RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 ALPPP05187 535 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 ASAH2BP0C7U1 165 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 SP9P0CG40 484 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 MMP11P24347 488 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 MST1P26927 711 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 CALRP27797 417 aaKnown RBP4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 GSTT1P30711 240 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 CHI3L1P36222 383 aaPredicted RBP4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 SLC25A1P53007 311 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 SNTA1Q13424 505 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 EBPQ15125 230 aaKnown RBP4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 MINDY4Q4G0A6 757 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 CRTC2Q53ET0 693 aaPredicted RBP4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 TMEM107Q6UX40 140 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 FAM122BQ7Z309 247 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 VWA5B2Q8N398 1253 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 OR1N1Q8NGS0 311 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 TMEM163Q8TC26 289 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 SKA2Q8WVK7 121 aaPredicted RBP4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 GIMAP1Q8WWP7 306 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 ISOC1Q96CN7 298 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 ALPK1Q96QP1 1244 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 FEVQ99581 238 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 SLC7A5P2Q9GIP4 190 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 SEMA4GQ9NTN9 838 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 CDC14AQ9UNH5 594 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 MAGED1Q9Y5V3 778 aaPredicted RBP4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 SPACA6W5XKT8 324 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 A0A087WUJ7 227 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 A0A1W2PNV4 684 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 FAM149AA5PLN7 773 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 EFCAB10A6NFE3 127 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 ZNF860A6NHJ4 632 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 SAC3D1A6NKF1 404 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 PDZK1P1A8MUH7 402 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 H3BMQ9 156 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 GADD45GO95257 159 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 ALOX5P09917 674 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 FGF9P31371 208 aaPredicted RBP4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 ATP12AP54707 1039 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 EIF3IQ13347 325 aaKnown RBP4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 DOC2BQ14184 412 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 PTGES3Q15185 160 aaKnown RBP4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 FDX2Q6P4F2 183 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 PODNL1Q6PEZ8 512 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 WDR88Q6ZMY6 472 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 TRIM73Q86UV7 250 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 SFTPA2Q8IWL1 248 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 NANOGP1Q8N7R0 232 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 ARIH2OSQ8N7S6 290 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 APCDD1LQ8NCL9 501 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 ZNF555Q8NEP9 628 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 OR10G6Q8NH81 332 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 DYNC2LI1Q8TCX1 351 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 HAVCR2Q8TDQ0 301 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 LCORQ96JN0 433 aaPredicted RBP4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 HSPA12BQ96MM6 686 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 MAP3K3Q99759 626 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 COQ7Q99807 217 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 CUTCQ9NTM9 273 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 FLRT3Q9NZU0 649 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 CHRNA9Q9UGM1 479 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 NXT1Q9UKK6 140 aaKnown RBP4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 CDH10Q9Y6N8 788 aa4.95□□□□□ -1.62
PRPF4B-201ENST00000337659 LAMA2P24043 3122 aaKnown RBP4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 TRAPPC13A5PLN9 417 aa4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 CYP7B1O75881 506 aa4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 CER1O95813 267 aa4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 CPEP16870 476 aa4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 AVPR1BP47901 424 aa4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 GTF2A1P52655 376 aaPredicted RBP4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 RPL6Q02878 288 aaKnown RBP4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 ACY1Q03154 408 aa4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 EMX1Q04741 257 aaPredicted RBP4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 CHRNEQ04844 493 aa4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 ST3GAL3Q11203 375 aa4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 RAB40BQ12829 278 aa4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 PMS2P3Q13401 168 aa4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 MAPK14Q16539 360 aa4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 FLYWCH1Q4VC44 716 aa4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 OVCH1Q7RTY7 1134 aa4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 LSM14AQ8ND56 463 aaKnown RBP4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 OR8J1Q8NGP2 316 aa4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 OR52N1Q8NH53 320 aa4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 GGHQ92820 318 aa4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 CXorf56Q9H5V9 222 aa4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 ZCCHC3Q9NUD5 404 aaKnown RBP4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 NDUFB11Q9NX14 153 aa4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 RSL24D1Q9UHA3 163 aaKnown RBP4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 SLC9A8Q9Y2E8 581 aa4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 PRKRAO75569 313 aaKnown RBP4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 CPSF4O95639 269 aaKnown RBP4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 NTRK1P04629 796 aa4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 PTGS2P35354 604 aa4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 SLC6A8P48029 635 aa4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 PLIN5Q00G26 463 aa4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 E2F1Q01094 437 aa4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 LTB4RQ15722 352 aa4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 SLC35D3Q5M8T2 416 aa4.94□□□□□ -1.62
PRPF4B-201ENST00000337659 ANKRD34AQ69YU3 496 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms