RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 ST8SIA4Q92187 359 aa16.71■□□□□ 0.27
PRKCB-202ENST00000321728 KLHL15Q96M94 604 aa16.71■□□□□ 0.27
PRKCB-202ENST00000321728 MED20Q9H944 212 aa16.71■□□□□ 0.27
PRKCB-202ENST00000321728 GPR55Q9Y2T6 319 aaPredicted RBP16.71■□□□□ 0.27
PRKCB-202ENST00000321728 KIF26AQ9ULI4 1882 aaPredicted RBP16.71■□□□□ 0.27
PRKCB-202ENST00000321728 SCN5AQ14524 2016 aa16.71■□□□□ 0.27
PRKCB-202ENST00000321728 PPM1BO75688 479 aa16.71■□□□□ 0.26
PRKCB-202ENST00000321728 ICAM2P13598 275 aa16.71■□□□□ 0.26
PRKCB-202ENST00000321728 KELP23276 732 aa16.71■□□□□ 0.26
PRKCB-202ENST00000321728 FRKP42685 505 aaPredicted RBP16.71■□□□□ 0.26
PRKCB-202ENST00000321728 NCBP2P52298 156 aaKnown RBP eCLIP16.71■□□□□ 0.26
PRKCB-202ENST00000321728 EPHB3P54753 998 aa16.71■□□□□ 0.26
PRKCB-202ENST00000321728 SHC2P98077 582 aa16.71■□□□□ 0.26
PRKCB-202ENST00000321728 BDH1Q02338 343 aa16.71■□□□□ 0.26
PRKCB-202ENST00000321728 FUT5Q11128 374 aa16.71■□□□□ 0.26
PRKCB-202ENST00000321728 OPCMLQ14982 345 aa16.71■□□□□ 0.26
PRKCB-202ENST00000321728 ANKRD53Q8N9V6 530 aa16.71■□□□□ 0.26
PRKCB-202ENST00000321728 OR2T33Q8NG76 320 aa16.71■□□□□ 0.26
PRKCB-202ENST00000321728 SORCS1Q8WY21 1168 aa16.71■□□□□ 0.26
PRKCB-202ENST00000321728 PINK1Q9BXM7 581 aa16.71■□□□□ 0.26
PRKCB-202ENST00000321728 GSDMCQ9BYG8 508 aa16.71■□□□□ 0.26
PRKCB-202ENST00000321728 OR2AG1Q9H205 316 aa16.71■□□□□ 0.26
PRKCB-202ENST00000321728 RABL2BQ9UNT1 228 aa16.71■□□□□ 0.26
PRKCB-202ENST00000321728 NTNG1Q9Y2I2 539 aa16.71■□□□□ 0.26
PRKCB-202ENST00000321728 PRKAB1Q9Y478 270 aa16.71■□□□□ 0.26
PRKCB-202ENST00000321728 A0A0B4J203 849 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 A0A1W2PRG6 482 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 GLOD5A6NK44 160 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 LRRN3E7EW58 273 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 E9PI62 339 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 TBX19O60806 448 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 UBL3O95164 117 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 WNT1P04628 370 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 ZP3P21754 424 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 BMP8BP34820 402 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 STAT5AP42229 794 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 TUSC1Q2TAM9 212 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 SFRP4Q6FHJ7 346 aaPredicted RBP16.7■□□□□ 0.26
PRKCB-202ENST00000321728 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.7■□□□□ 0.263e-11■■□□□ 12.1
PRKCB-202ENST00000321728 BMP8AQ7Z5Y6 402 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 FAM129CQ86XR2 697 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 CPXM2Q8N436 756 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 SAMD8Q96LT4 415 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 SFXN2Q96NB2 322 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 NRTNQ99748 197 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 FAIM2Q9BWQ8 316 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 MS4A8Q9BY19 250 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 ZCCHC2Q9C0B9 1178 aaKnown RBP16.7■□□□□ 0.26
PRKCB-202ENST00000321728 ACTR6Q9GZN1 396 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 LRRN3Q9H3W5 708 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 BCL2L10Q9HD36 194 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 ACSS1Q9NUB1 689 aaPredicted RBP16.7■□□□□ 0.26
PRKCB-202ENST00000321728 MED17Q9NVC6 651 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 IL20Q9NYY1 176 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 MRPL15Q9P015 296 aaKnown RBP16.7■□□□□ 0.26
PRKCB-202ENST00000321728 TRABD2BA6NFA1 517 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 G3V3Q6 166 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 SERPIND1P05546 499 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 SNRPBP14678 240 aaKnown RBP16.7■□□□□ 0.26
PRKCB-202ENST00000321728 TIMP2P16035 220 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 UGT2B7P16662 529 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 TRHRP34981 398 aaPredicted RBP16.7■□□□□ 0.26
PRKCB-202ENST00000321728 GCGRP47871 477 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 STXBP1P61764 594 aaKnown RBP16.7■□□□□ 0.26
PRKCB-202ENST00000321728 PITPNAQ00169 270 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 ZMYND11Q15326 602 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 TCTE1Q5JU00 501 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 TPGS2Q68CL5 300 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 ASTLQ6HA08 431 aaPredicted RBP16.7■□□□□ 0.26
PRKCB-202ENST00000321728 HTR3DQ70Z44 454 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 PRSS45Q7RTY3 260 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 NUDT13Q86X67 352 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 VRK2Q86Y07 508 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 ABHD4Q8TB40 342 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 PIGKQ92643 395 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 ZNF578Q96N58 590 aaPredicted RBP16.7■□□□□ 0.26
PRKCB-202ENST00000321728 AMDHD1Q96NU7 426 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 C20orf85Q9H1P6 137 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 TAC3Q9UHF0 121 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 KIF25Q9UIL4 384 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 POMT2Q9UKY4 750 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 FLVCR2Q9UPI3 526 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 ASF1AQ9Y294 204 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 SESN1Q9Y6P5 492 aa16.7■□□□□ 0.26
PRKCB-202ENST00000321728 A0A0G2JK05 382 aa16.69■□□□□ 0.26
PRKCB-202ENST00000321728 TOR1AO14656 332 aa16.69■□□□□ 0.26
PRKCB-202ENST00000321728 PIP5K1CO60331 668 aa16.69■□□□□ 0.26
PRKCB-202ENST00000321728 RGS11O94810 467 aa16.69■□□□□ 0.26
PRKCB-202ENST00000321728 IFNA16P05015 189 aa16.69■□□□□ 0.26
PRKCB-202ENST00000321728 ALDOBP05062 364 aa16.69■□□□□ 0.26
PRKCB-202ENST00000321728 ELFN1P0C7U0 828 aa16.69■□□□□ 0.26
PRKCB-202ENST00000321728 SELPP16109 830 aa16.69■□□□□ 0.26
PRKCB-202ENST00000321728 PRKACAP17612 351 aa16.69■□□□□ 0.26
PRKCB-202ENST00000321728 FPR3P25089 353 aa16.69■□□□□ 0.26
PRKCB-202ENST00000321728 GABRR2P28476 465 aa16.69■□□□□ 0.26
PRKCB-202ENST00000321728 ACVR1BP36896 505 aa16.69■□□□□ 0.26
PRKCB-202ENST00000321728 MMP15P51511 669 aa16.69■□□□□ 0.26
PRKCB-202ENST00000321728 SLC16A1P53985 500 aa16.69■□□□□ 0.26
PRKCB-202ENST00000321728 RAG2P55895 527 aa16.69■□□□□ 0.26
PRKCB-202ENST00000321728 E2F1Q01094 437 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms