RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 PMF1-BGLAPU3KQ54 211 aa10.56□□□□□ -0.72
SCG2-201ENST00000305409 PI4KAP42356 2102 aa10.56□□□□□ -0.72
SCG2-201ENST00000305409 CACNA1EQ15878 2313 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 LRRTM2O43300 516 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 AIREO43918 545 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 KIAA0513O60268 411 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 BRINP1O60477 761 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 CTNSO60931 367 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 OR2B3O76000 313 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 CLPXO76031 633 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 SLITRK5O94991 958 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 NID1P14543 1247 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 FOLR1P15328 257 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 CSF2RBP32927 897 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 OPRL1P41146 370 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 DHPSP49366 369 aaPredicted RBP10.55□□□□□ -0.72
SCG2-201ENST00000305409 ARL4DP49703 201 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 AFF3P51826 1226 aaKnown RBP10.55□□□□□ -0.72
SCG2-201ENST00000305409 TSTQ16762 297 aaKnown RBP10.55□□□□□ -0.72
SCG2-201ENST00000305409 SYT14P1Q58G82 188 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 DESI1Q6ICB0 168 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 SMARCD3Q6STE5 483 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 SHISA6Q6ZSJ9 500 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 C17orf82Q86X59 251 aaPredicted RBP10.55□□□□□ -0.72
SCG2-201ENST00000305409 OR8J1Q8NGP2 316 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 OR4Q3Q8NH05 313 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 GNPDA2Q8TDQ7 276 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 TSLPQ969D9 159 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 TRIM45Q9H8W5 580 aaPredicted RBP10.55□□□□□ -0.72
SCG2-201ENST00000305409 ATXN7L1Q9ULK2 861 aaPredicted RBP10.55□□□□□ -0.72
SCG2-201ENST00000305409 IGHV1OR21-1A0A087WYE8 117 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 CDHR4A6H8M9 788 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 FAM183AA6NL82 134 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 MAGEB3O15480 346 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 GMFGO60234 142 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 CNOT3O75175 753 aaKnown RBP10.55□□□□□ -0.72
SCG2-201ENST00000305409 NSA2O95478 260 aaKnown RBP10.55□□□□□ -0.72
SCG2-201ENST00000305409 DBTP11182 482 aaKnown RBP10.55□□□□□ -0.72
SCG2-201ENST00000305409 IFNA8P32881 189 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 MAP3K8P41279 467 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 SNRPGP62308 76 aaKnown RBP10.55□□□□□ -0.72
SCG2-201ENST00000305409 CDK5Q00535 292 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 CSTF1Q05048 431 aaKnown RBP10.55□□□□□ -0.72
SCG2-201ENST00000305409 COX10Q12887 443 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 EXOSC6Q5RKV6 272 aaKnown RBP10.55□□□□□ -0.72
SCG2-201ENST00000305409 SLC35F1Q5T1Q4 408 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 FCRLBQ6BAA4 426 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 DRAXINQ8NBI3 349 aaPredicted RBP10.55□□□□□ -0.72
SCG2-201ENST00000305409 C16orf52Q8NHV5 167 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 FAM174AQ8TBP5 190 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 ACOT11Q8WXI4 607 aaPredicted RBP10.55□□□□□ -0.72
SCG2-201ENST00000305409 SAMD8Q96LT4 415 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 ZNF582Q96NG8 517 aaPredicted RBP10.55□□□□□ -0.72
SCG2-201ENST00000305409 PRSS27Q9BQR3 290 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 NUDT22Q9BRQ3 303 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 CENPOQ9BU64 300 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 FLRT3Q9NZU0 649 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 CSNK1G3Q9Y6M4 447 aa10.55□□□□□ -0.72
SCG2-201ENST00000305409 EFCAB10A6NFE3 127 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 CLDN4O14493 209 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 MPZL2O60487 215 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 NKX2-2O95096 273 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 DBIP07108 87 aaKnown RBP10.54□□□□□ -0.72
SCG2-201ENST00000305409 MAKP20794 623 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 SLC15A1P46059 708 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 TSPAN31Q12999 210 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 IRF3Q14653 427 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 TBC1D25Q3MII6 688 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 VWA2Q5GFL6 755 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 SLC27A4Q6P1M0 643 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 OGFOD3Q6PK18 319 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 DEFB123Q8N688 67 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 BBS1Q8NFJ9 593 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 OR1L3Q8NH93 324 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 EFHD2Q96C19 240 aaPredicted RBP10.54□□□□□ -0.72
SCG2-201ENST00000305409 ZDHHC12Q96GR4 267 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 STACQ99469 402 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 MGLLQ99685 303 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 TBC1D23Q9NUY8 699 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 NLGN3Q9NZ94 848 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 OR10H1Q9Y4A9 318 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 CDC14CA4D256 554 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 SH3D21A4FU49 640 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 RFPL3O75679 317 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 GIMD1P0DJR0 217 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 SMSP52788 366 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 EFNA3P52797 238 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 CD300LDQ6UXZ3 194 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 MBOAT2Q6ZWT7 520 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 SLC46A3Q7Z3Q1 461 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 RANBP3LQ86VV4 465 aaPredicted RBP10.54□□□□□ -0.72
SCG2-201ENST00000305409 CADM2Q8N3J6 435 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 CAMKK1Q8N5S9 505 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 OR2I1PQ8NGU4 316 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 OR4C3Q8NH37 302 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 RELTQ969Z4 430 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 NACC2Q96BF6 587 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 ZHX1-C8orf76Q96EF9 292 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 VSTM2LQ96N03 204 aa10.54□□□□□ -0.72
SCG2-201ENST00000305409 MESP1Q9BRJ9 268 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms