RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 RUNX2Q13950 521 aa12.03□□□□□ -0.48
HIF3A-204ENST00000300862 SLC35F1Q5T1Q4 408 aa12.03□□□□□ -0.48
HIF3A-204ENST00000300862 AADACL4Q5VUY2 407 aa12.03□□□□□ -0.48
HIF3A-204ENST00000300862 QSOX2Q6ZRP7 698 aa12.03□□□□□ -0.48
HIF3A-204ENST00000300862 MRGPREQ86SM8 312 aa12.03□□□□□ -0.48
HIF3A-204ENST00000300862 ASPGQ86U10 573 aa12.03□□□□□ -0.48
HIF3A-204ENST00000300862 LRRC25Q8N386 305 aaPredicted RBP12.03□□□□□ -0.48
HIF3A-204ENST00000300862 MSLNLQ96KJ4 702 aa12.03□□□□□ -0.48
HIF3A-204ENST00000300862 RIPOR3Q96MK2 946 aa12.03□□□□□ -0.48
HIF3A-204ENST00000300862 OR2M4Q96R27 311 aa12.03□□□□□ -0.48
HIF3A-204ENST00000300862 TBX5Q99593 518 aa12.03□□□□□ -0.48
HIF3A-204ENST00000300862 ENKD1Q9H0I2 346 aa12.03□□□□□ -0.48
HIF3A-204ENST00000300862 SRMSQ9H3Y6 488 aa12.03□□□□□ -0.48
HIF3A-204ENST00000300862 TRPV4Q9HBA0 871 aa12.03□□□□□ -0.48
HIF3A-204ENST00000300862 ADAP2Q9NPF8 381 aa12.03□□□□□ -0.48
HIF3A-204ENST00000300862 MRPS18AQ9NVS2 196 aaKnown RBP12.03□□□□□ -0.48
HIF3A-204ENST00000300862 FBXO34Q9NWN3 711 aa12.03□□□□□ -0.48
HIF3A-204ENST00000300862 ZNF443Q9Y2A4 671 aaPredicted RBP12.03□□□□□ -0.48
HIF3A-204ENST00000300862 COLEC10Q9Y6Z7 277 aa12.03□□□□□ -0.48
HIF3A-204ENST00000300862 SLC35F4A4IF30 521 aa12.02□□□□□ -0.48
HIF3A-204ENST00000300862 CD8B2A6NJW9 211 aa12.02□□□□□ -0.48
HIF3A-204ENST00000300862 SNTNA6NMZ2 147 aa12.02□□□□□ -0.48
HIF3A-204ENST00000300862 LINC01565O15544 149 aa12.02□□□□□ -0.48
HIF3A-204ENST00000300862 PLRG1O43660 514 aaKnown RBP12.02□□□□□ -0.48
HIF3A-204ENST00000300862 CD8BP10966 210 aa12.02□□□□□ -0.48
HIF3A-204ENST00000300862 APEX1P27695 318 aaKnown RBP12.02□□□□□ -0.48
HIF3A-204ENST00000300862 P2RX3P56373 397 aa12.02□□□□□ -0.48
HIF3A-204ENST00000300862 MAPK14Q16539 360 aa12.02□□□□□ -0.48
HIF3A-204ENST00000300862 TMEM196Q5HYL7 178 aa12.02□□□□□ -0.48
HIF3A-204ENST00000300862 PDZK1Q5T2W1 519 aa12.02□□□□□ -0.48
HIF3A-204ENST00000300862 FBXO46Q6PJ61 603 aaPredicted RBP12.02□□□□□ -0.48
HIF3A-204ENST00000300862 ZNF836Q6ZNA1 936 aa12.02□□□□□ -0.48
HIF3A-204ENST00000300862 PRSS41Q7RTY9 318 aa12.02□□□□□ -0.48
HIF3A-204ENST00000300862 CPOQ8IVL8 374 aa12.02□□□□□ -0.48
HIF3A-204ENST00000300862 CLDN22Q8N7P3 220 aa12.02□□□□□ -0.48
HIF3A-204ENST00000300862 ZNF485Q8NCK3 441 aa12.02□□□□□ -0.48
HIF3A-204ENST00000300862 ATP6V1C2Q8NEY4 427 aa12.02□□□□□ -0.48
HIF3A-204ENST00000300862 SPRYD4Q8WW59 207 aaPredicted RBP12.02□□□□□ -0.48
HIF3A-204ENST00000300862 SECISBP2Q96T21 854 aaKnown RBP12.02□□□□□ -0.48
HIF3A-204ENST00000300862 C11orf54Q9H0W9 315 aaPredicted RBP12.02□□□□□ -0.48
HIF3A-204ENST00000300862 HINT3Q9NQE9 182 aaKnown RBP12.02□□□□□ -0.48
HIF3A-204ENST00000300862 MRPS2Q9Y399 296 aaKnown RBP12.02□□□□□ -0.48
HIF3A-204ENST00000300862 SPEGQ15772 3267 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 LOC105369274A0A096LPK9 316 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 LOC102723532A0A0G2JNH3 316 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 STK25O00506 426 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 LDB3O75112 727 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 COL9A1P20849 921 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 PRKAR1BP31321 381 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 IFNA8P32881 189 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 PBX2P40425 430 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 ACTR1BP42025 376 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 ACTR1AP61163 376 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 CD83Q01151 205 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 ZNF155Q12901 538 aaPredicted RBP12.02□□□□□ -0.49
HIF3A-204ENST00000300862 PGGHGQ32M88 737 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 ITPRIPL2Q3MIP1 535 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 DDI2Q5TDH0 399 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 PRAMEF8Q5VWM4 474 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 PRAMEF7Q5VXH5 474 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 FAAH2Q6GMR7 532 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 SIGIRRQ6IA17 410 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 ZNF620Q6ZNG0 422 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 OR4N4Q8N0Y3 316 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 OR51G2Q8NGK0 314 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 GRPEL2Q8TAA5 225 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 OSTF1Q92882 214 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 SARGQ9BW04 601 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 DPH1Q9BZG8 443 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 TMEM168Q9H0V1 697 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 ISG20L2Q9H9L3 353 aaKnown RBP12.02□□□□□ -0.49
HIF3A-204ENST00000300862 CAPN10Q9HC96 672 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 RPRD1BQ9NQG5 326 aaKnown RBP12.02□□□□□ -0.49
HIF3A-204ENST00000300862 OBP2AQ9NY56 170 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 IL20Q9NYY1 176 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 KCMF1Q9P0J7 381 aa12.02□□□□□ -0.49
HIF3A-204ENST00000300862 EXOSC1Q9Y3B2 195 aaKnown RBP12.02□□□□□ -0.49
HIF3A-204ENST00000300862 GSAPA4D1B5 854 aa12.01□□□□□ -0.49
HIF3A-204ENST00000300862 FAM25AB3EWG3 89 aa12.01□□□□□ -0.49
HIF3A-204ENST00000300862 FAM25CB3EWG5 89 aa12.01□□□□□ -0.49
HIF3A-204ENST00000300862 FAM25GB3EWG6 89 aa12.01□□□□□ -0.49
HIF3A-204ENST00000300862 B4DXG7 233 aa12.01□□□□□ -0.49
HIF3A-204ENST00000300862 HPGDSO60760 199 aa12.01□□□□□ -0.49
HIF3A-204ENST00000300862 PVRP15151 417 aa12.01□□□□□ -0.49
HIF3A-204ENST00000300862 POLR2CP19387 275 aaPredicted RBP12.01□□□□□ -0.49
HIF3A-204ENST00000300862 EN2P19622 333 aaPredicted RBP12.01□□□□□ -0.49
HIF3A-204ENST00000300862 FPR3P25089 353 aa12.01□□□□□ -0.49
HIF3A-204ENST00000300862 TEAD1P28347 426 aa12.01□□□□□ -0.49
HIF3A-204ENST00000300862 GABRA5P31644 462 aa12.01□□□□□ -0.49
HIF3A-204ENST00000300862 GCGRP47871 477 aa12.01□□□□□ -0.49
HIF3A-204ENST00000300862 TFF2Q03403 129 aa12.01□□□□□ -0.49
HIF3A-204ENST00000300862 SCN1BQ07699 218 aa12.01□□□□□ -0.49
HIF3A-204ENST00000300862 RGS1Q08116 209 aa12.01□□□□□ -0.49
HIF3A-204ENST00000300862 ASAH1Q13510 395 aa12.01□□□□□ -0.49
HIF3A-204ENST00000300862 CEBPEQ15744 281 aa12.01□□□□□ -0.49
HIF3A-204ENST00000300862 DECR1Q16698 335 aa12.01□□□□□ -0.49
HIF3A-204ENST00000300862 CEP78Q5JTW2 689 aa12.01□□□□□ -0.49
HIF3A-204ENST00000300862 C9orf50Q5SZB4 431 aa12.01□□□□□ -0.49
HIF3A-204ENST00000300862 PLBD1Q6P4A8 553 aa12.01□□□□□ -0.49
HIF3A-204ENST00000300862 WDR88Q6ZMY6 472 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms