RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 NAXEQ8NCW5 288 aa13.83□□□□□ -0.2
PRKN-201ENST00000338468 OR5D16Q8NGK9 328 aa13.83□□□□□ -0.2
PRKN-201ENST00000338468 OR4A15Q8NGL6 344 aa13.83□□□□□ -0.2
PRKN-201ENST00000338468 ACTRT2Q8TDY3 377 aa13.83□□□□□ -0.2
PRKN-201ENST00000338468 C7orf26Q96N11 449 aa13.83□□□□□ -0.2
PRKN-201ENST00000338468 OR7D2Q96RA2 312 aa13.83□□□□□ -0.2
PRKN-201ENST00000338468 KLHDC3Q9BQ90 382 aa13.83□□□□□ -0.2
PRKN-201ENST00000338468 G6PC3Q9BUM1 346 aa13.83□□□□□ -0.2
PRKN-201ENST00000338468 TBL1XR1Q9BZK7 514 aa13.83□□□□□ -0.2
PRKN-201ENST00000338468 SLCO1B3Q9NPD5 702 aa13.83□□□□□ -0.2
PRKN-201ENST00000338468 SDHAF3Q9NRP4 125 aa13.83□□□□□ -0.2
PRKN-201ENST00000338468 ARGLU1Q9NWB6 273 aaPredicted RBP13.83□□□□□ -0.2
PRKN-201ENST00000338468 RPH3AQ9Y2J0 694 aaPredicted RBP13.83□□□□□ -0.2
PRKN-201ENST00000338468 NKX2-6A6NCS4 301 aa13.82□□□□□ -0.2
PRKN-201ENST00000338468 FAM90A27PA6NNH2 459 aa13.82□□□□□ -0.2
PRKN-201ENST00000338468 HMGB1P1B2RPK0 211 aaPredicted RBP13.82□□□□□ -0.2
PRKN-201ENST00000338468 LCN1P31025 176 aa13.82□□□□□ -0.2
PRKN-201ENST00000338468 CEACAM8P31997 349 aaPredicted RBP13.82□□□□□ -0.2
PRKN-201ENST00000338468 ZFP36L2P47974 494 aaKnown RBP13.82□□□□□ -0.2
PRKN-201ENST00000338468 STARP49675 285 aa13.82□□□□□ -0.2
PRKN-201ENST00000338468 CLDN18P56856 261 aa13.82□□□□□ -0.2
PRKN-201ENST00000338468 CD226Q15762 336 aa13.82□□□□□ -0.2
PRKN-201ENST00000338468 DPY19L1Q2PZI1 675 aa13.82□□□□□ -0.2
PRKN-201ENST00000338468 KRTAP21-3Q3LHN1 58 aa13.82□□□□□ -0.2
PRKN-201ENST00000338468 ANXA8L1Q5VT79 327 aa13.82□□□□□ -0.2
PRKN-201ENST00000338468 C6orf120Q7Z4R8 191 aa13.82□□□□□ -0.2
PRKN-201ENST00000338468 TNIP2Q8NFZ5 429 aa13.82□□□□□ -0.2
PRKN-201ENST00000338468 OR10Q1Q8NGQ4 319 aa13.82□□□□□ -0.2
PRKN-201ENST00000338468 ADAMTS15Q8TE58 950 aa13.82□□□□□ -0.2
PRKN-201ENST00000338468 C1GALT1C1Q96EU7 318 aa13.82□□□□□ -0.2
PRKN-201ENST00000338468 MARK4Q96L34 752 aa13.82□□□□□ -0.2
PRKN-201ENST00000338468 SFXN2Q96NB2 322 aa13.82□□□□□ -0.2
PRKN-201ENST00000338468 TUBA1CQ9BQE3 449 aa13.82□□□□□ -0.2
PRKN-201ENST00000338468 TRIM8Q9BZR9 551 aa13.82□□□□□ -0.2
PRKN-201ENST00000338468 NPDC1Q9NQX5 325 aaPredicted RBP13.82□□□□□ -0.2
PRKN-201ENST00000338468 UBQLN4Q9NRR5 601 aa13.82□□□□□ -0.2
PRKN-201ENST00000338468 DKKL1Q9UK85 242 aa13.82□□□□□ -0.2
PRKN-201ENST00000338468 FAF1Q9UNN5 650 aaPredicted RBP13.82□□□□□ -0.2
PRKN-201ENST00000338468 USH1CQ9Y6N9 552 aa13.82□□□□□ -0.2
PRKN-201ENST00000338468 NPIPA5A0A0B4J1W7 369 aa13.81□□□□□ -0.2
PRKN-201ENST00000338468 RNF103-CHMP3A0A140T963 221 aa13.81□□□□□ -0.2
PRKN-201ENST00000338468 NPIPA7E9PJI5 369 aa13.81□□□□□ -0.2
PRKN-201ENST00000338468 NPIPB9F8W1W9 429 aa13.81□□□□□ -0.2
PRKN-201ENST00000338468 CPSF4O95639 269 aaKnown RBP13.81□□□□□ -0.2
PRKN-201ENST00000338468 KRT16P08779 473 aa13.81□□□□□ -0.2
PRKN-201ENST00000338468 NPIPA8P0DM63 369 aa13.81□□□□□ -0.2
PRKN-201ENST00000338468 MATN1P21941 496 aa13.81□□□□□ -0.2
PRKN-201ENST00000338468 CHMP24386 653 aa13.81□□□□□ -0.2
PRKN-201ENST00000338468 S100A3P33764 101 aa13.81□□□□□ -0.2
PRKN-201ENST00000338468 CLK3P49761 638 aaKnown RBP13.81□□□□□ -0.2
PRKN-201ENST00000338468 C17orf67Q0P5P2 114 aa13.81□□□□□ -0.2
PRKN-201ENST00000338468 TMEM44Q2T9K0 475 aa13.81□□□□□ -0.2
PRKN-201ENST00000338468 DCST2Q5T1A1 773 aa13.81□□□□□ -0.2
PRKN-201ENST00000338468 NSUN5P2Q63ZY6 315 aa13.81□□□□□ -0.2
PRKN-201ENST00000338468 SAXO2Q658L1 398 aa13.81□□□□□ -0.2
PRKN-201ENST00000338468 NXNQ6DKJ4 435 aa13.81□□□□□ -0.2
PRKN-201ENST00000338468 POMZP3Q6PJE2 187 aa13.81□□□□□ -0.2
PRKN-201ENST00000338468 EPGNQ6UW88 154 aa13.81□□□□□ -0.2
PRKN-201ENST00000338468 ADGRE4PQ86SQ3 457 aa13.81□□□□□ -0.2
PRKN-201ENST00000338468 LACC1Q8IV20 430 aa13.81□□□□□ -0.2
PRKN-201ENST00000338468 GATSQ8NAP1 163 aa13.81□□□□□ -0.2
PRKN-201ENST00000338468 OR5M1Q8NGP8 315 aa13.81□□□□□ -0.2
PRKN-201ENST00000338468 GOT1L1Q8NHS2 421 aaPredicted RBP13.81□□□□□ -0.2
PRKN-201ENST00000338468 ZPLD1Q8TCW7 415 aa13.81□□□□□ -0.2
PRKN-201ENST00000338468 MIPOL1Q8TD10 442 aa13.81□□□□□ -0.2
PRKN-201ENST00000338468 CHMP6Q96FZ7 201 aa13.81□□□□□ -0.2
PRKN-201ENST00000338468 CCDC115Q96NT0 180 aa13.81□□□□□ -0.2
PRKN-201ENST00000338468 TREX2Q9BQ50 279 aaPredicted RBP13.81□□□□□ -0.2
PRKN-201ENST00000338468 ENKD1Q9H0I2 346 aa13.81□□□□□ -0.2
PRKN-201ENST00000338468 HCFC1P51610 2035 aa13.81□□□□□ -0.2
PRKN-201ENST00000338468 A0A1W2PQD3 144 aa13.8□□□□□ -0.2
PRKN-201ENST00000338468 CD8B2A6NJW9 211 aa13.8□□□□□ -0.2
PRKN-201ENST00000338468 NDUFB5O43674 189 aa13.8□□□□□ -0.2
PRKN-201ENST00000338468 GMFGO60234 142 aa13.8□□□□□ -0.2
PRKN-201ENST00000338468 PGRP06401 933 aa13.8□□□□□ -0.2
PRKN-201ENST00000338468 ZNF708P17019 499 aa13.8□□□□□ -0.2
PRKN-201ENST00000338468 HK1P19367 917 aa13.8□□□□□ -0.2
PRKN-201ENST00000338468 UQCRC2P22695 453 aa13.8□□□□□ -0.2
PRKN-201ENST00000338468 SSTR2P30874 369 aa13.8□□□□□ -0.2
PRKN-201ENST00000338468 TIMP3P35625 211 aa13.8□□□□□ -0.2
PRKN-201ENST00000338468 CASP9P55211 416 aa13.8□□□□□ -0.2
PRKN-201ENST00000338468 CLDN15P56746 228 aa13.8□□□□□ -0.2
PRKN-201ENST00000338468 PPP2R2AP63151 447 aa13.8□□□□□ -0.2
PRKN-201ENST00000338468 SRYQ05066 204 aa13.8□□□□□ -0.2
PRKN-201ENST00000338468 GANABQ14697 944 aaKnown RBP13.8□□□□□ -0.2
PRKN-201ENST00000338468 PDCD4Q53EL6 469 aaKnown RBP13.8□□□□□ -0.2
PRKN-201ENST00000338468 KLHL26Q53HC5 615 aa13.8□□□□□ -0.2
PRKN-201ENST00000338468 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.8□□□□□ -0.2
PRKN-201ENST00000338468 AAGABQ6PD74 315 aa13.8□□□□□ -0.2
PRKN-201ENST00000338468 BHLHB9Q6PI77 547 aa13.8□□□□□ -0.2
PRKN-201ENST00000338468 ENPP6Q6UWR7 440 aa13.8□□□□□ -0.2
PRKN-201ENST00000338468 ARSKQ6UWY0 536 aa13.8□□□□□ -0.2
PRKN-201ENST00000338468 PLXDC2Q6UX71 529 aa13.8□□□□□ -0.2
PRKN-201ENST00000338468 OLIG3Q7RTU3 272 aa13.8□□□□□ -0.2
PRKN-201ENST00000338468 CHDHQ8NE62 594 aaPredicted RBP13.8□□□□□ -0.2
PRKN-201ENST00000338468 LRRC8CQ8TDW0 803 aa13.8□□□□□ -0.2
PRKN-201ENST00000338468 SLC35G5Q96KT7 338 aa13.8□□□□□ -0.2
PRKN-201ENST00000338468 TRIB1Q96RU8 372 aa13.8□□□□□ -0.2
PRKN-201ENST00000338468 SDF2Q99470 211 aa13.8□□□□□ -0.2
PRKN-201ENST00000338468 NPAS1Q99742 590 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms