RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 ZSCAN1Q8NBB4 408 aa15.46■□□□□ 0.07
CLCF1-201ENST00000312438 RHOXF1Q8NHV9 184 aa15.46■□□□□ 0.07
CLCF1-201ENST00000312438 FAM81AQ8TBF8 368 aa15.46■□□□□ 0.07
CLCF1-201ENST00000312438 GNPDA2Q8TDQ7 276 aa15.46■□□□□ 0.07
CLCF1-201ENST00000312438 SLC35B4Q969S0 331 aa15.46■□□□□ 0.07
CLCF1-201ENST00000312438 DGCR14Q96DF8 476 aaKnown RBP15.46■□□□□ 0.07
CLCF1-201ENST00000312438 LCORQ96JN0 433 aaPredicted RBP15.46■□□□□ 0.07
CLCF1-201ENST00000312438 HOXD1Q9GZZ0 328 aa15.46■□□□□ 0.07
CLCF1-201ENST00000312438 APMAPQ9HDC9 416 aa15.46■□□□□ 0.07
CLCF1-201ENST00000312438 TESQ9UGI8 421 aaKnown RBP15.46■□□□□ 0.07
CLCF1-201ENST00000312438 MRTO4Q9UKD2 239 aaKnown RBP15.46■□□□□ 0.07
CLCF1-201ENST00000312438 NTNG1Q9Y2I2 539 aa15.46■□□□□ 0.07
CLCF1-201ENST00000312438 SCN2AQ99250 2005 aa15.46■□□□□ 0.07
CLCF1-201ENST00000312438 PTGES3LE9PB15 166 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 THY1P04216 161 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 PRG2P13727 222 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 POU1F1P28069 291 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 CDC42P60953 191 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 OR1Q1Q15612 314 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 ZNF385CQ66K41 422 aaPredicted RBP15.45■□□□□ 0.06
CLCF1-201ENST00000312438 PRICKLE2Q7Z3G6 844 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 P3H2Q8IVL5 708 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 NKAIN4Q8IVV8 208 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 OR1N1Q8NGS0 311 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 OIT3Q8WWZ8 545 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 ADIPOR1Q96A54 375 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 NUDT9Q9BW91 350 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 COPS7AQ9UBW8 275 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 AASSQ9UDR5 926 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 C2orf92A0A1B0GVN3 265 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 LNP1A1A4G5 178 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 FRG2CA6NGY1 282 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 H3BN98 237 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 MPZL2O60487 215 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 ABCB7O75027 752 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 HEXBP07686 556 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 FMO3P31513 532 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 TEKQ02763 1124 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 FGFBP1Q14512 234 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 BORAQ6PGQ7 559 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 KCTD8Q6ZWB6 473 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 CNOT9Q92600 299 aaKnown RBP15.45■□□□□ 0.06
CLCF1-201ENST00000312438 RNF31Q96EP0 1072 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 ZNF559Q9BR84 538 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 TMEM27Q9HBJ8 222 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 IMPAD1Q9NX62 359 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 SLC7A7Q9UM01 511 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 R4GN57 208 aa15.45■□□□□ 0.06
CLCF1-201ENST00000312438 VSTM2BA6NLU5 285 aa15.44■□□□□ 0.06
CLCF1-201ENST00000312438 OR6C76A6NM76 312 aa15.44■□□□□ 0.06
CLCF1-201ENST00000312438 XPNPEP2O43895 674 aa15.44■□□□□ 0.06
CLCF1-201ENST00000312438 WBP4O75554 376 aaKnown RBP15.44■□□□□ 0.06
CLCF1-201ENST00000312438 IL33O95760 270 aa15.44■□□□□ 0.06
CLCF1-201ENST00000312438 HTR2AP28223 471 aa15.44■□□□□ 0.06
CLCF1-201ENST00000312438 GSSP48637 474 aa15.44■□□□□ 0.06
CLCF1-201ENST00000312438 LSM11P83369 360 aaKnown RBP eCLIP15.44■□□□□ 0.06
CLCF1-201ENST00000312438 HLA-DQA1Q5Y7H0 255 aa15.44■□□□□ 0.06
CLCF1-201ENST00000312438 SHISA6Q6ZSJ9 500 aa15.44■□□□□ 0.06
CLCF1-201ENST00000312438 MBOAT2Q6ZWT7 520 aa15.44■□□□□ 0.06
CLCF1-201ENST00000312438 ZNF550Q7Z398 422 aa15.44■□□□□ 0.06
CLCF1-201ENST00000312438 NLGN4XQ8N0W4 816 aa15.44■□□□□ 0.06
CLCF1-201ENST00000312438 BMPERQ8N8U9 685 aa15.44■□□□□ 0.06
CLCF1-201ENST00000312438 OR4C3Q8NH37 302 aa15.44■□□□□ 0.06
CLCF1-201ENST00000312438 PIGXQ8TBF5 258 aa15.44■□□□□ 0.06
CLCF1-201ENST00000312438 APH1BQ8WW43 257 aa15.44■□□□□ 0.06
CLCF1-201ENST00000312438 CTRCQ99895 268 aa15.44■□□□□ 0.06
CLCF1-201ENST00000312438 NXF5Q9H1B4 397 aaKnown RBP15.44■□□□□ 0.06
CLCF1-201ENST00000312438 DUSP21Q9H596 190 aa15.44■□□□□ 0.06
CLCF1-201ENST00000312438 VCX3AQ9NNX9 186 aa15.44■□□□□ 0.06
CLCF1-201ENST00000312438 FBXO8Q9NRD0 319 aa15.44■□□□□ 0.06
CLCF1-201ENST00000312438 IDSB3KWA1 339 aa15.43■□□□□ 0.06
CLCF1-201ENST00000312438 MEN1O00255 615 aa15.43■□□□□ 0.06
CLCF1-201ENST00000312438 GALR2O43603 387 aaPredicted RBP15.43■□□□□ 0.06
CLCF1-201ENST00000312438 BCAS1O75363 584 aaPredicted RBP15.43■□□□□ 0.06
CLCF1-201ENST00000312438 OR6B1O95007 311 aa15.43■□□□□ 0.06
CLCF1-201ENST00000312438 OMPP47874 163 aa15.43■□□□□ 0.06
CLCF1-201ENST00000312438 RNF144AP50876 292 aaPredicted RBP15.43■□□□□ 0.06
CLCF1-201ENST00000312438 MC2RQ01718 297 aa15.43■□□□□ 0.06
CLCF1-201ENST00000312438 PLAURQ03405 335 aa15.43■□□□□ 0.06
CLCF1-201ENST00000312438 TSPAN31Q12999 210 aa15.43■□□□□ 0.06
CLCF1-201ENST00000312438 EBPQ15125 230 aaKnown RBP15.43■□□□□ 0.06
CLCF1-201ENST00000312438 TMEM236Q5W0B7 351 aa15.43■□□□□ 0.06
CLCF1-201ENST00000312438 LAIR1Q6GTX8 287 aa15.43■□□□□ 0.06
CLCF1-201ENST00000312438 ZNF613Q6PF04 617 aa15.43■□□□□ 0.06
CLCF1-201ENST00000312438 RBM44Q6ZP01 1051 aaKnown RBP15.43■□□□□ 0.06
CLCF1-201ENST00000312438 RNF113BQ8IZP6 322 aaKnown RBP15.43■□□□□ 0.06
CLCF1-201ENST00000312438 SPARTQ8N0X7 666 aa15.43■□□□□ 0.06
CLCF1-201ENST00000312438 METTL21AQ8WXB1 218 aa15.43■□□□□ 0.06
CLCF1-201ENST00000312438 TMIGD2Q96BF3 282 aa15.43■□□□□ 0.06
CLCF1-201ENST00000312438 NODALQ96S42 347 aa15.43■□□□□ 0.06
CLCF1-201ENST00000312438 GPA33Q99795 319 aa15.43■□□□□ 0.06
CLCF1-201ENST00000312438 POLR1BQ9H9Y6 1135 aa15.43■□□□□ 0.06
CLCF1-201ENST00000312438 KRCC1Q9NPI7 259 aaPredicted RBP15.43■□□□□ 0.06
CLCF1-201ENST00000312438 UBQLN4Q9NRR5 601 aa15.43■□□□□ 0.06
CLCF1-201ENST00000312438 DNAJB12Q9NXW2 375 aaKnown RBP15.43■□□□□ 0.06
CLCF1-201ENST00000312438 ZNF226Q9NYT6 803 aa15.43■□□□□ 0.06
CLCF1-201ENST00000312438 SNX5Q9Y5X3 404 aa15.43■□□□□ 0.06
CLCF1-201ENST00000312438 ADAMTS9Q9P2N4 1935 aa15.43■□□□□ 0.06
CLCF1-201ENST00000312438 CCDC88CQ9P219 2028 aa15.43■□□□□ 0.06
CLCF1-201ENST00000312438 SERINC4A6NH21 518 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms