RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 ZNF554Q86TJ5 538 aa11.75□□□□□ -0.53
PTPN6-201ENST00000318974 PPP1R3BQ86XI6 285 aa11.75□□□□□ -0.53
PTPN6-201ENST00000318974 CTHRC1Q96CG8 243 aa11.75□□□□□ -0.53
PTPN6-201ENST00000318974 OR7D2Q96RA2 312 aa11.75□□□□□ -0.53
PTPN6-201ENST00000318974 CDCA4Q9BXL8 241 aa11.75□□□□□ -0.53
PTPN6-201ENST00000318974 DCSTAMPQ9H295 470 aa11.75□□□□□ -0.53
PTPN6-201ENST00000318974 REV1Q9UBZ9 1251 aa11.75□□□□□ -0.53
PTPN6-201ENST00000318974 CLDN16Q9Y5I7 305 aa11.75□□□□□ -0.53
PTPN6-201ENST00000318974 BDP1A6H8Y1 2624 aa11.75□□□□□ -0.53
PTPN6-201ENST00000318974 NCOR1O75376 2440 aa11.75□□□□□ -0.53
PTPN6-201ENST00000318974 DUXAA6NLW8 204 aa11.75□□□□□ -0.53
PTPN6-201ENST00000318974 OR10H3O60404 316 aa11.75□□□□□ -0.53
PTPN6-201ENST00000318974 CNOT3O75175 753 aaKnown RBP11.75□□□□□ -0.53
PTPN6-201ENST00000318974 TIAF1O95411 115 aa11.75□□□□□ -0.53
PTPN6-201ENST00000318974 HBQ1P09105 142 aa11.75□□□□□ -0.53
PTPN6-201ENST00000318974 CT62P0C5K7 136 aa11.75□□□□□ -0.53
PTPN6-201ENST00000318974 MAOAP21397 527 aa11.75□□□□□ -0.53
PTPN6-201ENST00000318974 SNRPGP62308 76 aaKnown RBP11.75□□□□□ -0.53
PTPN6-201ENST00000318974 SEC23BQ15437 767 aa11.75□□□□□ -0.53
PTPN6-201ENST00000318974 CSRP2Q16527 193 aa11.75□□□□□ -0.53
PTPN6-201ENST00000318974 TMEM236Q5W0B7 351 aa11.75□□□□□ -0.53
PTPN6-201ENST00000318974 PWWP2BQ6NUJ5 590 aa11.75□□□□□ -0.53
PTPN6-201ENST00000318974 CDC73Q6P1J9 531 aa11.75□□□□□ -0.53
PTPN6-201ENST00000318974 GALNT12Q8IXK2 581 aa11.75□□□□□ -0.53
PTPN6-201ENST00000318974 LINC00471Q8N535 108 aa11.75□□□□□ -0.53
PTPN6-201ENST00000318974 VANGL1Q8TAA9 524 aaPredicted RBP11.75□□□□□ -0.53
PTPN6-201ENST00000318974 ADAMTS15Q8TE58 950 aa11.75□□□□□ -0.53
PTPN6-201ENST00000318974 DOK4Q8TEW6 326 aa11.75□□□□□ -0.53
PTPN6-201ENST00000318974 OTUB1Q96FW1 271 aaPredicted RBP11.75□□□□□ -0.53
PTPN6-201ENST00000318974 PELOQ9BRX2 385 aaKnown RBP11.75□□□□□ -0.53
PTPN6-201ENST00000318974 FUZQ9BT04 418 aa11.75□□□□□ -0.53
PTPN6-201ENST00000318974 BTBD2Q9BX70 525 aa11.75□□□□□ -0.53
PTPN6-201ENST00000318974 NCDNQ9UBB6 729 aa11.75□□□□□ -0.53
PTPN6-201ENST00000318974 SLC9A8Q9Y2E8 581 aa11.75□□□□□ -0.53
PTPN6-201ENST00000318974 COL5A1P20908 1838 aaPredicted RBP11.75□□□□□ -0.53
PTPN6-201ENST00000318974 ADAMTS20P59510 1910 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 A0A1W2PRQ8 180 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 OR2W5A6NFC9 320 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 KPNA4O00629 521 aaPredicted RBP11.74□□□□□ -0.53
PTPN6-201ENST00000318974 UGT2B17O75795 530 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 PTHP01270 115 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 FGF5P12034 268 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 SLC15A1P46059 708 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 MAN2A2P49641 1150 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 IL11RAQ14626 422 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 MFSD4BQ5TF39 518 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 PRAMEF8Q5VWM4 474 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 PRAMEF7Q5VXH5 474 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 SLX4IPQ5VYV7 408 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 DGAT2L6Q6ZPD8 337 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 QSOX2Q6ZRP7 698 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 USP43Q70EL4 1123 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 VWA5B2Q8N398 1253 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 MFSD4AQ8N468 514 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 SIMC1Q8NDZ2 872 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 OR4D11Q8NGI4 311 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 RIT1Q92963 219 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 CLIP3Q96DZ5 547 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 Q96MT0 163 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 PTCHD1Q96NR3 888 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 DACH2Q96NX9 599 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 LRFN3Q9BTN0 628 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 APMAPQ9HDC9 416 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 ADAP2Q9NPF8 381 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 MKKSQ9NPJ1 570 aaPredicted RBP11.74□□□□□ -0.53
PTPN6-201ENST00000318974 A4GNTQ9UNA3 340 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 A3GALT2U3KPV4 340 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 RP1P56715 2156 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 C4orf47A7E2U8 309 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 M0R129 80 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 AGR2O95994 175 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 GADD45AP24522 165 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 POU1F1P28069 291 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 PDX1P52945 283 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 ATP1A4Q13733 1029 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 MINDY4Q4G0A6 757 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 ARMCX4Q5H9R4 360 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 TMEM201Q5SNT2 666 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 ATAD3BQ5T9A4 648 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 PLAG1Q6DJT9 500 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 PGBD2Q6P3X8 592 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 ZCCHC12Q6PEW1 402 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 RBM45Q8IUH3 476 aaKnown RBP11.74□□□□□ -0.53
PTPN6-201ENST00000318974 NLGN4XQ8N0W4 816 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 C7orf57Q8NEG2 295 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 SLC7A13Q8TCU3 470 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 SLC9A6Q92581 669 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 CDC6Q99741 560 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 POLR2J3Q9H1A7 115 aaKnown RBP11.74□□□□□ -0.53
PTPN6-201ENST00000318974 MMP27Q9H306 513 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 ZBTB20Q9HC78 741 aaPredicted RBP11.74□□□□□ -0.53
PTPN6-201ENST00000318974 KCNE3Q9Y6H6 103 aa11.74□□□□□ -0.53
PTPN6-201ENST00000318974 A0A0G2JPF8 293 aa11.73□□□□□ -0.53
PTPN6-201ENST00000318974 HNRNPCL2B2RXH8 293 aa11.73□□□□□ -0.53
PTPN6-201ENST00000318974 HNRNPCL3B7ZW38 293 aa11.73□□□□□ -0.53
PTPN6-201ENST00000318974 POLR1CO15160 346 aaPredicted RBP11.73□□□□□ -0.53
PTPN6-201ENST00000318974 LRP3O75074 770 aa11.73□□□□□ -0.53
PTPN6-201ENST00000318974 NME6O75414 186 aaPredicted RBP11.73□□□□□ -0.53
PTPN6-201ENST00000318974 IFNA16P05015 189 aa11.73□□□□□ -0.53
PTPN6-201ENST00000318974 HNRNPCL4P0DMR1 293 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms