RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 NT5DC2Q9H857 520 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 TMEM74BQ9NUR3 256 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 DZANK1Q9NVP4 752 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 EXTL2Q9UBQ6 330 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 GPSM3Q9Y4H4 160 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 C12orf71A8MTZ7 269 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 E9PI62 339 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 EMC8O43402 210 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 AKAP8O43823 692 aaKnown RBP11.49□□□□□ -0.57
VPS33B-201ENST00000333371 HLA-DPB1P04440 258 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 MRPL3P09001 348 aaKnown RBP11.49□□□□□ -0.57
VPS33B-201ENST00000333371 ZGLP1P0C6A0 271 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 SHC1P29353 583 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 PBX2P40425 430 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 INPP1P49441 399 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 BTN3A2P78410 334 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 ID2Q02363 134 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 DSG2Q14126 1118 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 IRF4Q15306 451 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 RNASE12Q5GAN4 147 aaKnown RBP11.49□□□□□ -0.57
VPS33B-201ENST00000333371 TMEM64Q6YI46 380 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 GHDCQ8N2G8 530 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 OR7G2Q8NG99 324 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 ACOT11Q8WXI4 607 aaPredicted RBP11.49□□□□□ -0.57
VPS33B-201ENST00000333371 RAB7BQ96AH8 199 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 KIAA1143Q96AT1 154 aaPredicted RBP11.49□□□□□ -0.57
VPS33B-201ENST00000333371 TIMP4Q99727 224 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 ATP13A2Q9NQ11 1180 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 IL20Q9NYY1 176 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 PTGFRNQ9P2B2 879 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 TNFRSF10DQ9UBN6 386 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 CLEC4AQ9UMR7 237 aa11.49□□□□□ -0.57
VPS33B-201ENST00000333371 GON4LQ3T8J9 2241 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 NOTOA8MTQ0 251 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 CENPBD1B2RD01 187 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 HCN1O60741 890 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 HLA-DQB1P01920 261 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 PRKAR1AP10644 381 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 ARSBP15848 533 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 FCARP24071 287 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 HLA-DMAP28067 261 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 FXYD6P3P58550 94 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 TRA2BP62995 288 aaKnown RBP11.48□□□□□ -0.57
VPS33B-201ENST00000333371 PRR5P85299 388 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 BTBD16Q32M84 506 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 KLHL12Q53G59 568 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 WDR88Q6ZMY6 472 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 DNAJC5GQ8N7S2 189 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 OR56A1Q8NGH5 318 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 PFN4Q8NHR9 129 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 DNAJA4Q8WW22 397 aaPredicted RBP11.48□□□□□ -0.57
VPS33B-201ENST00000333371 ZNF764Q96H86 408 aaPredicted RBP11.48□□□□□ -0.57
VPS33B-201ENST00000333371 RIPOR3Q96MK2 946 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 ZNF681Q96N22 645 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 CITED4Q96RK1 184 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 HDAC8Q9BY41 377 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 HDHD2Q9H0R4 259 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 WDR26Q9H7D7 661 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 ISYNA1Q9NPH2 558 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 C20orf141Q9NUB4 165 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 THAP10Q9P2Z0 257 aaPredicted RBP11.48□□□□□ -0.57
VPS33B-201ENST00000333371 CEP290O15078 2479 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 ALX3O95076 343 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 ASGR2P07307 311 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 HSD17B2P37059 387 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 IFNGR2P38484 337 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 GZMKP49863 264 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 GPR68Q15743 365 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 FRRS1Q6ZNA5 592 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 NUDT18Q6ZVK8 323 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 TRILQ7L0X0 811 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 CXXC5Q7LFL8 322 aaKnown RBP11.48□□□□□ -0.57
VPS33B-201ENST00000333371 TMEFF1Q8IYR6 380 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 OR2L5Q8NG80 312 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 OR4M1Q8NGD0 313 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 SNAPC3Q92966 411 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 IRF2BPLQ9H1B7 796 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 UBQLN3Q9H347 655 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 SLA2Q9H6Q3 261 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 TRPV4Q9HBA0 871 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 FBXO34Q9NWN3 711 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 DOCK8Q8NF50 2099 aa11.48□□□□□ -0.57
VPS33B-201ENST00000333371 TRBV23OR9-2A0A075B6M9 112 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 A0A1W2PP55 124 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 PROM1O43490 865 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 ZNF780AO75290 641 aaPredicted RBP11.47□□□□□ -0.57
VPS33B-201ENST00000333371 IGHA1P01876 353 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 APODP05090 189 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 EIF4EP06730 217 aaKnown RBP11.47□□□□□ -0.57
VPS33B-201ENST00000333371 CLUP10909 449 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 FPR3P25089 353 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 MPIP34949 423 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 SRP9P49458 86 aaKnown RBP11.47□□□□□ -0.57
VPS33B-201ENST00000333371 SLC16A1P53985 500 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 CLDN20P56880 219 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 SHHQ15465 462 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 AGBL4Q5VU57 503 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 MZT2BQ6NZ67 158 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 BHLHB9Q6PI77 547 aa11.47□□□□□ -0.57
VPS33B-201ENST00000333371 RPTNQ6XPR3 784 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms