RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 TBPP20226 339 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 TAS2R30P59541 319 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 ACTA2P62736 377 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 ACTG2P63267 376 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 CCNJQ5T5M9 372 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 IER5LQ5T953 404 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 SNAPC3Q92966 411 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 TRMT61AQ96FX7 289 aaKnown RBP11.76□□□□□ -0.53
SLX4-201ENST00000294008 SLC25A18Q9H1K4 315 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 TM7SF3Q9NS93 570 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 TRGV8A0A0C4DH27 118 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 H3BNX3 289 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 K7EQM0 130 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 SPATA31C1P0DKV0 1188 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 IMPDH1P20839 514 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 GABRA5P31644 462 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 DIO3P55073 304 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 GPR50Q13585 617 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 DCAF12Q5T6F0 453 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 FAM57BQ71RH2 274 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 KRTCAP2Q8N6L1 136 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 AKR1E2Q96JD6 320 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 BMFQ96LC9 184 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 NSUN3Q9H649 340 aaKnown RBP11.76□□□□□ -0.53
SLX4-201ENST00000294008 SQORQ9Y6N5 450 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 ANKRD61A6NGH8 418 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 HSD17B6O14756 317 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 GABRDO14764 452 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 HOXB5P09067 269 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 SNRPD2P62316 118 aaKnown RBP11.76□□□□□ -0.53
SLX4-201ENST00000294008 RAC1P63000 192 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 ZNF33AQ06730 810 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 Q6ZSR6 202 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 BAGE3Q86Y29 109 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 BAGE2Q86Y30 109 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 OR52N2Q8NGI0 321 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 DNAJB8Q8NHS0 232 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 ALOXE3Q9BYJ1 711 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 MEIOCA2RUB1 952 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 SMIM17P0DL12 118 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 SOX9P48436 509 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 SLC18A1P54219 525 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 GAB1Q13480 694 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 CST6Q15828 149 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 FAM111BQ6SJ93 734 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 PINX1Q96BK5 328 aaKnown RBP11.76□□□□□ -0.53
SLX4-201ENST00000294008 FUCA2Q9BTY2 467 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 CD244Q9BZW8 370 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 SDCBP2Q9H190 292 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 ERVMER34-1Q9H9K5 563 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 C20orf202A1L168 122 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 ZNF888P0CJ79 500 aaPredicted RBP11.76□□□□□ -0.53
SLX4-201ENST00000294008 CLDN2P57739 230 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 TIGD3Q6B0B8 471 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 OR1M1Q8NGA1 313 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 C10orf82Q8WW14 230 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 CTRCQ99895 268 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 GAL3ST2Q9H3Q3 398 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 C8orf33Q9H7E9 229 aaPredicted RBP11.76□□□□□ -0.53
SLX4-201ENST00000294008 KCNIP2Q9NS61 270 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 GIMAP2Q9UG22 337 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 NOSIPQ9Y314 301 aaKnown RBP11.76□□□□□ -0.53
SLX4-201ENST00000294008 NEXMIFQ5QGS0 1516 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 LRRC30A6NM36 301 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 FANCGO15287 622 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 C4BPAP04003 597 aaKnown RBP11.76□□□□□ -0.53
SLX4-201ENST00000294008 RETP07949 1114 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 KIR2DL3P43628 341 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 GLO1Q04760 184 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 FOXC1Q12948 553 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 TMEFF1Q8IYR6 380 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 ADGRF3Q8IZF5 1079 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 CANT1Q8WVQ1 401 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 MYLIPQ8WY64 445 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 MAL2Q969L2 176 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 KREMEN1Q96MU8 473 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 UTP23Q9BRU9 249 aaKnown RBP11.76□□□□□ -0.53
SLX4-201ENST00000294008 TMEM175Q9BSA9 504 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 ACOXLQ9NUZ1 547 aa11.76□□□□□ -0.53
SLX4-201ENST00000294008 BOKQ9UMX3 212 aaPredicted RBP11.76□□□□□ -0.53
SLX4-201ENST00000294008 ZNF732B4DXR9 585 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 RFPL1O75677 317 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 CLDN1O95832 211 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 SCGB1C2P0DMR2 95 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 CBR1P16152 277 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 BCKDHBP21953 392 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 NPY1RP25929 384 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 CXCL12P48061 93 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 DAP3P51398 398 aaKnown RBP11.75□□□□□ -0.53
SLX4-201ENST00000294008 PLAURQ03405 335 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 ALKBH6Q3KRA9 238 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 BEX5Q5H9J7 111 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 TCEAL2Q9H3H9 227 aaPredicted RBP11.75□□□□□ -0.53
SLX4-201ENST00000294008 KCNMB3Q9NPA1 279 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 KDM4EB2RXH2 506 aaPredicted RBP11.75□□□□□ -0.53
SLX4-201ENST00000294008 ITM2AO43736 263 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 GLB1P16278 677 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 NTSR1P30989 418 aa11.75□□□□□ -0.53
SLX4-201ENST00000294008 CDKN2BP42772 138 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms