RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 NXNL2Q5VZ03 156 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 TIGD3Q6B0B8 471 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 TBC1D3GQ6DHY5 549 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 TBC1D3CQ6IPX1 549 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 ZNF425Q6IV72 752 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 RPL13AP3Q6NVV1 102 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 ZNF730Q6ZMV8 503 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 ZNF793Q6ZN11 406 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 GATAD2AQ86YP4 633 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 PEX5LQ8IYB4 626 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 TBC1D3Q8IZP1 549 aaPredicted RBP10.06□□□□□ -0.8
RTN3-201ENST00000338850 NLGN4XQ8N0W4 816 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 PSD4Q8NDX1 1056 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 SIMC1Q8NDZ2 872 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 OR6T1Q8NGN1 323 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 PIGXQ8TBF5 258 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 GPR151Q8TDV0 419 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 ASB12Q8WXK4 309 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 ACOT12Q8WYK0 555 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 RAB8BQ92930 207 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 LRR1Q96L50 414 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 BBS4Q96RK4 519 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 CNPPD1Q9BV87 410 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 AICDAQ9GZX7 198 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 CCDC86Q9H6F5 360 aaKnown RBP10.06□□□□□ -0.8
RTN3-201ENST00000338850 KIR3DX1Q9H7L2 352 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 NEK6Q9HC98 313 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 EXOSC4Q9NPD3 245 aaKnown RBP10.06□□□□□ -0.8
RTN3-201ENST00000338850 PRDM7Q9NQW5 492 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 INPP5EQ9NRR6 644 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 SACM1LQ9NTJ5 587 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 KLHL28Q9NXS3 571 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 IL20Q9NYY1 176 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 PLEKHB1Q9UF11 243 aaPredicted RBP10.06□□□□□ -0.8
RTN3-201ENST00000338850 SLC23A2Q9UGH3 650 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 CLEC2DQ9UHP7 191 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 ADAM30Q9UKF2 790 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 SNX7Q9UNH6 387 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 SLC17A4Q9Y2C5 497 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 PCDHGB7Q9Y5F8 929 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 TMEM131Q92545 1883 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 IGKV1-8A0A0C4DH67 115 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 ANKRD61A6NGH8 418 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 CENPBD1B2RD01 187 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 FAM47E-STBD1D6RA91 191 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 H7BY64 318 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 M0R3H8 397 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 POLR1CO15160 346 aaPredicted RBP10.05□□□□□ -0.8
RTN3-201ENST00000338850 TLX2O43763 284 aaPredicted RBP10.05□□□□□ -0.8
RTN3-201ENST00000338850 FMO6PO60774 539 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 CYP7B1O75881 506 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 CCNKO75909 580 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 SOX30O94993 753 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 SOX14O95416 240 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 TSPAN19P0C672 248 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 MSL3P1P0C860 447 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 ATP5A1P25705 553 aaKnown RBP10.05□□□□□ -0.8
RTN3-201ENST00000338850 HLA-DMAP28067 261 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 NDUFS1P28331 727 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 EPHA8P29322 1005 aaPredicted RBP10.05□□□□□ -0.8
RTN3-201ENST00000338850 SOX3P41225 446 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 OMPP47874 163 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 MTNR1AP48039 350 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 RFX2P48378 723 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 STXBP1P61764 594 aaKnown RBP10.05□□□□□ -0.8
RTN3-201ENST00000338850 PIN1Q13526 163 aaPredicted RBP10.05□□□□□ -0.8
RTN3-201ENST00000338850 TRAM1Q15629 374 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 WSCD2Q2TBF2 565 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 POM121L1PQ3SYA9 428 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 CYP27C1Q4G0S4 372 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 EIPR1Q53HC9 387 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 AADACL4Q5VUY2 407 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 ACSM5Q6NUN0 579 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 IQCHQ86VS3 1027 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 KIF18BQ86Y91 864 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 NRROSQ86YC3 692 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 MARCH9Q86YJ5 346 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 GID4Q8IVV7 300 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 VWA5B2Q8N398 1253 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 VANGL1Q8TAA9 524 aaPredicted RBP10.05□□□□□ -0.8
RTN3-201ENST00000338850 NT5CQ8TCD5 201 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 SAP25Q8TEE9 199 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 GAL3ST3Q96A11 431 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 KCTD12Q96CX2 325 aaKnown RBP10.05□□□□□ -0.8
RTN3-201ENST00000338850 OTUB1Q96FW1 271 aaPredicted RBP10.05□□□□□ -0.8
RTN3-201ENST00000338850 TRMT61AQ96FX7 289 aaKnown RBP10.05□□□□□ -0.8
RTN3-201ENST00000338850 ZNF681Q96N22 645 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 PRAP1Q96NZ9 151 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 DEPDC7Q96QD5 511 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 UBL7Q96S82 380 aaPredicted RBP10.05□□□□□ -0.8
RTN3-201ENST00000338850 ACTRT3Q9BYD9 372 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.05□□□□□ -0.83e-6■□□□□ 8.9
RTN3-201ENST00000338850 ABCG4Q9H172 646 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 SLC38A1Q9H2H9 487 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 MIXL1Q9H2W2 232 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 WDR26Q9H7D7 661 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 MRPS30Q9NP92 439 aaKnown RBP10.05□□□□□ -0.8
RTN3-201ENST00000338850 TVP23BQ9NYZ1 205 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 CBLCQ9ULV8 474 aa10.05□□□□□ -0.8
RTN3-201ENST00000338850 PLAGL1Q9UM63 463 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms