RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 C16orf89Q6UX73 402 aa16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 EIF3MQ7L2H7 374 aaKnown RBP16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 PLCZ1Q86YW0 608 aa16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 ZNF843Q8N446 348 aa16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 CISD2Q8N5K1 135 aaKnown RBP16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 HIPK4Q8NE63 616 aa16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 TOR1AIP2Q8NFQ8 470 aa16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 TNIP2Q8NFZ5 429 aa16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 CPT1CQ8TCG5 803 aa16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 NR4A3Q92570 626 aa16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 SNRNP40Q96DI7 357 aaKnown RBP16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 TMEM19Q96HH6 336 aa16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 TAAR6Q96RI8 345 aa16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 ZNF607Q96SK3 696 aa16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 SLC39A3Q9BRY0 314 aa16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 SLC38A1Q9H2H9 487 aa16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 IKZF5Q9H5V7 419 aa16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 TUBA8Q9NY65 449 aaPredicted RBP16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 MKLN1Q9UL63 735 aa16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 C15orf41Q9Y2V0 281 aa16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 DSPPQ9NZW4 1301 aa16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 AGAP5A6NIR3 686 aa16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 G3V3Y1 287 aa16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 SCO2O43819 266 aa16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 FCMRO60667 390 aa16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 SERPINB7O75635 380 aa16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 THBS1P07996 1170 aa16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 CHRM4P08173 479 aa16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 GCKP35557 465 aa16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 SUMO3P55854 103 aaPredicted RBP16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 PPIAP62937 165 aaKnown RBP16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 CHRNEQ04844 493 aa16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 SCARB2Q14108 478 aa16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 LARS2Q15031 903 aaKnown RBP16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 BICRALQ6AI39 1079 aa16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 C8orf82Q6P1X6 216 aaPredicted RBP16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 ZAR1Q86SH2 424 aa16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 GALNT10Q86SR1 603 aa16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 PGAM4Q8N0Y7 254 aa16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 ANKFN1Q8N957 763 aa16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 OR4K17Q8NGC6 315 aa16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 OR10A6Q8NH74 314 aa16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 JSRP1Q96MG2 331 aaPredicted RBP16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 ZNF703Q9H7S9 590 aaPredicted RBP16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 ZDHHC11Q9H8X9 412 aa16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 GALNT9Q9HCQ5 603 aa16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 ARL8BQ9NVJ2 186 aa16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 FBXO34Q9NWN3 711 aa16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 LUZP4Q9P127 313 aa16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 ZNF232Q9UNY5 417 aa16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 MRPS18CQ9Y3D5 142 aaKnown RBP16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 TNRC6AQ8NDV7 1962 aaKnown RBP16.35■□□□□ 0.21
SSSCA1-201ENST00000309328 SMG1Q96Q15 3661 aaKnown RBP16.34■□□□□ 0.21
SSSCA1-201ENST00000309328 A0A0G2JMM0 328 aa16.34■□□□□ 0.21
SSSCA1-201ENST00000309328 A0A1W2PPB8 328 aa16.34■□□□□ 0.21
SSSCA1-201ENST00000309328 A0A1W2PRS3 328 aa16.34■□□□□ 0.21
SSSCA1-201ENST00000309328 PRAMEF27A3QJZ7 478 aa16.34■□□□□ 0.21
SSSCA1-201ENST00000309328 PRORSD1PA6NEY8 169 aa16.34■□□□□ 0.21
SSSCA1-201ENST00000309328 SERINC4A6NH21 518 aa16.34■□□□□ 0.21
SSSCA1-201ENST00000309328 LRRC3CA6NJW4 275 aa16.34■□□□□ 0.21
SSSCA1-201ENST00000309328 KIR3DP1A8MWS1 328 aa16.34■□□□□ 0.21
SSSCA1-201ENST00000309328 EIF4E2O60573 245 aaKnown RBP16.34■□□□□ 0.21
SSSCA1-201ENST00000309328 UGT2B17O75795 530 aa16.34■□□□□ 0.21
SSSCA1-201ENST00000309328 EDN3P14138 238 aa16.34■□□□□ 0.21
SSSCA1-201ENST00000309328 IL7RP16871 459 aa16.34■□□□□ 0.21
SSSCA1-201ENST00000309328 RPS4Y1P22090 263 aaKnown RBP16.34■□□□□ 0.21
SSSCA1-201ENST00000309328 PCGF2P35227 344 aa16.34■□□□□ 0.21
SSSCA1-201ENST00000309328 MXRA7P84157 204 aa16.34■□□□□ 0.21
SSSCA1-201ENST00000309328 VEZF1Q14119 521 aa16.34■□□□□ 0.21
SSSCA1-201ENST00000309328 ADRM1Q16186 407 aa16.34■□□□□ 0.21
SSSCA1-201ENST00000309328 LIN52Q52LA3 116 aa16.34■□□□□ 0.21
SSSCA1-201ENST00000309328 RABL3Q5HYI8 236 aa16.34■□□□□ 0.21
SSSCA1-201ENST00000309328 PDZK1Q5T2W1 519 aa16.34■□□□□ 0.21
SSSCA1-201ENST00000309328 ZNF324BQ6AW86 544 aaPredicted RBP16.34■□□□□ 0.21
SSSCA1-201ENST00000309328 DESI1Q6ICB0 168 aa16.34■□□□□ 0.21
SSSCA1-201ENST00000309328 CALHM3Q86XJ0 350 aa16.34■□□□□ 0.21
SSSCA1-201ENST00000309328 ARHGAP24Q8N264 748 aa16.34■□□□□ 0.21
SSSCA1-201ENST00000309328 SLC35B4Q969S0 331 aa16.34■□□□□ 0.21
SSSCA1-201ENST00000309328 SLX1AQ9BQ83 275 aa16.34■□□□□ 0.21
SSSCA1-201ENST00000309328 EVA1AQ9H8M9 152 aa16.34■□□□□ 0.21
SSSCA1-201ENST00000309328 ACKR4Q9NPB9 350 aa16.34■□□□□ 0.21
SSSCA1-201ENST00000309328 ABCD2Q9UBJ2 740 aa16.34■□□□□ 0.21
SSSCA1-201ENST00000309328 A0A087WZY1 265 aa16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 FAM220BPB1ANY3 271 aa16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 FAM47E-STBD1D6RA91 191 aa16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 GTPBP1O00178 669 aaKnown RBP16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 HCN1O60741 890 aa16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 PGM3O95394 542 aa16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 C1QCP02747 245 aa16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 NUDT7P0C024 238 aa16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 UBL4AP11441 157 aa16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 NID1P14543 1247 aa16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 SRD5A2P31213 254 aa16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 DSCR4P56555 118 aaPredicted RBP16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 EEFSECP57772 596 aaKnown RBP16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 PSME3P61289 254 aa16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 SELPLGQ14242 412 aa16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 FGFBP1Q14512 234 aa16.33■□□□□ 0.2
SSSCA1-201ENST00000309328 SLC10A1Q14973 349 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms