RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 DEFB103AP81534 67 aa9.98□□□□□ -0.81
CLN8-201ENST00000331222 UGT3A2Q3SY77 523 aa9.98□□□□□ -0.81
CLN8-201ENST00000331222 NIPAL1Q6NVV3 410 aa9.98□□□□□ -0.81
CLN8-201ENST00000331222 MARVELD2Q8N4S9 558 aa9.98□□□□□ -0.81
CLN8-201ENST00000331222 TMEM185AQ8NFB2 350 aa9.98□□□□□ -0.81
CLN8-201ENST00000331222 OR8J1Q8NGP2 316 aa9.98□□□□□ -0.81
CLN8-201ENST00000331222 TMEM19Q96HH6 336 aa9.98□□□□□ -0.81
CLN8-201ENST00000331222 PPIL3Q9H2H8 161 aaKnown RBP9.98□□□□□ -0.81
CLN8-201ENST00000331222 ARNT2Q9HBZ2 717 aa9.98□□□□□ -0.81
CLN8-201ENST00000331222 LRIT1Q9P2V4 623 aa9.98□□□□□ -0.81
CLN8-201ENST00000331222 DVL2O14641 736 aa9.98□□□□□ -0.81
CLN8-201ENST00000331222 ADAMTS4O75173 837 aa9.98□□□□□ -0.81
CLN8-201ENST00000331222 NCR1O76036 304 aa9.98□□□□□ -0.81
CLN8-201ENST00000331222 KCNE1P15382 129 aa9.98□□□□□ -0.81
CLN8-201ENST00000331222 PSMB5P28074 263 aa9.98□□□□□ -0.81
CLN8-201ENST00000331222 LRRC42Q9Y546 428 aa9.98□□□□□ -0.81
CLN8-201ENST00000331222 NSG1A0A0A6YYJ2 146 aa9.98□□□□□ -0.81
CLN8-201ENST00000331222 OR5K4A6NMS3 321 aa9.98□□□□□ -0.81
CLN8-201ENST00000331222 GLSO94925 669 aaPredicted RBP9.98□□□□□ -0.81
CLN8-201ENST00000331222 FAM163BP0C2L3 166 aa9.98□□□□□ -0.81
CLN8-201ENST00000331222 DEFA4P12838 97 aa9.98□□□□□ -0.81
CLN8-201ENST00000331222 AGTR1P30556 359 aa9.98□□□□□ -0.81
CLN8-201ENST00000331222 KCNC3Q14003 757 aa9.98□□□□□ -0.81
CLN8-201ENST00000331222 ZNF836Q6ZNA1 936 aa9.98□□□□□ -0.81
CLN8-201ENST00000331222 TMEM150AQ86TG1 271 aa9.98□□□□□ -0.81
CLN8-201ENST00000331222 PQLC3Q8N755 202 aa9.98□□□□□ -0.81
CLN8-201ENST00000331222 ISOC1Q96CN7 298 aa9.98□□□□□ -0.81
CLN8-201ENST00000331222 TCEAL4Q96EI5 215 aa9.98□□□□□ -0.81
CLN8-201ENST00000331222 NUP205Q92621 2012 aa9.98□□□□□ -0.81
CLN8-201ENST00000331222 A0A096LPI6 279 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 AQP7O14520 342 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 TIMP1P01033 207 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 UBL4AP11441 157 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 PPP5CP53041 499 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 MPP7Q5T2T1 576 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 ARHGAP11AQ6P4F7 1023 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 HCAR1Q9BXC0 346 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 HIPK2Q9H2X6 1198 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 DUSP13Q9UII6 198 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 LRRTM2O43300 516 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 IGHV3-9P01782 118 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 F3P13726 295 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 F2RP25116 425 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 RPL35P42766 123 aaKnown RBP9.97□□□□□ -0.81
CLN8-201ENST00000331222 ARSFP54793 590 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 RBPJQ06330 500 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 SNTB2Q13425 540 aaKnown RBP9.97□□□□□ -0.81
CLN8-201ENST00000331222 CYP1B1Q16678 543 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 ATPAF1Q5TC12 328 aaPredicted RBP9.97□□□□□ -0.81
CLN8-201ENST00000331222 STEAP4Q687X5 459 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 TEX26Q8N6G2 289 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 ASCC1Q8N9N2 400 aaKnown RBP9.97□□□□□ -0.81
CLN8-201ENST00000331222 SCRN2Q96FV2 425 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 PINK1Q9BXM7 581 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 ACTRT3Q9BYD9 372 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 DMAC2Q9NW81 257 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 BCAT2O15382 392 aaPredicted RBP9.97□□□□□ -0.81
CLN8-201ENST00000331222 RFPL1O75677 317 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 RHCEP18577 417 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 CDK2P24941 298 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 BMPR1AP36894 532 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 SLC6A11P48066 632 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 EXOSC6Q5RKV6 272 aaKnown RBP9.97□□□□□ -0.81
CLN8-201ENST00000331222 FAM57BQ71RH2 274 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 ABHD12BQ7Z5M8 362 aaPredicted RBP9.97□□□□□ -0.81
CLN8-201ENST00000331222 SLC43A2Q8N370 569 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 GOLM1Q8NBJ4 401 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 NTPCRQ9BSD7 190 aaKnown RBP9.97□□□□□ -0.81
CLN8-201ENST00000331222 RPS10P5Q9NQ39 176 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 TUBA8Q9NY65 449 aaPredicted RBP9.97□□□□□ -0.81
CLN8-201ENST00000331222 SLC23A2Q9UGH3 650 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 MED1Q15648 1581 aaPredicted RBP9.97□□□□□ -0.81
CLN8-201ENST00000331222 SCN3AQ9NY46 2000 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 CREBL2O60519 120 aaPredicted RBP9.97□□□□□ -0.81
CLN8-201ENST00000331222 IFNA10P01566 189 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 PIN1Q13526 163 aaPredicted RBP9.97□□□□□ -0.81
CLN8-201ENST00000331222 KCTD20Q7Z5Y7 419 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 PHOX2BQ99453 314 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 MFRPQ9BY79 579 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 GSRP00390 522 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 RAB3BP20337 219 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 CXCL12P48061 93 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 CSNK1A1P48729 337 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 IDH3GP51553 393 aaPredicted RBP9.97□□□□□ -0.81
CLN8-201ENST00000331222 NAGSQ8N159 534 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 SLC35B2Q8TB61 432 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 SYNPRQ8TBG9 265 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 CREB3L1Q96BA8 519 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 DCCP43146 1447 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 DVL1O14640 695 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 F2P00734 622 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 EVI2BP34910 448 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 ARSDP51689 593 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 DVL1P1P54792 670 aaPredicted RBP9.97□□□□□ -0.81
CLN8-201ENST00000331222 SPOCK1Q08629 439 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 UNC50Q53HI1 259 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 ZNF679Q8IYX0 411 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 CMTM1Q8IZ96 169 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 OR9A4Q8NGU2 314 aa9.97□□□□□ -0.81
CLN8-201ENST00000331222 OR5W2Q8NH69 310 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms