RNA–Protein interactions for RNA: ENST00000278460.11

C11orf49-201, Transcript of chromosome 11 open reading frame 49, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C11orf49, Length 1,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-201ENST00000278460 LRFN5Q96NI6 719 aa18■□□□□ 0.47
C11orf49-201ENST00000278460 UCK2Q9BZX2 261 aa18■□□□□ 0.47
C11orf49-201ENST00000278460 NXF5Q9H1B4 397 aaKnown RBP18■□□□□ 0.47
C11orf49-201ENST00000278460 WDFY4Q6ZS81 3184 aa18■□□□□ 0.47
C11orf49-201ENST00000278460 A0A087WXM4 84 aa17.99■□□□□ 0.47
C11orf49-201ENST00000278460 C2orf92A0A1B0GVN3 265 aa17.99■□□□□ 0.47
C11orf49-201ENST00000278460 B4E171 279 aa17.99■□□□□ 0.47
C11orf49-201ENST00000278460 ALOX12BO75342 701 aa17.99■□□□□ 0.47
C11orf49-201ENST00000278460 IL33O95760 270 aa17.99■□□□□ 0.47
C11orf49-201ENST00000278460 TFAP2AP05549 437 aa17.99■□□□□ 0.47
C11orf49-201ENST00000278460 CCL4P13236 92 aa17.99■□□□□ 0.47
C11orf49-201ENST00000278460 GGT2P36268 569 aa17.99■□□□□ 0.47
C11orf49-201ENST00000278460 TSPAN7P41732 249 aa17.99■□□□□ 0.47
C11orf49-201ENST00000278460 PLAURQ03405 335 aa17.99■□□□□ 0.47
C11orf49-201ENST00000278460 CDK5R2Q13319 367 aa17.99■□□□□ 0.47
C11orf49-201ENST00000278460 C1orf94Q6P1W5 598 aa17.99■□□□□ 0.47
C11orf49-201ENST00000278460 CD300LDQ6UXZ3 194 aa17.99■□□□□ 0.47
C11orf49-201ENST00000278460 GDF7Q7Z4P5 450 aa17.99■□□□□ 0.47
C11orf49-201ENST00000278460 SUMF1Q8NBK3 374 aa17.99■□□□□ 0.47
C11orf49-201ENST00000278460 EDEM2Q9BV94 578 aa17.99■□□□□ 0.47
C11orf49-201ENST00000278460 HOXD1Q9GZZ0 328 aa17.99■□□□□ 0.47
C11orf49-201ENST00000278460 AKAP7Q9P0M2 348 aaPredicted RBP17.99■□□□□ 0.47
C11orf49-201ENST00000278460 REV1Q9UBZ9 1251 aa17.99■□□□□ 0.47
C11orf49-201ENST00000278460 MRTO4Q9UKD2 239 aaKnown RBP17.99■□□□□ 0.47
C11orf49-201ENST00000278460 NTNG1Q9Y2I2 539 aa17.99■□□□□ 0.47
C11orf49-201ENST00000278460 PCDHGA6Q9Y5G7 932 aa17.99■□□□□ 0.47
C11orf49-201ENST00000278460 A0A087WUU8 490 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 TRAPPC13A5PLN9 417 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 PRR33A8MZF0 331 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 GDF9O60383 454 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 CBFA2T3O75081 653 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 OSMP13725 252 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 PRG2P13727 222 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 ATP6V1B1P15313 513 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 IFNGR2P38484 337 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 RPL5P46777 297 aaKnown RBP17.98■□□□□ 0.47
C11orf49-201ENST00000278460 GPR143P51810 404 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 EMP2P54851 167 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 COX10Q12887 443 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 LAIR2Q6ISS4 152 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 MRPL14Q6P1L8 145 aaKnown RBP17.98■□□□□ 0.47
C11orf49-201ENST00000278460 SLC29A4Q7RTT9 530 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 C9orf40Q8IXQ3 194 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 ZNF614Q8N883 585 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 METTL21AQ8WXB1 218 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 ACOT11Q8WXI4 607 aaPredicted RBP17.98■□□□□ 0.47
C11orf49-201ENST00000278460 ZNF566Q969W8 418 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 SPSB2Q99619 263 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 ZNF559Q9BR84 538 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 TMEM9BQ9NQ34 198 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 TO15178 435 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 CNOT3O75175 753 aaKnown RBP17.98■□□□□ 0.47
C11orf49-201ENST00000278460 BCAS1O75363 584 aaPredicted RBP17.98■□□□□ 0.47
C11orf49-201ENST00000278460 THY1P04216 161 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 GKN3PP0CG01 181 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 ZNF28P17035 718 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 MMP11P24347 488 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 HTR2AP28223 471 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 LCN1P31025 176 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 HLCSP50747 726 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 CRISP1P54107 249 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 NR1H2P55055 460 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 CDH15P55291 814 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 E2F1Q01094 437 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 TARDBPQ13148 414 aaKnown RBP eCLIP17.98■□□□□ 0.47
C11orf49-201ENST00000278460 ILKQ13418 452 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 MAD2L1BPQ15013 274 aaPredicted RBP17.98■□□□□ 0.47
C11orf49-201ENST00000278460 HLA-DQA1Q5Y7H0 255 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 FAAH2Q6GMR7 532 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 LCN10Q6JVE6 187 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 CCDC71Q8IV32 467 aaPredicted RBP17.98■□□□□ 0.47
C11orf49-201ENST00000278460 C17orf47Q8NEP4 570 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 CNOT9Q92600 299 aaKnown RBP17.98■□□□□ 0.47
C11orf49-201ENST00000278460 CMKLR1Q99788 373 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 WWTR1Q9GZV5 400 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 WDR54Q9H977 334 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 DNAJB12Q9NXW2 375 aaKnown RBP17.98■□□□□ 0.47
C11orf49-201ENST00000278460 SLC39A1Q9NY26 324 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 BLOC1S6Q9UL45 172 aa17.98■□□□□ 0.47
C11orf49-201ENST00000278460 FRYLO94915 3013 aa17.97■□□□□ 0.47
C11orf49-201ENST00000278460 SAGE2PA6NJ88 616 aa17.97■□□□□ 0.47
C11orf49-201ENST00000278460 ZAR1LA6NP61 321 aa17.97■□□□□ 0.47
C11orf49-201ENST00000278460 CCDC159P0C7I6 412 aa17.97■□□□□ 0.47
C11orf49-201ENST00000278460 CRHBPP24387 322 aa17.97■□□□□ 0.47
C11orf49-201ENST00000278460 SLC5A2P31639 672 aa17.97■□□□□ 0.47
C11orf49-201ENST00000278460 FOXL2P58012 376 aa17.97■□□□□ 0.47
C11orf49-201ENST00000278460 GABARAPL2P60520 117 aa17.97■□□□□ 0.47
C11orf49-201ENST00000278460 CXCR4P61073 352 aa17.97■□□□□ 0.47
C11orf49-201ENST00000278460 ALDH6A1Q02252 535 aaKnown RBP17.97■□□□□ 0.47
C11orf49-201ENST00000278460 OR1Q1Q15612 314 aa17.97■□□□□ 0.47
C11orf49-201ENST00000278460 Q6ZPB1 254 aaPredicted RBP17.97■□□□□ 0.47
C11orf49-201ENST00000278460 ZER1Q7Z7L7 766 aa17.97■□□□□ 0.47
C11orf49-201ENST00000278460 GAL3ST4Q96RP7 486 aa17.97■□□□□ 0.47
C11orf49-201ENST00000278460 LMF1Q96S06 567 aa17.97■□□□□ 0.47
C11orf49-201ENST00000278460 SEMA4CQ9C0C4 833 aa17.97■□□□□ 0.47
C11orf49-201ENST00000278460 ADNPQ9H2P0 1102 aa17.97■□□□□ 0.47
C11orf49-201ENST00000278460 NXT1Q9UKK6 140 aaKnown RBP17.97■□□□□ 0.47
C11orf49-201ENST00000278460 PPIEQ9UNP9 301 aaKnown RBP17.97■□□□□ 0.47
C11orf49-201ENST00000278460 PCNX2A6NKB5 2137 aa17.96■□□□□ 0.47
C11orf49-201ENST00000278460 SERINC4A6NH21 518 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms