RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 COL26A1Q96A83 441 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 NUDT22Q9BRQ3 303 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 TAPBPLQ9BX59 468 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 CPNE5Q9HCH3 593 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 U3KQA8 63 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 A0A087WV62 115 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 SLC28A2O43868 658 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 CTNSO60931 367 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 SLC35E2P0CK97 266 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 MYF5P13349 255 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 POU2F1P14859 743 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 CSTF2P33240 577 aaKnown RBP eCLIP15.63■□□□□ 0.09
CPSF4-201ENST00000292476 S100A5P33763 92 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 SOX6P35712 828 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 GRK6P43250 576 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 PRKAG1P54619 331 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 HSD17B7P56937 341 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 RPS26P62854 115 aaKnown RBP15.63■□□□□ 0.09
CPSF4-201ENST00000292476 SNRPNP63162 240 aaKnown RBP15.63■□□□□ 0.09
CPSF4-201ENST00000292476 PGBD2Q6P3X8 592 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 ZCCHC12Q6PEW1 402 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 OR8J1Q8NGP2 316 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 IFI44Q8TCB0 444 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 MS4A4EQ96PG1 132 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 MGLLQ99685 303 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 TREX2Q9BQ50 279 aaPredicted RBP15.63■□□□□ 0.09
CPSF4-201ENST00000292476 PELOQ9BRX2 385 aaKnown RBP15.63■□□□□ 0.09
CPSF4-201ENST00000292476 CDADC1Q9BWV3 514 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 SPRTNQ9H040 489 aaPredicted RBP15.63■□□□□ 0.09
CPSF4-201ENST00000292476 CALML5Q9NZT1 146 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 TRPC4Q9UBN4 977 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 SRPK3Q9UPE1 567 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 LIPT1Q9Y234 373 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 SLC9A8Q9Y2E8 581 aa15.63■□□□□ 0.09
CPSF4-201ENST00000292476 RPL36Q9Y3U8 105 aaKnown RBP15.63■□□□□ 0.09
CPSF4-201ENST00000292476 CNOT1A5YKK6 2376 aaKnown RBP15.63■□□□□ 0.09
CPSF4-201ENST00000292476 PNMA8CA0A1B0GUJ8 204 aa15.62■□□□□ 0.09
CPSF4-201ENST00000292476 SYNDIG1LA6NDD5 238 aa15.62■□□□□ 0.09
CPSF4-201ENST00000292476 A8MU76 341 aa15.62■□□□□ 0.09
CPSF4-201ENST00000292476 DSCR3O14972 297 aa15.62■□□□□ 0.09
CPSF4-201ENST00000292476 CASC3O15234 703 aaKnown RBP15.62■□□□□ 0.09
CPSF4-201ENST00000292476 UGT2B17O75795 530 aa15.62■□□□□ 0.09
CPSF4-201ENST00000292476 SNX4O95219 450 aa15.62■□□□□ 0.09
CPSF4-201ENST00000292476 HMGN2P05204 90 aaKnown RBP15.62■□□□□ 0.09
CPSF4-201ENST00000292476 MC3RP41968 323 aa15.62■□□□□ 0.09
CPSF4-201ENST00000292476 NOVA1P51513 510 aaKnown RBP15.62■□□□□ 0.09
CPSF4-201ENST00000292476 CRISP3P54108 245 aa15.62■□□□□ 0.09
CPSF4-201ENST00000292476 CCL7P80098 99 aa15.62■□□□□ 0.09
CPSF4-201ENST00000292476 KRR1Q13601 381 aaKnown RBP15.62■□□□□ 0.09
CPSF4-201ENST00000292476 ZNF750Q32MQ0 723 aa15.62■□□□□ 0.09
CPSF4-201ENST00000292476 ATAD3BQ5T9A4 648 aa15.62■□□□□ 0.09
CPSF4-201ENST00000292476 MED25Q71SY5 747 aa15.62■□□□□ 0.09
CPSF4-201ENST00000292476 BPHLQ86WA6 291 aaPredicted RBP15.62■□□□□ 0.09
CPSF4-201ENST00000292476 OR2L13Q8N349 312 aa15.62■□□□□ 0.09
CPSF4-201ENST00000292476 TRNT1Q96Q11 434 aaKnown RBP15.62■□□□□ 0.09
CPSF4-201ENST00000292476 ACTRT3Q9BYD9 372 aa15.62■□□□□ 0.09
CPSF4-201ENST00000292476 OR51I1Q9H343 314 aa15.62■□□□□ 0.09
CPSF4-201ENST00000292476 SERHL2Q9H4I8 314 aa15.62■□□□□ 0.09
CPSF4-201ENST00000292476 FGF21Q9NSA1 209 aa15.62■□□□□ 0.09
CPSF4-201ENST00000292476 RHCGQ9UBD6 479 aa15.62■□□□□ 0.09
CPSF4-201ENST00000292476 H3BMH7 237 aa15.61■□□□□ 0.09
CPSF4-201ENST00000292476 FGF17O60258 216 aa15.61■□□□□ 0.09
CPSF4-201ENST00000292476 OR10H3O60404 316 aa15.61■□□□□ 0.09
CPSF4-201ENST00000292476 PLOD3O60568 738 aa15.61■□□□□ 0.09
CPSF4-201ENST00000292476 DNAJB6O75190 326 aa15.61■□□□□ 0.09
CPSF4-201ENST00000292476 SCG5P05408 212 aa15.61■□□□□ 0.09
CPSF4-201ENST00000292476 CTSBP07858 339 aa15.61■□□□□ 0.09
CPSF4-201ENST00000292476 GRK5P34947 590 aa15.61■□□□□ 0.09
CPSF4-201ENST00000292476 STX4Q12846 297 aa15.61■□□□□ 0.09
CPSF4-201ENST00000292476 SLC13A2Q13183 592 aa15.61■□□□□ 0.09
CPSF4-201ENST00000292476 SERTAD2Q14140 314 aa15.61■□□□□ 0.09
CPSF4-201ENST00000292476 KCNAB1Q14722 419 aa15.61■□□□□ 0.09
CPSF4-201ENST00000292476 SEC23BQ15437 767 aa15.61■□□□□ 0.09
CPSF4-201ENST00000292476 GPR19Q15760 415 aa15.61■□□□□ 0.09
CPSF4-201ENST00000292476 MFSD4BQ5TF39 518 aa15.61■□□□□ 0.09
CPSF4-201ENST00000292476 CASP12Q6UXS9 341 aa15.61■□□□□ 0.09
CPSF4-201ENST00000292476 ATCAYQ86WG3 371 aa15.61■□□□□ 0.09
CPSF4-201ENST00000292476 GALNT6Q8NCL4 622 aa15.61■□□□□ 0.09
CPSF4-201ENST00000292476 RAB8BQ92930 207 aa15.61■□□□□ 0.09
CPSF4-201ENST00000292476 RBM18Q96H35 190 aaKnown RBP15.61■□□□□ 0.09
CPSF4-201ENST00000292476 ZNF578Q96N58 590 aaPredicted RBP15.61■□□□□ 0.09
CPSF4-201ENST00000292476 OR1F2PQ96R84 312 aa15.61■□□□□ 0.09
CPSF4-201ENST00000292476 POLR2J3Q9H1A7 115 aaKnown RBP15.61■□□□□ 0.09
CPSF4-201ENST00000292476 OR51E2Q9H255 320 aa15.61■□□□□ 0.09
CPSF4-201ENST00000292476 PRTFDC1Q9NRG1 225 aa15.61■□□□□ 0.09
CPSF4-201ENST00000292476 A4GNTQ9UNA3 340 aa15.61■□□□□ 0.09
CPSF4-201ENST00000292476 LSM2Q9Y333 95 aaKnown RBP15.61■□□□□ 0.09
CPSF4-201ENST00000292476 SPTBN2O15020 2390 aa15.61■□□□□ 0.09
CPSF4-201ENST00000292476 A0A075B6Q4 140 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 FLRT2O43155 660 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 OR10H2O60403 315 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 LDB3O75112 727 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 SEMA7AO75326 666 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 MED26O95402 600 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 GP1BAP07359 652 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 NR2F1P10589 423 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 DBTP11182 482 aaKnown RBP15.6■□□□□ 0.09
CPSF4-201ENST00000292476 FOLR1P15328 257 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 NT5EP21589 574 aa15.6■□□□□ 0.09
CPSF4-201ENST00000292476 TGFBR1P36897 503 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms