RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 RAET1LQ5VY80 246 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 ELP2Q6IA86 826 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 NAXEQ8NCW5 288 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 ZNF740Q8NDX6 193 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 OR56A1Q8NGH5 318 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 CASTOR1Q8WTX7 329 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 RTP3Q9BQQ7 232 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 ZNF471Q9BX82 626 aaPredicted RBP12.65□□□□□ -0.38
HPS3-201ENST00000296051 SLC6A17Q9H1V8 727 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 TAS2R3Q9NYW6 316 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 NDUFAF4Q9P032 175 aa12.65□□□□□ -0.38
HPS3-201ENST00000296051 WASHC1A8K0Z3 465 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 SSX4O60224 188 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 GPR37L1O60883 481 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 F11P03951 625 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 LHCGRP22888 699 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 RPL35P42766 123 aaKnown RBP12.64□□□□□ -0.39
HPS3-201ENST00000296051 BTN1A1Q13410 526 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 SYPL1Q16563 259 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 LRRN1Q6UXK5 716 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 SLC7A6Q92536 515 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 THAP7Q9BT49 309 aaPredicted RBP12.64□□□□□ -0.39
HPS3-201ENST00000296051 DUSP23Q9BVJ7 150 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 TREM1Q9NP99 234 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 CD93Q9NPY3 652 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 PRDM9Q9NQV7 894 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 FBXO8Q9NRD0 319 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 ZNF225Q9UK10 706 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 PLEKHA6Q9Y2H5 1048 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 PTRH2Q9Y3E5 179 aaKnown RBP12.64□□□□□ -0.39
HPS3-201ENST00000296051 DRGXA6NNA5 263 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 SYNGR4O95473 234 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 GYPBP06028 91 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 CTSCP53634 463 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 RPS25P62851 125 aaKnown RBP12.64□□□□□ -0.39
HPS3-201ENST00000296051 PON3Q15166 354 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 TCTE1Q5JU00 501 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 PRAMEF17Q5VTA0 474 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 PAQR7Q86WK9 346 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 KIF18BQ86Y91 864 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 VRK3Q8IV63 474 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 MAP3K3Q99759 626 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 QRSL1Q9H0R6 528 aaKnown RBP12.64□□□□□ -0.39
HPS3-201ENST00000296051 AK6Q9Y3D8 172 aaKnown RBP12.64□□□□□ -0.39
HPS3-201ENST00000296051 SCN7AQ01118 1682 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 SERPINA3P01011 423 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 PVRP15151 417 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 PRKACAP17612 351 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 AHRP35869 848 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 GIPRP48546 466 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 CHAF1BQ13112 559 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 LILRA3Q8N6C8 439 aaPredicted RBP12.64□□□□□ -0.39
HPS3-201ENST00000296051 OR52E4Q8NGH9 312 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 TRMT10AQ8TBZ6 339 aaKnown RBP12.64□□□□□ -0.39
HPS3-201ENST00000296051 SPRYD4Q8WW59 207 aaPredicted RBP12.64□□□□□ -0.39
HPS3-201ENST00000296051 TESCQ96BS2 214 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 LRRC46Q96FV0 321 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 SAMD8Q96LT4 415 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 EGLN3Q9H6Z9 239 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 SNX11Q9Y5W9 270 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 C13orf42A0A1B0GVH6 325 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 NPIPA5E9PKD4 350 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 SLC19A2O60779 497 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 RFPL3O75679 317 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 ALDOBP05062 364 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 TIMP2P16035 220 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 OR3A3P47888 321 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 KCNC3Q14003 757 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 RAB12Q6IQ22 244 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 GDPGP1Q6ZNW5 385 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 SLC44A3Q8N4M1 653 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 DHRS1Q96LJ7 313 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 LYARQ9NX58 379 aaKnown RBP12.64□□□□□ -0.39
HPS3-201ENST00000296051 NPIPA1Q9UND3 350 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 RASD1Q9Y272 281 aa12.64□□□□□ -0.39
HPS3-201ENST00000296051 NOP16Q9Y3C1 178 aaKnown RBP12.64□□□□□ -0.39
HPS3-201ENST00000296051 TNRC6CQ9HCJ0 1690 aaKnown RBP12.63□□□□□ -0.39
HPS3-201ENST00000296051 SLC9B1P1A6NJY1 282 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 AKR7A2O43488 359 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 GPX5O75715 221 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 RCBTB2O95199 551 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 P04436 131 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 EMP2P54851 167 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 FAPQ12884 760 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 IRF4Q15306 451 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 HES5Q5TA89 166 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 NXNL2Q5VZ03 156 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 GLCCI1Q86VQ1 547 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 ZNF615Q8N8J6 731 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 POGLUT1Q8NBL1 392 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 GNPDA2Q8TDQ7 276 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 CREB3L1Q96BA8 519 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 ADAD1Q96M93 576 aaKnown RBP12.63□□□□□ -0.39
HPS3-201ENST00000296051 ZFYVE21Q9BQ24 234 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 HOXD1Q9GZZ0 328 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 DDX31Q9H8H2 851 aaKnown RBP12.63□□□□□ -0.39
HPS3-201ENST00000296051 STARD5Q9NSY2 213 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 TXNL4BQ9NX01 149 aaKnown RBP12.63□□□□□ -0.39
HPS3-201ENST00000296051 MUTYHQ9UIF7 546 aa12.63□□□□□ -0.39
HPS3-201ENST00000296051 KLK4Q9Y5K2 254 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms