RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 LDLRAD3Q86YD5 345 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 BEST4Q8NFU0 473 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 OR4F15Q8NGB8 312 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 OR14A16Q8NHC5 309 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 VOPP1Q96AW1 172 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 IER2Q9BTL4 223 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 CPEB1Q9BZB8 566 aaKnown RBP7.86□□□□□ -1.15
SKA2-201ENST00000330137 ZNF768Q9H5H4 540 aaKnown RBP7.86□□□□□ -1.15
SKA2-201ENST00000330137 HRASLSQ9HDD0 168 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 CTPS2Q9NRF8 586 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 ARL15Q9NXU5 204 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 NLGN3Q9NZ94 848 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 METTL1Q9UBP6 276 aaKnown RBP7.86□□□□□ -1.15
SKA2-201ENST00000330137 ICKQ9UPZ9 632 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 CCL15-CCL14A0A0B4J2E2 113 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 IQCF5A8MTL0 148 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 KHDRBS3O75525 346 aaKnown RBP7.86□□□□□ -1.15
SKA2-201ENST00000330137 MOCS2O96007 188 aaPredicted RBP7.86□□□□□ -1.15
SKA2-201ENST00000330137 WNT1P04628 370 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 URODP06132 367 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 IL3P08700 152 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 CD3GP09693 182 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 PAICSP22234 425 aaKnown RBP7.86□□□□□ -1.15
SKA2-201ENST00000330137 UQCRC2P22695 453 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 MST1P26927 711 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 HTR2AP28223 471 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 OR1E1P30953 314 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 GDNFP39905 211 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 DDX39BQ13838 428 aaKnown RBP7.86□□□□□ -1.15
SKA2-201ENST00000330137 CCL15Q16663 113 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 EIF2S3LQ2VIR3 472 aaKnown RBP7.86□□□□□ -1.15
SKA2-201ENST00000330137 PAN3Q58A45 887 aaKnown RBP7.86□□□□□ -1.15
SKA2-201ENST00000330137 AADACL4Q5VUY2 407 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 GRHL2Q6ISB3 625 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 ACSM5Q6NUN0 579 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 FBXL22Q6P050 247 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 CTU1Q7Z7A3 348 aaKnown RBP7.86□□□□□ -1.15
SKA2-201ENST00000330137 C7orf57Q8NEG2 295 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 OR51Q1Q8NH59 317 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 PHYHIPQ92561 330 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 PPP1R16AQ96I34 528 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 ZNF285Q96NJ3 590 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 MTERF1Q99551 399 aaKnown RBP7.86□□□□□ -1.15
SKA2-201ENST00000330137 C16orf70Q9BSU1 422 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 EBPLQ9BY08 206 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 CDCP1Q9H5V8 836 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 GOLGA2P5Q9HBQ8 144 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 TRIM36Q9NQ86 728 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 RNF186Q9NXI6 227 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 NTMQ9P121 344 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 CFAP97Q9P2B7 532 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 DPP7Q9UHL4 492 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 PCOLCE2Q9UKZ9 415 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 PLEKHA6Q9Y2H5 1048 aa7.86□□□□□ -1.15
SKA2-201ENST00000330137 CD8B2A6NJW9 211 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 SLC9B1P1A6NJY1 282 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 RFPL4AA6NLU0 287 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 RFPL4AL1F8VTS6 287 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 PTGESO14684 152 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 KDELR3O43731 214 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 CD1AP06126 327 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 GLAP06280 429 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 ANXA4P09525 319 aaPredicted RBP7.85□□□□□ -1.15
SKA2-201ENST00000330137 ANKRD34CP0C6C1 535 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 ZNF806P0C7X5 589 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 SPP1P10451 314 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 CD8BP10966 210 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 ACRV1P26436 265 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 TIA1P31483 386 aaKnown RBP eCLIP7.85□□□□□ -1.155e-7■■□□□ 11.7
SKA2-201ENST00000330137 CCR8P51685 355 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 CDH11P55287 796 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 HBA1P69905 142 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 RAE1P78406 368 aaKnown RBP7.85□□□□□ -1.15
SKA2-201ENST00000330137 DGCR2P98153 550 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 CAP1Q01518 475 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 ZNF124Q15973 351 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 UBE2NLQ5JXB2 153 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 SPOUT1Q5T280 376 aaKnown RBP7.85□□□□□ -1.15
SKA2-201ENST00000330137 FAM111BQ6SJ93 734 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 WDR53Q7Z5U6 358 aaPredicted RBP7.85□□□□□ -1.15
SKA2-201ENST00000330137 SERPINA9Q86WD7 417 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 PUSL1Q8N0Z8 303 aaKnown RBP7.85□□□□□ -1.15
SKA2-201ENST00000330137 SPRYD4Q8WW59 207 aaPredicted RBP7.85□□□□□ -1.15
SKA2-201ENST00000330137 EDAQ92838 391 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 TRMT2BQ96GJ1 504 aaKnown RBP7.85□□□□□ -1.15
SKA2-201ENST00000330137 ZNF607Q96SK3 696 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 PKP4Q99569 1192 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 SEC11CQ9BY50 192 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 FBXO44Q9H4M3 255 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 BRD9Q9H8M2 597 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 NOX3Q9HBY0 568 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 TMEM138Q9NPI0 162 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 C2orf92A0A1B0GVN3 265 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 ARGFXA6NJG6 315 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 F5H5P2 479 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 H3BRB1 525 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 ARPC5O15511 151 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 UBXN7O94888 489 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 OR2F2O95006 317 aa7.85□□□□□ -1.15
SKA2-201ENST00000330137 NDUFB6O95139 128 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms