RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 MSL3P1P0C860 447 aa10.94□□□□□ -0.66
RHO-201ENST00000296271 TLX1P31314 330 aaPredicted RBP10.94□□□□□ -0.66
RHO-201ENST00000296271 S100A5P33763 92 aa10.94□□□□□ -0.66
RHO-201ENST00000296271 BTG2P78543 158 aa10.94□□□□□ -0.66
RHO-201ENST00000296271 FAM53BQ14153 422 aa10.94□□□□□ -0.66
RHO-201ENST00000296271 RASSF6Q6ZTQ3 369 aa10.94□□□□□ -0.66
RHO-201ENST00000296271 ABHD13Q7L211 337 aa10.94□□□□□ -0.66
RHO-201ENST00000296271 CPOQ8IVL8 374 aa10.94□□□□□ -0.66
RHO-201ENST00000296271 COX18Q8N8Q8 333 aa10.94□□□□□ -0.66
RHO-201ENST00000296271 CNOT9Q92600 299 aaKnown RBP10.94□□□□□ -0.66
RHO-201ENST00000296271 NELL2Q99435 816 aa10.94□□□□□ -0.66
RHO-201ENST00000296271 TWSG1Q9GZX9 223 aa10.94□□□□□ -0.66
RHO-201ENST00000296271 NDUFB11Q9NX14 153 aa10.94□□□□□ -0.66
RHO-201ENST00000296271 KLHL28Q9NXS3 571 aa10.94□□□□□ -0.66
RHO-201ENST00000296271 NTMQ9P121 344 aa10.94□□□□□ -0.66
RHO-201ENST00000296271 FBXL4Q9UKA2 621 aa10.94□□□□□ -0.66
RHO-201ENST00000296271 PCDHGB6Q9Y5F9 930 aa10.94□□□□□ -0.66
RHO-201ENST00000296271 TRAV27A0A087WT01 109 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 A8MU76 341 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 KLF4O43474 513 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 GPR75O95800 540 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 DLGAP3O95886 979 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 CLUP10909 449 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 IGFBP4P22692 258 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 PSMA1P25786 263 aaKnown RBP10.93□□□□□ -0.66
RHO-201ENST00000296271 SDC2P34741 201 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 EMDP50402 254 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 CDH11P55287 796 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 GAS6Q14393 721 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 OR1Q1Q15612 314 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 SLC36A4Q6YBV0 504 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 ZNF620Q6ZNG0 422 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 ABI3BPQ7Z7G0 1075 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 EGFL6Q8IUX8 553 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 SIRT6Q8N6T7 355 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 OR52R1Q8NGF1 315 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 ASB15Q8WXK1 588 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 HPS1Q92902 700 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 C1GALT1C1Q96EU7 318 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 ZNF350Q9GZX5 532 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 PIGUQ9H490 435 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 A0A0J9YY10 115 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 SPTY2D1-AS1A0A0U1RR47 76 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 SHISA3A0PJX4 238 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 DUXAA6NLW8 204 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 PRODHO43272 600 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 HRO43593 1189 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 CBX7O95931 251 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 CTSEP14091 401 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 GCGRP47871 477 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 ARFIP1P53367 373 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 FABP5Q01469 135 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 EOGTQ5NDL2 527 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 PLBD1Q6P4A8 553 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 MBOAT2Q6ZWT7 520 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 CCDC190Q86UF4 302 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 CELF2-AS1Q8N7Q2 184 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 OR13C2Q8NGS9 318 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 OR51A7Q8NH64 312 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 PEX11GQ96HA9 241 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 CCDC3Q9BQI4 270 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 TTTY10Q9BZA0 68 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 TRIM45Q9H8W5 580 aaPredicted RBP10.93□□□□□ -0.66
RHO-201ENST00000296271 ISG20L2Q9H9L3 353 aaKnown RBP10.93□□□□□ -0.66
RHO-201ENST00000296271 FBRSQ9HAH7 460 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 SMURF1Q9HCE7 757 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 STUB1Q9UNE7 303 aa10.93□□□□□ -0.66
RHO-201ENST00000296271 HYKKA2RU49 373 aa10.92□□□□□ -0.66
RHO-201ENST00000296271 LRRN3E7EW58 273 aa10.92□□□□□ -0.66
RHO-201ENST00000296271 CHST10O43529 356 aa10.92□□□□□ -0.66
RHO-201ENST00000296271 LYPD3O95274 346 aa10.92□□□□□ -0.66
RHO-201ENST00000296271 ALOX5P09917 674 aa10.92□□□□□ -0.66
RHO-201ENST00000296271 IFI30P13284 250 aa10.92□□□□□ -0.66
RHO-201ENST00000296271 GSTM3P21266 225 aa10.92□□□□□ -0.66
RHO-201ENST00000296271 CD97P48960 835 aa10.92□□□□□ -0.66
RHO-201ENST00000296271 PPM1FP49593 454 aaPredicted RBP10.92□□□□□ -0.66
RHO-201ENST00000296271 MLLT11Q13015 90 aaPredicted RBP10.92□□□□□ -0.66
RHO-201ENST00000296271 HNRNPA0Q13151 305 aaKnown RBP10.92□□□□□ -0.66
RHO-201ENST00000296271 FZD5Q13467 585 aa10.92□□□□□ -0.66
RHO-201ENST00000296271 LARS2Q15031 903 aaKnown RBP10.92□□□□□ -0.66
RHO-201ENST00000296271 DECR1Q16698 335 aa10.92□□□□□ -0.66
RHO-201ENST00000296271 NDUFA9Q16795 377 aa10.92□□□□□ -0.66
RHO-201ENST00000296271 LRIT3Q3SXY7 679 aa10.92□□□□□ -0.66
RHO-201ENST00000296271 PDZK1Q5T2W1 519 aa10.92□□□□□ -0.66
RHO-201ENST00000296271 AADACL4Q5VUY2 407 aa10.92□□□□□ -0.66
RHO-201ENST00000296271 PRAMEF8Q5VWM4 474 aa10.92□□□□□ -0.66
RHO-201ENST00000296271 PRAMEF7Q5VXH5 474 aa10.92□□□□□ -0.66
RHO-201ENST00000296271 DESI1Q6ICB0 168 aa10.92□□□□□ -0.66
RHO-201ENST00000296271 LINC00299Q6ZSB3 139 aa10.92□□□□□ -0.66
RHO-201ENST00000296271 GDPD3Q7L5L3 318 aa10.92□□□□□ -0.66
RHO-201ENST00000296271 GHDCQ8N2G8 530 aa10.92□□□□□ -0.66
RHO-201ENST00000296271 LMF1Q96S06 567 aa10.92□□□□□ -0.66
RHO-201ENST00000296271 ZNF649Q9BS31 505 aa10.92□□□□□ -0.66
RHO-201ENST00000296271 LRRC61Q9BV99 259 aa10.92□□□□□ -0.66
RHO-201ENST00000296271 TMED9Q9BVK6 235 aa10.92□□□□□ -0.66
RHO-201ENST00000296271 HDHD5Q9BXW7 423 aa10.92□□□□□ -0.66
RHO-201ENST00000296271 UBQLN3Q9H347 655 aa10.92□□□□□ -0.66
RHO-201ENST00000296271 LRRN3Q9H3W5 708 aa10.92□□□□□ -0.66
RHO-201ENST00000296271 ZNF576Q9H609 170 aa10.92□□□□□ -0.66
RHO-201ENST00000296271 TBC1D17Q9HA65 648 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms