RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 SLC7A2P52569 658 aa14.65□□□□□ -0.06
LRRC28-202ENST00000331450 PSME3P61289 254 aa14.65□□□□□ -0.06
LRRC28-202ENST00000331450 CDK6Q00534 326 aa14.65□□□□□ -0.06
LRRC28-202ENST00000331450 SCARB2Q14108 478 aa14.65□□□□□ -0.06
LRRC28-202ENST00000331450 CD226Q15762 336 aa14.65□□□□□ -0.06
LRRC28-202ENST00000331450 MAPK14Q16539 360 aa14.65□□□□□ -0.06
LRRC28-202ENST00000331450 RNFT1Q5M7Z0 435 aa14.65□□□□□ -0.06
LRRC28-202ENST00000331450 PDZK1Q5T2W1 519 aa14.65□□□□□ -0.06
LRRC28-202ENST00000331450 ZNF324BQ6AW86 544 aaPredicted RBP14.65□□□□□ -0.06
LRRC28-202ENST00000331450 C6orf89Q6UWU4 347 aa14.65□□□□□ -0.06
LRRC28-202ENST00000331450 MARCH3Q86UD3 253 aa14.65□□□□□ -0.06
LRRC28-202ENST00000331450 PACS2Q86VP3 889 aa14.65□□□□□ -0.06
LRRC28-202ENST00000331450 PGAM4Q8N0Y7 254 aa14.65□□□□□ -0.06
LRRC28-202ENST00000331450 ZNF843Q8N446 348 aa14.65□□□□□ -0.06
LRRC28-202ENST00000331450 WDSUB1Q8N9V3 476 aa14.65□□□□□ -0.06
LRRC28-202ENST00000331450 ZNF527Q8NB42 609 aa14.65□□□□□ -0.06
LRRC28-202ENST00000331450 C11orf65Q8NCR3 313 aa14.65□□□□□ -0.06
LRRC28-202ENST00000331450 NFKBIDQ8NI38 313 aa14.65□□□□□ -0.06
LRRC28-202ENST00000331450 BBS10Q8TAM1 723 aa14.65□□□□□ -0.06
LRRC28-202ENST00000331450 ZG16BQ96DA0 208 aa14.65□□□□□ -0.06
LRRC28-202ENST00000331450 QRSL1Q9H0R6 528 aaKnown RBP14.65□□□□□ -0.06
LRRC28-202ENST00000331450 ZNF703Q9H7S9 590 aaPredicted RBP14.65□□□□□ -0.06
LRRC28-202ENST00000331450 ZFP64Q9NPA5 681 aa14.65□□□□□ -0.06
LRRC28-202ENST00000331450 RALYQ9UKM9 306 aaKnown RBP14.65□□□□□ -0.06
LRRC28-202ENST00000331450 BOKQ9UMX3 212 aaPredicted RBP14.65□□□□□ -0.06
LRRC28-202ENST00000331450 DTNAQ9Y4J8 743 aa14.65□□□□□ -0.06
LRRC28-202ENST00000331450 COL6A6A6NMZ7 2263 aa14.65□□□□□ -0.06
LRRC28-202ENST00000331450 SHANK1Q9Y566 2161 aa14.64□□□□□ -0.07
LRRC28-202ENST00000331450 A0A0G2JPF8 293 aa14.64□□□□□ -0.07
LRRC28-202ENST00000331450 C2orf72A6NCS6 295 aa14.64□□□□□ -0.07
LRRC28-202ENST00000331450 TMEM247A6NEH6 219 aa14.64□□□□□ -0.07
LRRC28-202ENST00000331450 FAM220BPB1ANY3 271 aa14.64□□□□□ -0.07
LRRC28-202ENST00000331450 HNRNPCL2B2RXH8 293 aa14.64□□□□□ -0.07
LRRC28-202ENST00000331450 HNRNPCL3B7ZW38 293 aa14.64□□□□□ -0.07
LRRC28-202ENST00000331450 SUV39H1O43463 412 aa14.64□□□□□ -0.07
LRRC28-202ENST00000331450 HNRNPCL1O60812 293 aaKnown RBP14.64□□□□□ -0.07
LRRC28-202ENST00000331450 PGM3O95394 542 aa14.64□□□□□ -0.07
LRRC28-202ENST00000331450 HNRNPCL4P0DMR1 293 aa14.64□□□□□ -0.07
LRRC28-202ENST00000331450 ELAVL4P26378 380 aaKnown RBP14.64□□□□□ -0.07
LRRC28-202ENST00000331450 PCGF2P35227 344 aa14.64□□□□□ -0.07
LRRC28-202ENST00000331450 ADH7P40394 386 aa14.64□□□□□ -0.07
LRRC28-202ENST00000331450 RFC3P40938 356 aa14.64□□□□□ -0.07
LRRC28-202ENST00000331450 CLK3P49761 638 aaKnown RBP14.64□□□□□ -0.07
LRRC28-202ENST00000331450 PCBP3P57721 371 aaKnown RBP14.64□□□□□ -0.07
LRRC28-202ENST00000331450 PLAURQ03405 335 aa14.64□□□□□ -0.07
LRRC28-202ENST00000331450 FGFBP1Q14512 234 aa14.64□□□□□ -0.07
LRRC28-202ENST00000331450 VMACQ2NL98 169 aa14.64□□□□□ -0.07
LRRC28-202ENST00000331450 TIGD3Q6B0B8 471 aa14.64□□□□□ -0.07
LRRC28-202ENST00000331450 REEP3Q6NUK4 255 aa14.64□□□□□ -0.07
LRRC28-202ENST00000331450 FAM180AQ6UWF9 173 aa14.64□□□□□ -0.07
LRRC28-202ENST00000331450 FADS6Q8N9I5 356 aa14.64□□□□□ -0.07
LRRC28-202ENST00000331450 HIPK4Q8NE63 616 aa14.64□□□□□ -0.07
LRRC28-202ENST00000331450 SNRNP40Q96DI7 357 aaKnown RBP14.64□□□□□ -0.07
LRRC28-202ENST00000331450 REXO5Q96IC2 774 aaKnown RBP14.64□□□□□ -0.07
LRRC28-202ENST00000331450 ECSITQ9BQ95 431 aa14.64□□□□□ -0.07
LRRC28-202ENST00000331450 UBQLN3Q9H347 655 aa14.64□□□□□ -0.07
LRRC28-202ENST00000331450 MTHFD2LQ9H903 347 aaPredicted RBP14.64□□□□□ -0.07
LRRC28-202ENST00000331450 SPAG4Q9NPE6 437 aa14.64□□□□□ -0.07
LRRC28-202ENST00000331450 TMEM181Q9P2C4 612 aa14.64□□□□□ -0.07
LRRC28-202ENST00000331450 USP22Q9UPT9 525 aa14.64□□□□□ -0.07
LRRC28-202ENST00000331450 AP3M1Q9Y2T2 418 aa14.64□□□□□ -0.07
LRRC28-202ENST00000331450 C15orf41Q9Y2V0 281 aa14.64□□□□□ -0.07
LRRC28-202ENST00000331450 L3MBTL1Q9Y468 752 aa14.64□□□□□ -0.07
LRRC28-202ENST00000331450 KALRNO60229 2985 aa14.63□□□□□ -0.07
LRRC28-202ENST00000331450 SERINC4A6NH21 518 aa14.63□□□□□ -0.07
LRRC28-202ENST00000331450 GNB5O14775 395 aa14.63□□□□□ -0.07
LRRC28-202ENST00000331450 NDUFB5O43674 189 aa14.63□□□□□ -0.07
LRRC28-202ENST00000331450 GCM2O75603 506 aaPredicted RBP14.63□□□□□ -0.07
LRRC28-202ENST00000331450 CRYABP02511 175 aaKnown RBP14.63□□□□□ -0.07
LRRC28-202ENST00000331450 RFPL3SP0C7P2 107 aa14.63□□□□□ -0.07
LRRC28-202ENST00000331450 ETS2P15036 469 aa14.63□□□□□ -0.07
LRRC28-202ENST00000331450 HPGDP15428 266 aa14.63□□□□□ -0.07
LRRC28-202ENST00000331450 ZNF24P17028 368 aa14.63□□□□□ -0.07
LRRC28-202ENST00000331450 MASP1P48740 699 aa14.63□□□□□ -0.07
LRRC28-202ENST00000331450 EEFSECP57772 596 aaKnown RBP14.63□□□□□ -0.07
LRRC28-202ENST00000331450 SLC25A3Q00325 362 aa14.63□□□□□ -0.07
LRRC28-202ENST00000331450 C17orf67Q0P5P2 114 aa14.63□□□□□ -0.07
LRRC28-202ENST00000331450 HMGN2P46Q86SG4 172 aa14.63□□□□□ -0.07
LRRC28-202ENST00000331450 PLCZ1Q86YW0 608 aa14.63□□□□□ -0.07
LRRC28-202ENST00000331450 SIAH3Q8IW03 269 aa14.63□□□□□ -0.07
LRRC28-202ENST00000331450 SLC30A8Q8IWU4 369 aa14.63□□□□□ -0.07
LRRC28-202ENST00000331450 CISD2Q8N5K1 135 aaKnown RBP14.63□□□□□ -0.07
LRRC28-202ENST00000331450 TMEM251Q8N6I4 163 aa14.63□□□□□ -0.07
LRRC28-202ENST00000331450 GATSQ8NAP1 163 aa14.63□□□□□ -0.07
LRRC28-202ENST00000331450 RBM15BQ8NDT2 890 aaKnown RBP14.63□□□□□ -0.07
LRRC28-202ENST00000331450 FAM71CQ8NEG0 241 aa14.63□□□□□ -0.07
LRRC28-202ENST00000331450 OR1J4Q8NGS1 313 aa14.63□□□□□ -0.07
LRRC28-202ENST00000331450 PIF1Q9H611 641 aa14.63□□□□□ -0.07
LRRC28-202ENST00000331450 ZDHHC11Q9H8X9 412 aa14.63□□□□□ -0.07
LRRC28-202ENST00000331450 SDHAF3Q9NRP4 125 aa14.63□□□□□ -0.07
LRRC28-202ENST00000331450 NDE1Q9NXR1 346 aa14.63□□□□□ -0.07
LRRC28-202ENST00000331450 PPP4R1LQ9P1A2 415 aa14.63□□□□□ -0.07
LRRC28-202ENST00000331450 GMPR2Q9P2T1 348 aaKnown RBP14.63□□□□□ -0.07
LRRC28-202ENST00000331450 ANGPT4Q9Y264 503 aa14.63□□□□□ -0.07
LRRC28-202ENST00000331450 GPC6Q9Y625 555 aaPredicted RBP14.63□□□□□ -0.07
LRRC28-202ENST00000331450 FREM3P0C091 2139 aa14.62□□□□□ -0.07
LRRC28-202ENST00000331450 CHD6Q8TD26 2715 aa14.62□□□□□ -0.07
LRRC28-202ENST00000331450 B2RBV5 119 aa14.62□□□□□ -0.07
LRRC28-202ENST00000331450 B8ZZF3 427 aa14.62□□□□□ -0.07
LRRC28-202ENST00000331450 C5orf58C9J3I9 102 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms