RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 ARL5BQ96KC2 179 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 TREX2Q9BQ50 279 aaPredicted RBP7.33□□□□□ -1.24
SCN9A-201ENST00000303354 DMRT3Q9NQL9 472 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 EURLQ9NYK6 297 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 TFPTP0C1Z6 253 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 NR2C1P13056 603 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 FRKP42685 505 aaPredicted RBP7.33□□□□□ -1.24
SCN9A-201ENST00000303354 TPMTP51580 245 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 BMXP51813 675 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 GPR18Q14330 331 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 TYSND1Q2T9J0 566 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 ADIPOR2Q86V24 386 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 OR5D18Q8NGL1 313 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 LMO3Q8TAP4 145 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 SPTSSAQ969W0 71 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 RNF32Q9H0A6 362 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 ARNT2Q9HBZ2 717 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 CCDC59Q9P031 241 aaKnown RBP7.33□□□□□ -1.24
SCN9A-201ENST00000303354 M0R1B8 84 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 SOCS6O14544 535 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 ORC5O43913 435 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 C1orf105O95561 183 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 RPS17P08708 135 aaKnown RBP7.33□□□□□ -1.24
SCN9A-201ENST00000303354 GNAO1P09471 354 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 SSTR4P31391 388 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 RPA4Q13156 261 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 CLEC14AQ86T13 490 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 NATD1Q8N6N6 113 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 RSC1A1Q92681 617 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 TLCD1Q96CP7 247 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 STYXL1Q9Y6J8 313 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 IFT172Q9UG01 1749 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 C4orf47A7E2U8 309 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 FESP07332 822 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 POU3F1Q03052 451 aaPredicted RBP7.33□□□□□ -1.24
SCN9A-201ENST00000303354 SF3A2Q15428 464 aaKnown RBP7.33□□□□□ -1.24
SCN9A-201ENST00000303354 SLC14A2Q15849 920 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 KIAA1614Q5VZ46 1190 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 SHQ1Q6PI26 577 aaKnown RBP7.33□□□□□ -1.24
SCN9A-201ENST00000303354 NEIL3Q8TAT5 605 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 HES7Q9BYE0 225 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 SACM1LQ9NTJ5 587 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 GFOD1Q9NXC2 390 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 EFNA3P52797 238 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 MRPS21P82921 87 aaKnown RBP7.33□□□□□ -1.24
SCN9A-201ENST00000303354 CEACAM7Q14002 265 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 NIPAL1Q6NVV3 410 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 DHRS13Q6UX07 377 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 TECPR1Q7Z6L1 1165 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 LINC00346Q8IVM7 164 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 MOAP1Q96BY2 351 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 EGLN2Q96KS0 407 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 CBLCQ9ULV8 474 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 SDHDO14521 159 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 NCR1O76036 304 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 ATF4P18848 351 aaPredicted RBP7.33□□□□□ -1.24
SCN9A-201ENST00000303354 DCTP40126 519 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 VMACQ2NL98 169 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 SLC46A3Q7Z3Q1 461 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 DGCR14Q96DF8 476 aaKnown RBP7.33□□□□□ -1.24
SCN9A-201ENST00000303354 ASB9Q96DX5 294 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 ULBP2Q9BZM5 246 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 PEX16Q9Y5Y5 336 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 A0A1B0GTW7 788 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 ARL6IP5O75915 188 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 IDUAP35475 653 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 FAPQ12884 760 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 CCSMST1Q4G0I0 132 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 VWA2Q5GFL6 755 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 LCN10Q6JVE6 187 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 PAMR1Q6UXH9 720 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 UNC5DQ6UXZ4 953 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 SLC16A14Q7RTX9 510 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 PDZD3Q86UT5 571 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 OR7G3Q8NG95 312 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 OR8J1Q8NGP2 316 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 THRSPQ92748 146 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 WBP2Q969T9 261 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 C16orf58Q96GQ5 468 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 NTMT1Q9BV86 223 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 ZBP1Q9H171 429 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 GCM1Q9NP62 436 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 COPZ2Q9P299 210 aa7.33□□□□□ -1.24
SCN9A-201ENST00000303354 SERTM1A2A2V5 107 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 MROH6A6NGR9 719 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 SUSD5O60279 629 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 HMGN2P05204 90 aaKnown RBP7.32□□□□□ -1.24
SCN9A-201ENST00000303354 GSTM2P28161 218 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 HADHBP55084 474 aaKnown RBP7.32□□□□□ -1.24
SCN9A-201ENST00000303354 NADK2Q4G0N4 442 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 NHSL2Q5HYW2 709 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 C6orf183Q5T699 404 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 C3P1Q6ZMU1 363 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 SLC35D2Q76EJ3 337 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 CD163Q86VB7 1156 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 OR2A12Q8NGT7 310 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 FGF14Q92915 247 aa7.32□□□□□ -1.24
SCN9A-201ENST00000303354 MTHFD2LQ9H903 347 aaPredicted RBP7.32□□□□□ -1.24
SCN9A-201ENST00000303354 HTRA2O43464 458 aaPredicted RBP7.32□□□□□ -1.24
SCN9A-201ENST00000303354 ZNF780AO75290 641 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms