RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 MMP28Q9H239 520 aa9.39□□□□□ -0.91
HMGCR-201ENST00000287936 CLEC4MQ9H2X3 399 aaPredicted RBP9.39□□□□□ -0.91
HMGCR-201ENST00000287936 THBS1P07996 1170 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 CLEC2LP0C7M8 214 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 IGFALSP35858 605 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 RNF144AP50876 292 aaPredicted RBP9.38□□□□□ -0.91
HMGCR-201ENST00000287936 VSX2P58304 361 aaPredicted RBP9.38□□□□□ -0.91
HMGCR-201ENST00000287936 RAB14P61106 215 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 ACTA2P62736 377 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 ACTG2P63267 376 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 OR1Q1Q15612 314 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 BAIAP2L2Q6UXY1 529 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 RSPRY1Q96DX4 576 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 SLC7A5P2Q9GIP4 190 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 SLC38A1Q9H2H9 487 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 SPHK1Q9NYA1 384 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 APOBEC3BQ9UH17 382 aaKnown RBP9.38□□□□□ -0.91
HMGCR-201ENST00000287936 KLHL21Q9UJP4 597 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 SPINT1O43278 529 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 GPR75O95800 540 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 MRPL3P09001 348 aaKnown RBP9.38□□□□□ -0.91
HMGCR-201ENST00000287936 CRYBB2P43320 205 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 ARHGAP11BQ3KRB8 267 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 ZNF620Q6ZNG0 422 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 ASB18Q6ZVZ8 466 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 RNF44Q7L0R7 432 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 UBQLNLQ8IYU4 475 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 TOMM5Q8N4H5 51 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 SLC16A11Q8NCK7 471 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 SLC35A4Q96G79 324 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 SNX18Q96RF0 628 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 POLMQ9NP87 494 aaPredicted RBP9.38□□□□□ -0.91
HMGCR-201ENST00000287936 DSPPQ9NZW4 1301 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 NDOR1Q9UHB4 597 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 A0A0J9YY10 115 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 A0A1W2PPV9 198 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 GXYLT2A0PJZ3 443 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 KDM4EB2RXH2 506 aaPredicted RBP9.38□□□□□ -0.91
HMGCR-201ENST00000287936 FLRT2O43155 660 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 SSNA1O43805 119 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 EDNRAP25101 427 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 ERP29P30040 261 aaKnown RBP9.38□□□□□ -0.91
HMGCR-201ENST00000287936 SELENBP1Q13228 472 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 ATAD3CQ5T2N8 411 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 ZNF836Q6ZNA1 936 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 UBE3DQ7Z6J8 389 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 PARGQ86W56 976 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 AMER3Q8N944 861 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 TP53I13Q8NBR0 393 aaPredicted RBP9.38□□□□□ -0.91
HMGCR-201ENST00000287936 OR5W2Q8NH69 310 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 ADAMTS18Q8TE60 1221 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 PMM1Q92871 262 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 KCTD12Q96CX2 325 aaKnown RBP9.38□□□□□ -0.91
HMGCR-201ENST00000287936 BPIFA2Q96DR5 249 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 ERMAPQ96PL5 475 aaPredicted RBP9.38□□□□□ -0.91
HMGCR-201ENST00000287936 TP63Q9H3D4 680 aaPredicted RBP9.38□□□□□ -0.91
HMGCR-201ENST00000287936 FGF22Q9HCT0 170 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 POU2F3Q9UKI9 436 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 CLEC4AQ9UMR7 237 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 ELOA3DA6NLF2 546 aaPredicted RBP9.38□□□□□ -0.91
HMGCR-201ENST00000287936 AGRPO00253 132 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 PPM1DO15297 605 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 HPGDSO60760 199 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 REM1O75628 298 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 UGT2B7P16662 529 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 CLDN2P57739 230 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 BIKQ13323 160 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 PRSS53Q2L4Q9 553 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 ELOA3BQ3SY89 546 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 MRPL2Q5T653 305 aaKnown RBP9.38□□□□□ -0.91
HMGCR-201ENST00000287936 SYCE2Q6PIF2 218 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 NKAIN4Q8IVV8 208 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 SLC37A3Q8NCC5 494 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 ELOA3Q8NG57 546 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 TMEM255BQ8WV15 326 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 AKAP1Q92667 903 aaKnown RBP eCLIP9.38□□□□□ -0.918e-7■■■■□ 22.5
HMGCR-201ENST00000287936 SGTBQ96EQ0 304 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 LRRC3BQ96PB8 259 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 PRR14Q9BWN1 585 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 SRRQ9GZT4 340 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 POLE3Q9NRF9 147 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 CLCA3PQ9Y6N3 262 aa9.38□□□□□ -0.91
HMGCR-201ENST00000287936 PRAMEF25A6NGN4 478 aa9.37□□□□□ -0.91
HMGCR-201ENST00000287936 ITGA10O75578 1167 aa9.37□□□□□ -0.91
HMGCR-201ENST00000287936 TACSTD2P09758 323 aa9.37□□□□□ -0.91
HMGCR-201ENST00000287936 RNH1P13489 461 aaKnown RBP9.37□□□□□ -0.91
HMGCR-201ENST00000287936 DRD3P35462 400 aa9.37□□□□□ -0.91
HMGCR-201ENST00000287936 DDOSTP39656 456 aa9.37□□□□□ -0.91
HMGCR-201ENST00000287936 MTNR1BP49286 362 aa9.37□□□□□ -0.91
HMGCR-201ENST00000287936 WASH2PQ6VEQ5 465 aa9.37□□□□□ -0.91
HMGCR-201ENST00000287936 ATCAYQ86WG3 371 aa9.37□□□□□ -0.91
HMGCR-201ENST00000287936 FBXL6Q8N531 539 aa9.37□□□□□ -0.91
HMGCR-201ENST00000287936 ZNF527Q8NB42 609 aa9.37□□□□□ -0.91
HMGCR-201ENST00000287936 MOSPD2Q8NHP6 518 aa9.37□□□□□ -0.91
HMGCR-201ENST00000287936 TMEM246Q9BRR3 403 aa9.37□□□□□ -0.91
HMGCR-201ENST00000287936 ARHGAP9Q9BRR9 750 aa9.37□□□□□ -0.91
HMGCR-201ENST00000287936 LYRM4Q9HD34 91 aa9.37□□□□□ -0.91
HMGCR-201ENST00000287936 SIDT1Q9NXL6 827 aaKnown RBP9.37□□□□□ -0.91
HMGCR-201ENST00000287936 GNB5O14775 395 aa9.37□□□□□ -0.91
HMGCR-201ENST00000287936 RNF13O43567 381 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms