RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 HNRNPCL3B7ZW38 293 aa13.91□□□□□ -0.18
CCDC140-201ENST00000295226 KIAA0513O60268 411 aa13.91□□□□□ -0.18
CCDC140-201ENST00000295226 UGT2B17O75795 530 aa13.91□□□□□ -0.18
CCDC140-201ENST00000295226 HNRNPCL4P0DMR1 293 aa13.91□□□□□ -0.18
CCDC140-201ENST00000295226 ATP6V1B2P21281 511 aa13.91□□□□□ -0.18
CCDC140-201ENST00000295226 KDELR2P33947 212 aa13.91□□□□□ -0.18
CCDC140-201ENST00000295226 CD96P40200 585 aa13.91□□□□□ -0.18
CCDC140-201ENST00000295226 PNLIPRP2P54317 469 aa13.91□□□□□ -0.18
CCDC140-201ENST00000295226 UCNP55089 124 aa13.91□□□□□ -0.18
CCDC140-201ENST00000295226 OC90Q02509 493 aaPredicted RBP13.91□□□□□ -0.18
CCDC140-201ENST00000295226 VEZF1Q14119 521 aa13.91□□□□□ -0.18
CCDC140-201ENST00000295226 GNA13Q14344 377 aa13.91□□□□□ -0.18
CCDC140-201ENST00000295226 MTX3Q5HYI7 312 aa13.91□□□□□ -0.18
CCDC140-201ENST00000295226 PDZK1Q5T2W1 519 aa13.91□□□□□ -0.18
CCDC140-201ENST00000295226 SPINK14Q6IE38 97 aa13.91□□□□□ -0.18
CCDC140-201ENST00000295226 OPN5Q6U736 354 aa13.91□□□□□ -0.18
CCDC140-201ENST00000295226 ISLR2Q6UXK2 745 aa13.91□□□□□ -0.18
CCDC140-201ENST00000295226 APOOLQ6UXV4 268 aa13.91□□□□□ -0.18
CCDC140-201ENST00000295226 MDGA2Q7Z553 956 aa13.91□□□□□ -0.18
CCDC140-201ENST00000295226 ZNF619Q8N2I2 560 aa13.91□□□□□ -0.18
CCDC140-201ENST00000295226 PACRGLQ8N7B6 248 aa13.91□□□□□ -0.18
CCDC140-201ENST00000295226 ZNF614Q8N883 585 aa13.91□□□□□ -0.18
CCDC140-201ENST00000295226 GATSQ8NAP1 163 aa13.91□□□□□ -0.18
CCDC140-201ENST00000295226 HGDQ93099 445 aa13.91□□□□□ -0.18
CCDC140-201ENST00000295226 EME1Q96AY2 570 aa13.91□□□□□ -0.18
CCDC140-201ENST00000295226 TAMM41Q96BW9 452 aa13.91□□□□□ -0.18
CCDC140-201ENST00000295226 SAP130Q9H0E3 1048 aa13.91□□□□□ -0.18
CCDC140-201ENST00000295226 MTHFD2LQ9H903 347 aaPredicted RBP13.91□□□□□ -0.18
CCDC140-201ENST00000295226 BCL2L10Q9HD36 194 aa13.91□□□□□ -0.18
CCDC140-201ENST00000295226 HPF1Q9NWY4 346 aa13.91□□□□□ -0.18
CCDC140-201ENST00000295226 MAGEL2Q9UJ55 1249 aa13.91□□□□□ -0.18
CCDC140-201ENST00000295226 MRTO4Q9UKD2 239 aaKnown RBP13.91□□□□□ -0.18
CCDC140-201ENST00000295226 V9GYQ6 96 aa13.91□□□□□ -0.18
CCDC140-201ENST00000295226 ATMQ13315 3056 aa13.9□□□□□ -0.18
CCDC140-201ENST00000295226 CACNA1GO43497 2377 aa13.9□□□□□ -0.18
CCDC140-201ENST00000295226 OR6C70A6NIJ9 312 aa13.9□□□□□ -0.18
CCDC140-201ENST00000295226 G3V3Y1 287 aa13.9□□□□□ -0.18
CCDC140-201ENST00000295226 TPST1O60507 370 aa13.9□□□□□ -0.18
CCDC140-201ENST00000295226 CEACAM4O75871 244 aa13.9□□□□□ -0.18
CCDC140-201ENST00000295226 HOXB6P17509 224 aaKnown RBP13.9□□□□□ -0.18
CCDC140-201ENST00000295226 DCTP40126 519 aa13.9□□□□□ -0.18
CCDC140-201ENST00000295226 TUBA3CQ13748 450 aa13.9□□□□□ -0.18
CCDC140-201ENST00000295226 NTRK2Q16620 822 aa13.9□□□□□ -0.18
CCDC140-201ENST00000295226 TUBA3EQ6PEY2 450 aa13.9□□□□□ -0.18
CCDC140-201ENST00000295226 BORAQ6PGQ7 559 aa13.9□□□□□ -0.18
CCDC140-201ENST00000295226 C19orf48Q6RUI8 117 aa13.9□□□□□ -0.18
CCDC140-201ENST00000295226 ZNF227Q86WZ6 799 aa13.9□□□□□ -0.18
CCDC140-201ENST00000295226 BBS10Q8TAM1 723 aa13.9□□□□□ -0.18
CCDC140-201ENST00000295226 ARSGQ96EG1 525 aa13.9□□□□□ -0.18
CCDC140-201ENST00000295226 SIGLEC12Q96PQ1 595 aa13.9□□□□□ -0.18
CCDC140-201ENST00000295226 CALML5Q9NZT1 146 aa13.9□□□□□ -0.18
CCDC140-201ENST00000295226 CSAG2Q9Y5P2 127 aa13.9□□□□□ -0.18
CCDC140-201ENST00000295226 GPC6Q9Y625 555 aaPredicted RBP13.9□□□□□ -0.18
CCDC140-201ENST00000295226 MAP1BP46821 2468 aaKnown RBP13.9□□□□□ -0.18
CCDC140-201ENST00000295226 DSPPQ9NZW4 1301 aa13.9□□□□□ -0.19
CCDC140-201ENST00000295226 NPIPB9F8W1W9 429 aa13.89□□□□□ -0.19
CCDC140-201ENST00000295226 K7EM74 188 aa13.89□□□□□ -0.19
CCDC140-201ENST00000295226 BCAS1O75363 584 aaPredicted RBP13.89□□□□□ -0.19
CCDC140-201ENST00000295226 GMNNO75496 209 aa13.89□□□□□ -0.19
CCDC140-201ENST00000295226 MFN2O95140 757 aa13.89□□□□□ -0.19
CCDC140-201ENST00000295226 OXSR1O95747 527 aaPredicted RBP13.89□□□□□ -0.19
CCDC140-201ENST00000295226 SERPINA1P01009 418 aa13.89□□□□□ -0.19
CCDC140-201ENST00000295226 CCL3P10147 92 aa13.89□□□□□ -0.19
CCDC140-201ENST00000295226 HLCSP50747 726 aa13.89□□□□□ -0.19
CCDC140-201ENST00000295226 ATP12AP54707 1039 aa13.89□□□□□ -0.19
CCDC140-201ENST00000295226 PSMD4P55036 377 aaKnown RBP13.89□□□□□ -0.19
CCDC140-201ENST00000295226 PDK3Q15120 406 aa13.89□□□□□ -0.19
CCDC140-201ENST00000295226 NDUFAF6Q330K2 333 aa13.89□□□□□ -0.19
CCDC140-201ENST00000295226 INTS11Q5TA45 600 aaKnown RBP13.89□□□□□ -0.19
CCDC140-201ENST00000295226 CCDC80Q76M96 950 aa13.89□□□□□ -0.19
CCDC140-201ENST00000295226 MARCH3Q86UD3 253 aa13.89□□□□□ -0.19
CCDC140-201ENST00000295226 COMTD1Q86VU5 262 aa13.89□□□□□ -0.19
CCDC140-201ENST00000295226 CYP4Z2PQ8N1L4 340 aa13.89□□□□□ -0.19
CCDC140-201ENST00000295226 METTL25Q8N6Q8 603 aa13.89□□□□□ -0.19
CCDC140-201ENST00000295226 OR52P1PQ8NH57 321 aa13.89□□□□□ -0.19
CCDC140-201ENST00000295226 GRHL3Q8TE85 626 aa13.89□□□□□ -0.19
CCDC140-201ENST00000295226 SLCO4A1Q96BD0 722 aa13.89□□□□□ -0.19
CCDC140-201ENST00000295226 FAM192AQ9GZU8 254 aa13.89□□□□□ -0.19
CCDC140-201ENST00000295226 RLIMQ9NVW2 624 aa13.89□□□□□ -0.19
CCDC140-201ENST00000295226 AGAP5A6NIR3 686 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 TMEM229AB2RXF0 380 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 SCO2O43819 266 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 HS6ST1O60243 411 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 ZNF682O95780 498 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 NAGAP17050 411 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 FASP25445 335 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 CYB561P49447 251 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 CHN2P52757 468 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 POLE2P56282 527 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 MFAP5Q13361 173 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 DUSP7Q16829 419 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 CYBRD1Q53TN4 286 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 TBCELQ5QJ74 424 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 PRAMEF20Q5VT98 475 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 PRAMEF8Q5VWM4 474 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 PRAMEF7Q5VXH5 474 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 NUP54Q7Z3B4 507 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 ARMC8Q8IUR7 673 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 SLC30A8Q8IWU4 369 aa13.88□□□□□ -0.19
CCDC140-201ENST00000295226 PEX5LQ8IYB4 626 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms