RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 TBL1XR1Q9BZK7 514 aa8.29□□□□□ -1.08
PDE4D-201ENST00000309641 UBQLN3Q9H347 655 aa8.29□□□□□ -1.08
PDE4D-201ENST00000309641 ZNF703Q9H7S9 590 aaPredicted RBP8.29□□□□□ -1.08
PDE4D-201ENST00000309641 KAT8Q9H7Z6 458 aaKnown RBP8.29□□□□□ -1.08
PDE4D-201ENST00000309641 MED11Q9P086 117 aa8.29□□□□□ -1.08
PDE4D-201ENST00000309641 TNFRSF10DQ9UBN6 386 aa8.29□□□□□ -1.08
PDE4D-201ENST00000309641 PCDHGB3Q9Y5G1 929 aa8.29□□□□□ -1.08
PDE4D-201ENST00000309641 POLEQ07864 2286 aa8.29□□□□□ -1.08
PDE4D-201ENST00000309641 CCT8L1PA6NM43 557 aa8.29□□□□□ -1.08
PDE4D-201ENST00000309641 BBIP1A8MTZ0 92 aa8.29□□□□□ -1.08
PDE4D-201ENST00000309641 TFECO14948 347 aaPredicted RBP8.29□□□□□ -1.08
PDE4D-201ENST00000309641 SNPHO15079 494 aa8.29□□□□□ -1.08
PDE4D-201ENST00000309641 KIAA0513O60268 411 aa8.29□□□□□ -1.08
PDE4D-201ENST00000309641 SNX4O95219 450 aa8.29□□□□□ -1.08
PDE4D-201ENST00000309641 WISP1O95388 367 aa8.29□□□□□ -1.08
PDE4D-201ENST00000309641 CBX6O95503 412 aa8.29□□□□□ -1.08
PDE4D-201ENST00000309641 SLC6A2P23975 617 aa8.29□□□□□ -1.08
PDE4D-201ENST00000309641 UQCRFS1P47985 274 aa8.29□□□□□ -1.08
PDE4D-201ENST00000309641 GZMMP51124 257 aa8.29□□□□□ -1.08
PDE4D-201ENST00000309641 ATP12AP54707 1039 aa8.29□□□□□ -1.08
PDE4D-201ENST00000309641 FADDQ13158 208 aa8.29□□□□□ -1.08
PDE4D-201ENST00000309641 MRPL49Q13405 166 aaKnown RBP8.29□□□□□ -1.08
PDE4D-201ENST00000309641 SNTA1Q13424 505 aa8.29□□□□□ -1.08
PDE4D-201ENST00000309641 COQ5Q5HYK3 327 aa8.29□□□□□ -1.08
PDE4D-201ENST00000309641 TBCELQ5QJ74 424 aa8.29□□□□□ -1.08
PDE4D-201ENST00000309641 CBLN3Q6UW01 205 aa8.29□□□□□ -1.08
PDE4D-201ENST00000309641 PTOV1Q86YD1 416 aa8.29□□□□□ -1.08
PDE4D-201ENST00000309641 CHERPQ8IWX8 916 aaKnown RBP8.29□□□□□ -1.08
PDE4D-201ENST00000309641 OR10A6Q8NH74 314 aa8.29□□□□□ -1.08
PDE4D-201ENST00000309641 NFKBIDQ8NI38 313 aa8.29□□□□□ -1.08
PDE4D-201ENST00000309641 MIB2Q96AX9 1013 aa8.29□□□□□ -1.08
PDE4D-201ENST00000309641 SH3YL1Q96HL8 342 aaPredicted RBP8.29□□□□□ -1.08
PDE4D-201ENST00000309641 TMEM41AQ96HV5 264 aa8.29□□□□□ -1.08
PDE4D-201ENST00000309641 TRNT1Q96Q11 434 aaKnown RBP8.29□□□□□ -1.08
PDE4D-201ENST00000309641 NPAS1Q99742 590 aa8.29□□□□□ -1.08
PDE4D-201ENST00000309641 TREX2Q9BQ50 279 aaPredicted RBP8.29□□□□□ -1.08
PDE4D-201ENST00000309641 SAP130Q9H0E3 1048 aa8.29□□□□□ -1.08
PDE4D-201ENST00000309641 ZDHHC11Q9H8X9 412 aa8.29□□□□□ -1.08
PDE4D-201ENST00000309641 RYDENQ9NUL5 291 aaKnown RBP8.29□□□□□ -1.08
PDE4D-201ENST00000309641 FASNP49327 2511 aaKnown RBP8.29□□□□□ -1.08
PDE4D-201ENST00000309641 UBR5O95071 2799 aaPredicted RBP8.28□□□□□ -1.08
PDE4D-201ENST00000309641 GCN1Q92616 2671 aaKnown RBP8.28□□□□□ -1.08
PDE4D-201ENST00000309641 EVPLLA8MZ36 301 aa8.28□□□□□ -1.08
PDE4D-201ENST00000309641 SCDO00767 359 aa8.28□□□□□ -1.08
PDE4D-201ENST00000309641 NDUFB5O43674 189 aa8.28□□□□□ -1.08
PDE4D-201ENST00000309641 CDC40O60508 579 aaKnown RBP eCLIP8.28□□□□□ -1.08
PDE4D-201ENST00000309641 AGR2O95994 175 aa8.28□□□□□ -1.08
PDE4D-201ENST00000309641 AK1P00568 194 aa8.28□□□□□ -1.08
PDE4D-201ENST00000309641 CRYABP02511 175 aaKnown RBP8.28□□□□□ -1.08
PDE4D-201ENST00000309641 NGFRP08138 427 aa8.28□□□□□ -1.08
PDE4D-201ENST00000309641 ARAFP10398 606 aa8.28□□□□□ -1.08
PDE4D-201ENST00000309641 NUDT2P50583 147 aa8.28□□□□□ -1.08
PDE4D-201ENST00000309641 RPP38P78345 283 aaKnown RBP8.28□□□□□ -1.08
PDE4D-201ENST00000309641 HYAL4Q2M3T9 481 aa8.28□□□□□ -1.08
PDE4D-201ENST00000309641 AP1ARQ63HQ0 302 aa8.28□□□□□ -1.08
PDE4D-201ENST00000309641 LRRC74BQ6ZQY2 392 aa8.28□□□□□ -1.08
PDE4D-201ENST00000309641 FGD2Q7Z6J4 655 aa8.28□□□□□ -1.08
PDE4D-201ENST00000309641 YRDCQ86U90 279 aaKnown RBP8.28□□□□□ -1.08
PDE4D-201ENST00000309641 PLCZ1Q86YW0 608 aa8.28□□□□□ -1.08
PDE4D-201ENST00000309641 ZNF619Q8N2I2 560 aa8.28□□□□□ -1.08
PDE4D-201ENST00000309641 PCYOX1LQ8NBM8 494 aa8.28□□□□□ -1.08
PDE4D-201ENST00000309641 OR1J4Q8NGS1 313 aa8.28□□□□□ -1.08
PDE4D-201ENST00000309641 DNAJB8Q8NHS0 232 aa8.28□□□□□ -1.08
PDE4D-201ENST00000309641 PHOSPHO1Q8TCT1 267 aa8.28□□□□□ -1.08
PDE4D-201ENST00000309641 CMTM5Q96DZ9 223 aa8.28□□□□□ -1.08
PDE4D-201ENST00000309641 GPATCH1Q9BRR8 931 aaKnown RBP8.28□□□□□ -1.08
PDE4D-201ENST00000309641 SLC6A15Q9H2J7 730 aa8.28□□□□□ -1.08
PDE4D-201ENST00000309641 DSN1Q9H410 356 aa8.28□□□□□ -1.08
PDE4D-201ENST00000309641 A4GALTQ9NPC4 353 aa8.28□□□□□ -1.08
PDE4D-201ENST00000309641 CMTM6Q9NX76 183 aa8.28□□□□□ -1.08
PDE4D-201ENST00000309641 P2RX2Q9UBL9 471 aa8.28□□□□□ -1.08
PDE4D-201ENST00000309641 BOKQ9UMX3 212 aaPredicted RBP8.28□□□□□ -1.08
PDE4D-201ENST00000309641 ABCG2Q9UNQ0 655 aa8.28□□□□□ -1.08
PDE4D-201ENST00000309641 C15orf41Q9Y2V0 281 aa8.28□□□□□ -1.08
PDE4D-201ENST00000309641 HEATR5AQ86XA9 2040 aa8.28□□□□□ -1.08
PDE4D-201ENST00000309641 ADAM11O75078 769 aa8.27□□□□□ -1.09
PDE4D-201ENST00000309641 GCM2O75603 506 aaPredicted RBP8.27□□□□□ -1.09
PDE4D-201ENST00000309641 TRAPPC6AO75865 159 aa8.27□□□□□ -1.09
PDE4D-201ENST00000309641 SOX30O94993 753 aa8.27□□□□□ -1.09
PDE4D-201ENST00000309641 PGM3O95394 542 aa8.27□□□□□ -1.09
PDE4D-201ENST00000309641 T-ENOLP0DO92 83 aa8.27□□□□□ -1.09
PDE4D-201ENST00000309641 HPGDP15428 266 aa8.27□□□□□ -1.09
PDE4D-201ENST00000309641 ENDOUP21128 410 aaKnown RBP8.27□□□□□ -1.09
PDE4D-201ENST00000309641 GDF1P27539 372 aa8.27□□□□□ -1.09
PDE4D-201ENST00000309641 AQP1P29972 269 aa8.27□□□□□ -1.09
PDE4D-201ENST00000309641 ANXA11P50995 505 aaKnown RBP8.27□□□□□ -1.09
PDE4D-201ENST00000309641 GTF3C1Q12789 2109 aa8.27□□□□□ -1.09
PDE4D-201ENST00000309641 TOMM20Q15388 145 aa8.27□□□□□ -1.09
PDE4D-201ENST00000309641 ZNF141Q15928 474 aa8.27□□□□□ -1.09
PDE4D-201ENST00000309641 EIPR1Q53HC9 387 aa8.27□□□□□ -1.09
PDE4D-201ENST00000309641 WIPI1Q5MNZ9 446 aaPredicted RBP8.27□□□□□ -1.09
PDE4D-201ENST00000309641 GCNT6Q5T4J0 391 aa8.27□□□□□ -1.09
PDE4D-201ENST00000309641 FAM91A1Q658Y4 838 aa8.27□□□□□ -1.09
PDE4D-201ENST00000309641 C8orf82Q6P1X6 216 aaPredicted RBP8.27□□□□□ -1.09
PDE4D-201ENST00000309641 ZNF605Q86T29 641 aa8.27□□□□□ -1.09
PDE4D-201ENST00000309641 SLC22A16Q86VW1 577 aa8.27□□□□□ -1.09
PDE4D-201ENST00000309641 VRK2Q86Y07 508 aa8.27□□□□□ -1.09
PDE4D-201ENST00000309641 SPPL2CQ8IUH8 684 aa8.27□□□□□ -1.09
PDE4D-201ENST00000309641 SLC15A3Q8IY34 581 aa8.27□□□□□ -1.09
PDE4D-201ENST00000309641 FADS6Q8N9I5 356 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms