202ENST00000342494 DCAF7P61962 342 aa14.12□□□□□ -0.15
UBE3B-202ENST00000342494 TXNDC15Q96J42 360 aa14.12□□□□□ -0.15
UBE3B-202ENST00000342494 HHIPL1Q96JK4 782 aa14.12□□□□□ -0.15
UBE3B-202ENST00000342494 PRSS16Q9NQE7 514 aa14.12□□□□□ -0.15
UBE3B-202ENST00000342494 B8ZZF3 427 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 GFRA2O00451 464 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 RAD1O60671 282 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 GALR3O60755 368 aaPredicted RBP14.11□□□□□ -0.15
UBE3B-202ENST00000342494 DNAJB5O75953 348 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 GPR75O95800 540 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 SERPINA5P05154 406 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 CHRM4P08173 479 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 PTGER1P34995 402 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 TMBIM6P55061 237 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 ACTBP60709 375 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 ACTG1P63261 375 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 ZNF784Q8NCA9 323 aaPredicted RBP14.11□□□□□ -0.15
UBE3B-202ENST00000342494 GLYATL2Q8WU03 294 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 ACOT13Q9NPJ3 140 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 HSPE1-MOB4S4R3N1 261 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 KAT6AQ92794 2004 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 LINC01553A4QN01 128 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 M0R233 179 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 MPIG6BO95866 241 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 MICAQ29983 383 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 OR6C1Q96RD1 312 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 UBQLN4Q9NRR5 601 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 KLHL42Q9P2K6 505 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 POLHQ9Y253 713 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 H0YGG7 62 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 MRPL33O75394 65 aaKnown RBP14.11□□□□□ -0.15
UBE3B-202ENST00000342494 CPMP14384 443 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 SLC14A2Q15849 920 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 RAB41Q5JT25 222 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 LCN8Q6JVE9 175 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 MMP21Q8N119 569 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 C19orf47Q8N9M1 422 aaKnown RBP14.11□□□□□ -0.15
UBE3B-202ENST00000342494 OR51Q1Q8NH59 317 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 PHOX2BQ99453 314 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 TWSG1Q9GZX9 223 aa14.11□□□□□ -0.15
UBE3B-202ENST00000342494 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.11□□□□□ -0.15
UBE3B-202ENST00000342494 G3V2L1 256 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms