RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 ING2Q9H160 280 aa17.34■□□□□ 0.37
EXOSC3-201ENST00000327304 DUSP22Q9NRW4 184 aa17.34■□□□□ 0.37
EXOSC3-201ENST00000327304 WDR70Q9NW82 654 aa17.34■□□□□ 0.37
EXOSC3-201ENST00000327304 NDUFA13Q9P0J0 144 aa17.34■□□□□ 0.37
EXOSC3-201ENST00000327304 PPIEQ9UNP9 301 aaKnown RBP17.34■□□□□ 0.37
EXOSC3-201ENST00000327304 HSPE1-MOB4S4R3N1 261 aa17.34■□□□□ 0.37
EXOSC3-201ENST00000327304 TRIM64CA6NLI5 447 aa17.33■□□□□ 0.37
EXOSC3-201ENST00000327304 BCKDKO14874 412 aa17.33■□□□□ 0.37
EXOSC3-201ENST00000327304 PCDH17O14917 1159 aa17.33■□□□□ 0.37
EXOSC3-201ENST00000327304 ALPPP05187 535 aa17.33■□□□□ 0.37
EXOSC3-201ENST00000327304 LINGO3P0C6S8 592 aa17.33■□□□□ 0.37
EXOSC3-201ENST00000327304 LIFP15018 202 aa17.33■□□□□ 0.37
EXOSC3-201ENST00000327304 MAP3K8P41279 467 aa17.33■□□□□ 0.37
EXOSC3-201ENST00000327304 NR1H2P55055 460 aa17.33■□□□□ 0.37
EXOSC3-201ENST00000327304 TPD52P55327 224 aaPredicted RBP17.33■□□□□ 0.37
EXOSC3-201ENST00000327304 SMIM11AP58511 58 aa17.33■□□□□ 0.37
EXOSC3-201ENST00000327304 SLC26A5P58743 744 aa17.33■□□□□ 0.37
EXOSC3-201ENST00000327304 CHRNEQ04844 493 aa17.33■□□□□ 0.37
EXOSC3-201ENST00000327304 APCDD1LQ8NCL9 501 aa17.33■□□□□ 0.37
EXOSC3-201ENST00000327304 SETD9Q8NE22 299 aa17.33■□□□□ 0.37
EXOSC3-201ENST00000327304 CHDHQ8NE62 594 aaPredicted RBP17.33■□□□□ 0.37
EXOSC3-201ENST00000327304 CDS1Q92903 461 aa17.33■□□□□ 0.37
EXOSC3-201ENST00000327304 ITPAQ9BY32 194 aa17.33■□□□□ 0.37
EXOSC3-201ENST00000327304 GABARAPL3Q9BY60 117 aa17.33■□□□□ 0.37
EXOSC3-201ENST00000327304 COPS7AQ9UBW8 275 aa17.33■□□□□ 0.37
EXOSC3-201ENST00000327304 ZNF223Q9UK11 482 aaPredicted RBP17.33■□□□□ 0.37
EXOSC3-201ENST00000327304 PCSK5Q92824 1860 aa17.33■□□□□ 0.36
EXOSC3-201ENST00000327304 A0A087WXM4 84 aa17.33■□□□□ 0.36
EXOSC3-201ENST00000327304 A0A1W2PQ72 361 aa17.33■□□□□ 0.36
EXOSC3-201ENST00000327304 E9PQ18 207 aa17.33■□□□□ 0.36
EXOSC3-201ENST00000327304 FFAR1O14842 300 aa17.33■□□□□ 0.36
EXOSC3-201ENST00000327304 PRKNO60260 465 aaPredicted RBP17.33■□□□□ 0.36
EXOSC3-201ENST00000327304 ALOX5P09917 674 aa17.33■□□□□ 0.36
EXOSC3-201ENST00000327304 SRSF6Q13247 344 aaKnown RBP17.33■□□□□ 0.36
EXOSC3-201ENST00000327304 RBM48Q5RL73 367 aaKnown RBP17.33■□□□□ 0.36
EXOSC3-201ENST00000327304 RNF220Q5VTB9 566 aa17.33■□□□□ 0.36
EXOSC3-201ENST00000327304 C9orf40Q8IXQ3 194 aa17.33■□□□□ 0.36
EXOSC3-201ENST00000327304 OR52J3Q8NH60 311 aa17.33■□□□□ 0.36
EXOSC3-201ENST00000327304 HOXB13Q92826 284 aaPredicted RBP17.33■□□□□ 0.36
EXOSC3-201ENST00000327304 KIAA1143Q96AT1 154 aaPredicted RBP17.33■□□□□ 0.36
EXOSC3-201ENST00000327304 FEVQ99581 238 aa17.33■□□□□ 0.36
EXOSC3-201ENST00000327304 RIBC2Q9H4K1 309 aa17.33■□□□□ 0.36
EXOSC3-201ENST00000327304 MTHFD2LQ9H903 347 aaPredicted RBP17.33■□□□□ 0.36
EXOSC3-201ENST00000327304 POFUT2Q9Y2G5 429 aa17.33■□□□□ 0.36
EXOSC3-201ENST00000327304 MSRB2Q9Y3D2 182 aa17.33■□□□□ 0.36
EXOSC3-201ENST00000327304 FREM2Q5SZK8 3169 aa17.32■□□□□ 0.36
EXOSC3-201ENST00000327304 CCNB2O95067 398 aa17.32■□□□□ 0.36
EXOSC3-201ENST00000327304 AK1P00568 194 aa17.32■□□□□ 0.36
EXOSC3-201ENST00000327304 ATP6V1B1P15313 513 aa17.32■□□□□ 0.36
EXOSC3-201ENST00000327304 PRKAR1BP31321 381 aa17.32■□□□□ 0.36
EXOSC3-201ENST00000327304 POLR2IP36954 125 aaKnown RBP17.32■□□□□ 0.36
EXOSC3-201ENST00000327304 ISL1P61371 349 aa17.32■□□□□ 0.36
EXOSC3-201ENST00000327304 IL1RL1Q01638 556 aa17.32■□□□□ 0.36
EXOSC3-201ENST00000327304 NPRL3Q12980 569 aa17.32■□□□□ 0.36
EXOSC3-201ENST00000327304 ZNF311Q5JNZ3 666 aa17.32■□□□□ 0.36
EXOSC3-201ENST00000327304 DHRS4L2Q6PKH6 230 aa17.32■□□□□ 0.36
EXOSC3-201ENST00000327304 NPSR1Q6W5P4 371 aa17.32■□□□□ 0.36
EXOSC3-201ENST00000327304 OLIG3Q7RTU3 272 aa17.32■□□□□ 0.36
EXOSC3-201ENST00000327304 MRGPREQ86SM8 312 aa17.32■□□□□ 0.36
EXOSC3-201ENST00000327304 SLC5A8Q8N695 610 aa17.32■□□□□ 0.36
EXOSC3-201ENST00000327304 OR4D11Q8NGI4 311 aa17.32■□□□□ 0.36
EXOSC3-201ENST00000327304 NR4A3Q92570 626 aa17.32■□□□□ 0.36
EXOSC3-201ENST00000327304 HDAC2Q92769 488 aaKnown RBP17.32■□□□□ 0.36
EXOSC3-201ENST00000327304 IMMP1LQ96LU5 166 aa17.32■□□□□ 0.36
EXOSC3-201ENST00000327304 ALPK1Q96QP1 1244 aa17.32■□□□□ 0.36
EXOSC3-201ENST00000327304 LMF2Q9BU23 707 aaKnown RBP17.32■□□□□ 0.36
EXOSC3-201ENST00000327304 SEMA4CQ9C0C4 833 aa17.32■□□□□ 0.36
EXOSC3-201ENST00000327304 PRODH2Q9UF12 536 aa17.32■□□□□ 0.36
EXOSC3-201ENST00000327304 NDRG4Q9ULP0 352 aaKnown RBP17.32■□□□□ 0.36
EXOSC3-201ENST00000327304 IFT52Q9Y366 437 aa17.32■□□□□ 0.36
EXOSC3-201ENST00000327304 SMIM31A0A1B0GVY4 71 aa17.31■□□□□ 0.36
EXOSC3-201ENST00000327304 MASP2O00187 686 aa17.31■□□□□ 0.36
EXOSC3-201ENST00000327304 OXSR1O95747 527 aaPredicted RBP17.31■□□□□ 0.36
EXOSC3-201ENST00000327304 EPPINO95925 133 aa17.31■□□□□ 0.36
EXOSC3-201ENST00000327304 CLK3P49761 638 aaKnown RBP17.31■□□□□ 0.36
EXOSC3-201ENST00000327304 PSG6Q00889 435 aa17.31■□□□□ 0.36
EXOSC3-201ENST00000327304 CLN3Q13286 438 aa17.31■□□□□ 0.36
EXOSC3-201ENST00000327304 GANABQ14697 944 aaKnown RBP17.31■□□□□ 0.36
EXOSC3-201ENST00000327304 NNATQ16517 81 aa17.31■□□□□ 0.36
EXOSC3-201ENST00000327304 FRRS1Q6ZNA5 592 aa17.31■□□□□ 0.36
EXOSC3-201ENST00000327304 TAGAPQ8N103 731 aa17.31■□□□□ 0.36
EXOSC3-201ENST00000327304 VANGL1Q8TAA9 524 aaPredicted RBP17.31■□□□□ 0.36
EXOSC3-201ENST00000327304 ADAMTS16Q8TE57 1224 aa17.31■□□□□ 0.36
EXOSC3-201ENST00000327304 FBLIM1Q8WUP2 373 aa17.31■□□□□ 0.36
EXOSC3-201ENST00000327304 PIK3R3Q92569 461 aa17.31■□□□□ 0.36
EXOSC3-201ENST00000327304 PMM1Q92871 262 aa17.31■□□□□ 0.36
EXOSC3-201ENST00000327304 VMP1Q96GC9 406 aa17.31■□□□□ 0.36
EXOSC3-201ENST00000327304 PITX2Q99697 317 aa17.31■□□□□ 0.36
EXOSC3-201ENST00000327304 NMNAT1Q9HAN9 279 aaPredicted RBP17.31■□□□□ 0.36
EXOSC3-201ENST00000327304 PAPOLBQ9NRJ5 636 aaKnown RBP17.31■□□□□ 0.36
EXOSC3-201ENST00000327304 FBXL4Q9UKA2 621 aa17.31■□□□□ 0.36
EXOSC3-201ENST00000327304 GXYLT2A0PJZ3 443 aa17.31■□□□□ 0.36
EXOSC3-201ENST00000327304 SEMA7AO75326 666 aa17.31■□□□□ 0.36
EXOSC3-201ENST00000327304 NKX2-2O95096 273 aa17.31■□□□□ 0.36
EXOSC3-201ENST00000327304 H1F0P07305 194 aaKnown RBP17.31■□□□□ 0.36
EXOSC3-201ENST00000327304 CELA2AP08217 269 aa17.31■□□□□ 0.36
EXOSC3-201ENST00000327304 GABRA3P34903 492 aa17.31■□□□□ 0.36
EXOSC3-201ENST00000327304 TOP3AQ13472 1001 aaPredicted RBP17.31■□□□□ 0.36
EXOSC3-201ENST00000327304 EBPQ15125 230 aaKnown RBP17.31■□□□□ 0.36
EXOSC3-201ENST00000327304 AP1ARQ63HQ0 302 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms